RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 CHD1LQ86WJ1 897 aa17.76■□□□□ 0.43
USE1-210ENST00000601662 JAG2Q9Y219 1238 aa17.76■□□□□ 0.43
USE1-210ENST00000601662 IRS2Q9Y4H2 1338 aa17.75■□□□□ 0.43
USE1-210ENST00000601662 PDE8BO95263 885 aa17.75■□□□□ 0.43
USE1-210ENST00000601662 DACT2Q5SW24 774 aa17.75■□□□□ 0.43
USE1-210ENST00000601662 STRIP1Q5VSL9 837 aa17.75■□□□□ 0.43
USE1-210ENST00000601662 ATG9AQ7Z3C6 839 aa17.75■□□□□ 0.43
USE1-210ENST00000601662 CLASRPQ8N2M8 674 aaKnown RBP17.75■□□□□ 0.43
USE1-210ENST00000601662 AGBL3Q8NEM8 1001 aa17.75■□□□□ 0.43
USE1-210ENST00000601662 APBB1O00213 710 aa17.74■□□□□ 0.43
USE1-210ENST00000601662 SASH1O94885 1247 aa17.74■□□□□ 0.43
USE1-210ENST00000601662 ITGBL1O95965 494 aaPredicted RBP17.74■□□□□ 0.43
USE1-210ENST00000601662 EGFRP00533 1210 aa17.74■□□□□ 0.43
USE1-210ENST00000601662 USP17L8P0C7I0 530 aa17.74■□□□□ 0.43
USE1-210ENST00000601662 HIBADHP31937 336 aaKnown RBP17.74■□□□□ 0.43
USE1-210ENST00000601662 VPS37DQ86XT2 251 aa17.74■□□□□ 0.43
USE1-210ENST00000601662 AKAP2Q9Y2D5 859 aa17.74■□□□□ 0.43
USE1-210ENST00000601662 FMR1Q06787 632 aaKnown RBP eCLIP17.73■□□□□ 0.43
USE1-210ENST00000601662 VGLL2Q8N8G2 317 aa17.73■□□□□ 0.43
USE1-210ENST00000601662 FAM84BQ96KN1 310 aaPredicted RBP17.73■□□□□ 0.43
USE1-210ENST00000601662 GMLQ99445 158 aa17.73■□□□□ 0.43
USE1-210ENST00000601662 GPR108Q9NPR9 543 aa17.73■□□□□ 0.43
USE1-210ENST00000601662 IQSEC3Q9UPP2 1182 aaPredicted RBP17.73■□□□□ 0.43
USE1-210ENST00000601662 A0A1B0GUL6 1792 aa17.73■□□□□ 0.43
USE1-210ENST00000601662 IFIT1P09914 478 aaKnown RBP17.72■□□□□ 0.43
USE1-210ENST00000601662 IL1R1P14778 569 aa17.72■□□□□ 0.43
USE1-210ENST00000601662 TFCP2Q12800 502 aa17.72■□□□□ 0.43
USE1-210ENST00000601662 PUM3Q15397 648 aaKnown RBP17.72■□□□□ 0.43
USE1-210ENST00000601662 KIF4BQ2VIQ3 1234 aa17.72■□□□□ 0.43
USE1-210ENST00000601662 CAVIN4Q5BKX8 364 aa17.72■□□□□ 0.43
USE1-210ENST00000601662 KIAA0825Q8IV33 1275 aa17.72■□□□□ 0.43
USE1-210ENST00000601662 TRAF5O00463 557 aa17.71■□□□□ 0.43
USE1-210ENST00000601662 FRAT2O75474 233 aaPredicted RBP17.71■□□□□ 0.43
USE1-210ENST00000601662 SLC5A1P13866 664 aa17.71■□□□□ 0.43
USE1-210ENST00000601662 OGFOD1Q8N543 542 aa17.71■□□□□ 0.43
USE1-210ENST00000601662 GLIS2Q9BZE0 524 aaPredicted RBP17.71■□□□□ 0.43
USE1-210ENST00000601662 PASKQ96RG2 1323 aa17.71■□□□□ 0.42
USE1-210ENST00000601662 F8W031 263 aaPredicted RBP17.7■□□□□ 0.42
USE1-210ENST00000601662 BCAMP50895 628 aa17.7■□□□□ 0.42
USE1-210ENST00000601662 ZNF280AP59817 542 aaPredicted RBP17.7■□□□□ 0.42
USE1-210ENST00000601662 CHAF1AQ13111 956 aaPredicted RBP17.7■□□□□ 0.42
USE1-210ENST00000601662 FBXO33Q7Z6M2 555 aa17.7■□□□□ 0.42
USE1-210ENST00000601662 TDRD7Q8NHU6 1098 aaKnown RBP17.7■□□□□ 0.42
USE1-210ENST00000601662 ZC3H15Q8WU90 426 aaKnown RBP17.7■□□□□ 0.42
USE1-210ENST00000601662 LNPKQ9C0E8 428 aa17.7■□□□□ 0.42
USE1-210ENST00000601662 MYOZ2Q9NPC6 264 aa17.7■□□□□ 0.42
USE1-210ENST00000601662 ADAMTSL1Q8N6G6 1762 aa17.7■□□□□ 0.42
USE1-210ENST00000601662 MYO3BQ8WXR4 1341 aa17.7■□□□□ 0.42
USE1-210ENST00000601662 SMARCA5O60264 1052 aaPredicted RBP17.69■□□□□ 0.42
USE1-210ENST00000601662 IFIT2P09913 472 aaKnown RBP17.69■□□□□ 0.42
USE1-210ENST00000601662 FGFR2P21802 821 aa17.69■□□□□ 0.42
USE1-210ENST00000601662 SCARF1Q14162 830 aa17.69■□□□□ 0.42
USE1-210ENST00000601662 ATP2B3Q16720 1220 aa17.69■□□□□ 0.42
USE1-210ENST00000601662 USP48Q86UV5 1035 aa17.69■□□□□ 0.42
USE1-210ENST00000601662 CERS5Q8N5B7 392 aa17.69■□□□□ 0.42
USE1-210ENST00000601662 LPIN2Q92539 896 aa17.69■□□□□ 0.42
USE1-210ENST00000601662 DCPSQ96C86 337 aaKnown RBP17.69■□□□□ 0.42
USE1-210ENST00000601662 IL1RAPL2Q9NP60 686 aa17.69■□□□□ 0.42
USE1-210ENST00000601662 PGAP2Q9UHJ9 254 aa17.69■□□□□ 0.42
USE1-210ENST00000601662 CEP350Q5VT06 3117 aa17.69■□□□□ 0.42
USE1-210ENST00000601662 ASTN2O75129 1339 aaPredicted RBP17.69■□□□□ 0.42
USE1-210ENST00000601662 TNNI3KQ59H18 835 aa17.68■□□□□ 0.42
USE1-210ENST00000601662 DLK2Q6UY11 383 aa17.68■□□□□ 0.42
USE1-210ENST00000601662 ZNF408Q9H9D4 720 aa17.68■□□□□ 0.42
USE1-210ENST00000601662 HDAC9Q9UKV0 1011 aa17.68■□□□□ 0.42
USE1-210ENST00000601662 FPGT-TNNI3KV9GXZ4 949 aa17.68■□□□□ 0.42
USE1-210ENST00000601662 PSME4Q14997 1843 aa17.68■□□□□ 0.42
USE1-210ENST00000601662 TMEM88BA6NKF7 163 aa17.67■□□□□ 0.42
USE1-210ENST00000601662 CDC37L1Q7L3B6 337 aa17.67■□□□□ 0.42
USE1-210ENST00000601662 AACSQ86V21 672 aa17.67■□□□□ 0.42
USE1-210ENST00000601662 GGA3Q9NZ52 723 aa17.67■□□□□ 0.42
USE1-210ENST00000601662 TIMM10P62072 90 aa17.66■□□□□ 0.42
USE1-210ENST00000601662 NBPF9Q3BBW0 867 aa17.66■□□□□ 0.42
USE1-210ENST00000601662 MFSD14BQ5SR56 506 aa17.66■□□□□ 0.42
USE1-210ENST00000601662 ANGEL2Q5VTE6 544 aaKnown RBP17.66■□□□□ 0.42
USE1-210ENST00000601662 KRT26Q7Z3Y9 468 aa17.66■□□□□ 0.42
USE1-210ENST00000601662 DNAJC5GQ8N7S2 189 aa17.66■□□□□ 0.42
USE1-210ENST00000601662 EAF2Q96CJ1 260 aaPredicted RBP17.66■□□□□ 0.42
USE1-210ENST00000601662 GPATCH3Q96I76 525 aa17.66■□□□□ 0.42
USE1-210ENST00000601662 NEUROD6Q96NK8 337 aa17.66■□□□□ 0.42
USE1-210ENST00000601662 CREBZFQ9NS37 354 aa17.66■□□□□ 0.42
USE1-210ENST00000601662 MKRN1Q9UHC7 482 aaKnown RBP17.66■□□□□ 0.42
USE1-210ENST00000601662 SCAF8Q9UPN6 1271 aaKnown RBP17.66■□□□□ 0.42
USE1-210ENST00000601662 ZNF609O15014 1411 aa17.65■□□□□ 0.42
USE1-210ENST00000601662 ADORA1P30542 326 aa17.65■□□□□ 0.42
USE1-210ENST00000601662 BCL11AQ9H165 835 aa17.65■□□□□ 0.42
USE1-210ENST00000601662 FAM205AQ6ZU69 1335 aa17.65■□□□□ 0.42
USE1-210ENST00000601662 POLR2AP24928 1970 aaKnown RBP17.64■□□□□ 0.41
USE1-210ENST00000601662 A0A1B0GUL7 405 aa17.64■□□□□ 0.41
USE1-210ENST00000601662 ADM5C9JUS6 153 aa17.64■□□□□ 0.41
USE1-210ENST00000601662 CELF2O95319 508 aaKnown RBP17.64■□□□□ 0.41
USE1-210ENST00000601662 RBM5P52756 815 aaKnown RBP eCLIP17.64■□□□□ 0.41
USE1-210ENST00000601662 GORABQ5T7V8 394 aa17.64■□□□□ 0.41
USE1-210ENST00000601662 SULF1Q8IWU6 871 aa17.64■□□□□ 0.41
USE1-210ENST00000601662 ABT1Q9ULW3 272 aaKnown RBP17.64■□□□□ 0.41
USE1-210ENST00000601662 WNT10BO00744 389 aa17.63■□□□□ 0.41
USE1-210ENST00000601662 FKBP1AP62942 108 aaKnown RBP17.63■□□□□ 0.41
USE1-210ENST00000601662 DLGAP5Q15398 846 aa17.63■□□□□ 0.41
USE1-210ENST00000601662 CST9Q5W186 159 aa17.63■□□□□ 0.41
USE1-210ENST00000601662 PLEKHM2Q8IWE5 1019 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms