RNA–Protein interactions for RNA: ENST00000602164.5

USF2-215, Transcript of upstream transcription factor 2, c-fos interacting, human

TSL 3

Gene USF2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USF2-215	ENST00000602164	JAG2	Q9Y219	1238 aa		33.26	■■■□□ 2.91
USF2-215	ENST00000602164	APLP1	P51693	650 aa		33.25	■■■□□ 2.91
USF2-215	ENST00000602164	RRP1	P56182	461 aa	Known RBP	33.25	■■■□□ 2.91
USF2-215	ENST00000602164	RBM26	Q5T8P6	1007 aa	Known RBP	33.24	■■■□□ 2.91
USF2-215	ENST00000602164	VPS37D	Q86XT2	251 aa		33.24	■■■□□ 2.91
USF2-215	ENST00000602164	MYOZ2	Q9NPC6	264 aa		33.24	■■■□□ 2.91
USF2-215	ENST00000602164	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	33.24	■■■□□ 2.91
USF2-215	ENST00000602164	NOP58	Q9Y2X3	529 aa	Known RBP	33.24	■■■□□ 2.91
USF2-215	ENST00000602164	G3BP1	Q13283	466 aa	Known RBP eCLIP	33.23	■■■□□ 2.91
USF2-215	ENST00000602164	KIAA0825	Q8IV33	1275 aa		33.23	■■■□□ 2.91
USF2-215	ENST00000602164	COL1A1	P02452	1464 aa	Predicted RBP	33.23	■■■□□ 2.91
USF2-215	ENST00000602164	ADORA1	P30542	326 aa		33.22	■■■□□ 2.91
USF2-215	ENST00000602164	MMP14	P50281	582 aa		33.21	■■■□□ 2.91
USF2-215	ENST00000602164	CHMP4B	Q9H444	224 aa	Known RBP	33.21	■■■□□ 2.91
USF2-215	ENST00000602164	ASTN2	O75129	1339 aa	Predicted RBP	33.21	■■■□□ 2.91
USF2-215	ENST00000602164		A0A1B0GUL7	405 aa		33.2	■■■□□ 2.91
USF2-215	ENST00000602164	SIRT2	Q8IXJ6	389 aa		33.2	■■■□□ 2.91
USF2-215	ENST00000602164	SURF6	O75683	361 aa	Known RBP	33.19	■■■□□ 2.9
USF2-215	ENST00000602164	TIMM10	P62072	90 aa		33.19	■■■□□ 2.9
USF2-215	ENST00000602164	HTRA3	P83110	453 aa		33.19	■■■□□ 2.9
USF2-215	ENST00000602164	MFSD14B	Q5SR56	506 aa		33.19	■■■□□ 2.9
USF2-215	ENST00000602164	OGFOD1	Q8N543	542 aa		33.19	■■■□□ 2.9
USF2-215	ENST00000602164	AKAP2	Q9Y2D5	859 aa		33.19	■■■□□ 2.9
USF2-215	ENST00000602164	MYH13	Q9UKX3	1938 aa		33.19	■■■□□ 2.9
USF2-215	ENST00000602164	ZBTB22	O15209	634 aa		33.18	■■■□□ 2.9
USF2-215	ENST00000602164	PHKA1	P46020	1223 aa		33.18	■■■□□ 2.9
USF2-215	ENST00000602164	FMR1	Q06787	632 aa	Known RBP eCLIP	33.18	■■■□□ 2.9
USF2-215	ENST00000602164	RPAP2	Q8IXW5	612 aa	Predicted RBP	33.18	■■■□□ 2.9
USF2-215	ENST00000602164	ZBED3	Q96IU2	234 aa	Predicted RBP	33.18	■■■□□ 2.9
USF2-215	ENST00000602164	GLIS2	Q9BZE0	524 aa	Predicted RBP	33.18	■■■□□ 2.9
USF2-215	ENST00000602164	CEP350	Q5VT06	3117 aa		33.17	■■■□□ 2.9
USF2-215	ENST00000602164	TRAF5	O00463	557 aa		33.17	■■■□□ 2.9
USF2-215	ENST00000602164	SCARF1	Q14162	830 aa		33.17	■■■□□ 2.9
USF2-215	ENST00000602164	CHAF1A	Q13111	956 aa	Predicted RBP	33.16	■■■□□ 2.9
USF2-215	ENST00000602164	GGA3	Q9NZ52	723 aa		33.16	■■■□□ 2.9
USF2-215	ENST00000602164	HDAC9	Q9UKV0	1011 aa		33.16	■■■□□ 2.9
USF2-215	ENST00000602164	GRIK5	Q16478	980 aa		33.15	■■■□□ 2.9
USF2-215	ENST00000602164	CCDC102B	Q68D86	513 aa		33.15	■■■□□ 2.9
USF2-215	ENST00000602164	XAGE2	Q96GT9	111 aa		33.15	■■■□□ 2.9
USF2-215	ENST00000602164	GPR108	Q9NPR9	543 aa		33.15	■■■□□ 2.9
USF2-215	ENST00000602164		F8W031	263 aa	Predicted RBP	33.14	■■■□□ 2.9
USF2-215	ENST00000602164	WNT10B	O00744	389 aa		33.14	■■■□□ 2.9
USF2-215	ENST00000602164	FRAT2	O75474	233 aa	Predicted RBP	33.14	■■■□□ 2.9
USF2-215	ENST00000602164	NBPF9	Q3BBW0	867 aa		33.14	■■■□□ 2.9
USF2-215	ENST00000602164	CDC37L1	Q7L3B6	337 aa		33.14	■■■□□ 2.9
USF2-215	ENST00000602164	POLR2A	P24928	1970 aa	Known RBP	33.13	■■■□□ 2.89
USF2-215	ENST00000602164	OS9	Q13438	667 aa	Predicted RBP	33.13	■■■□□ 2.89
USF2-215	ENST00000602164	MTMR14	Q8NCE2	650 aa		33.13	■■■□□ 2.89
USF2-215	ENST00000602164	TBC1D22A	Q8WUA7	517 aa		33.13	■■■□□ 2.89
USF2-215	ENST00000602164	TRPM7	Q96QT4	1865 aa		33.13	■■■□□ 2.89
USF2-215	ENST00000602164	ANGEL2	Q5VTE6	544 aa	Known RBP	33.12	■■■□□ 2.89
USF2-215	ENST00000602164	CREBZF	Q9NS37	354 aa		33.12	■■■□□ 2.89
USF2-215	ENST00000602164	EXOC6B	Q9Y2D4	811 aa		33.12	■■■□□ 2.89
USF2-215	ENST00000602164	PITPNM2	Q9BZ72	1349 aa		33.11	■■■□□ 2.89
USF2-215	ENST00000602164	TNNI3K	Q59H18	835 aa		33.11	■■■□□ 2.89
USF2-215	ENST00000602164	DCPS	Q96C86	337 aa	Known RBP	33.11	■■■□□ 2.89
USF2-215	ENST00000602164	GNL3L	Q9NVN8	582 aa	Known RBP	33.11	■■■□□ 2.89
USF2-215	ENST00000602164	PCDHAC2	Q9Y5I4	1007 aa		33.11	■■■□□ 2.89
USF2-215	ENST00000602164	FPGT-TNNI3K	V9GXZ4	949 aa		33.11	■■■□□ 2.89
USF2-215	ENST00000602164	SEMA3E	O15041	775 aa		33.1	■■■□□ 2.89
USF2-215	ENST00000602164	DLK2	Q6UY11	383 aa		33.1	■■■□□ 2.89
USF2-215	ENST00000602164	KRT26	Q7Z3Y9	468 aa		33.1	■■■□□ 2.89
USF2-215	ENST00000602164	USP48	Q86UV5	1035 aa		33.1	■■■□□ 2.89
USF2-215	ENST00000602164	DNAJC5G	Q8N7S2	189 aa		33.1	■■■□□ 2.89
USF2-215	ENST00000602164	ADM5	C9JUS6	153 aa		33.09	■■■□□ 2.89
USF2-215	ENST00000602164	NEUROD6	Q96NK8	337 aa		33.09	■■■□□ 2.89
USF2-215	ENST00000602164	TTF2	Q9UNY4	1162 aa	Known RBP	33.09	■■■□□ 2.89
USF2-215	ENST00000602164	ECM29	Q5VYK3	1845 aa		33.08	■■■□□ 2.89
USF2-215	ENST00000602164	TMEM88B	A6NKF7	163 aa		33.08	■■■□□ 2.89
USF2-215	ENST00000602164	HMMR	O75330	724 aa		33.08	■■■□□ 2.89
USF2-215	ENST00000602164	RASGRF1	Q13972	1273 aa		33.08	■■■□□ 2.89
USF2-215	ENST00000602164	CST9	Q5W186	159 aa		33.08	■■■□□ 2.89
USF2-215	ENST00000602164	WDR66	Q8TBY9	1149 aa		33.08	■■■□□ 2.89
USF2-215	ENST00000602164	PDS5A	Q29RF7	1337 aa	Known RBP	33.07	■■■□□ 2.88
USF2-215	ENST00000602164	DLGAP5	Q15398	846 aa		33.07	■■■□□ 2.88
USF2-215	ENST00000602164	CFAP100	Q494V2	611 aa		33.07	■■■□□ 2.88
USF2-215	ENST00000602164	DENND2A	Q9ULE3	1009 aa		33.07	■■■□□ 2.88
USF2-215	ENST00000602164	AOX1	Q06278	1338 aa		33.06	■■■□□ 2.88
USF2-215	ENST00000602164	SALL1	Q9NSC2	1324 aa		33.06	■■■□□ 2.88
USF2-215	ENST00000602164	SPDYE2B	A6NHP3	402 aa		33.06	■■■□□ 2.88
USF2-215	ENST00000602164	SPDYE6	P0CI01	402 aa		33.06	■■■□□ 2.88
USF2-215	ENST00000602164	SERPINA10	Q9UK55	444 aa		33.06	■■■□□ 2.88
USF2-215	ENST00000602164	SUGT1	Q9Y2Z0	365 aa		33.06	■■■□□ 2.88
USF2-215	ENST00000602164	SULF1	Q8IWU6	871 aa		33.05	■■■□□ 2.88
USF2-215	ENST00000602164	ARID4A	P29374	1257 aa	Predicted RBP	33.04	■■■□□ 2.88
USF2-215	ENST00000602164	HSP90AB4P	Q58FF6	505 aa		33.04	■■■□□ 2.88
USF2-215	ENST00000602164	ERC1	Q8IUD2	1116 aa		33.04	■■■□□ 2.88
USF2-215	ENST00000602164	DBNDD2	Q9BQY9	259 aa		33.04	■■■□□ 2.88
USF2-215	ENST00000602164	EAF2	Q96CJ1	260 aa	Predicted RBP	33.03	■■■□□ 2.88
USF2-215	ENST00000602164	PRMT6	Q96LA8	375 aa	Predicted RBP	33.03	■■■□□ 2.88
USF2-215	ENST00000602164	CRBN	Q96SW2	442 aa		33.03	■■■□□ 2.88
USF2-215	ENST00000602164	CRK	P46108	304 aa		33.02	■■■□□ 2.88
USF2-215	ENST00000602164	HDLBP	Q00341	1268 aa	Known RBP	33.02	■■■□□ 2.88
USF2-215	ENST00000602164	TLR7	Q9NYK1	1049 aa	Known RBP	33.02	■■■□□ 2.88
USF2-215	ENST00000602164	DBNL	Q9UJU6	430 aa	Known RBP	33.02	■■■□□ 2.88
USF2-215	ENST00000602164	SCAF8	Q9UPN6	1271 aa	Known RBP	33.02	■■■□□ 2.88
USF2-215	ENST00000602164	CELF2	O95319	508 aa	Known RBP	33.01	■■■□□ 2.87
USF2-215	ENST00000602164	PRDX5	P30044	214 aa		33.01	■■■□□ 2.87
USF2-215	ENST00000602164	RHPN1	Q8TCX5	695 aa		33.01	■■■□□ 2.87
USF2-215	ENST00000602164	GORAB	Q5T7V8	394 aa		33	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms