RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 MYH3P11055 1940 aa10.59□□□□□ -0.71
CCDC9-206ENST00000601154 FKTNO75072 461 aa10.59□□□□□ -0.71
CCDC9-206ENST00000601154 RBM5P52756 815 aaKnown RBP eCLIP10.59□□□□□ -0.71
CCDC9-206ENST00000601154 FOXO4P98177 505 aa10.59□□□□□ -0.71
CCDC9-206ENST00000601154 PKN2Q16513 984 aaKnown RBP10.59□□□□□ -0.71
CCDC9-206ENST00000601154 CFAP100Q494V2 611 aa10.59□□□□□ -0.71
CCDC9-206ENST00000601154 TAF7LQ5H9L4 462 aa10.59□□□□□ -0.71
CCDC9-206ENST00000601154 LDLRAD1Q5T700 205 aa10.59□□□□□ -0.71
CCDC9-206ENST00000601154 LMBR1LQ6UX01 489 aa10.59□□□□□ -0.71
CCDC9-206ENST00000601154 ZNF804AQ7Z570 1209 aa10.59□□□□□ -0.71
CCDC9-206ENST00000601154 SLC10A4Q96EP9 437 aa10.59□□□□□ -0.71
CCDC9-206ENST00000601154 MRS2Q9HD23 443 aa10.59□□□□□ -0.71
CCDC9-206ENST00000601154 COL1A1P02452 1464 aaPredicted RBP10.58□□□□□ -0.72
CCDC9-206ENST00000601154 SPDYE2BA6NHP3 402 aa10.58□□□□□ -0.72
CCDC9-206ENST00000601154 MYO1BO43795 1136 aa10.58□□□□□ -0.72
CCDC9-206ENST00000601154 VAMP4O75379 141 aa10.58□□□□□ -0.72
CCDC9-206ENST00000601154 SPDYE6P0CI01 402 aa10.58□□□□□ -0.72
CCDC9-206ENST00000601154 MMP14P50281 582 aa10.58□□□□□ -0.72
CCDC9-206ENST00000601154 EPHA10Q5JZY3 1008 aa10.58□□□□□ -0.72
CCDC9-206ENST00000601154 BEND3Q5T5X7 828 aa10.58□□□□□ -0.72
CCDC9-206ENST00000601154 FBXO46Q6PJ61 603 aaPredicted RBP10.58□□□□□ -0.72
CCDC9-206ENST00000601154 PRMT6Q96LA8 375 aaPredicted RBP10.58□□□□□ -0.72
CCDC9-206ENST00000601154 CNNM1Q9NRU3 951 aa10.58□□□□□ -0.72
CCDC9-206ENST00000601154 TNRC18O15417 2968 aaPredicted RBP10.57□□□□□ -0.72
CCDC9-206ENST00000601154 MANSC4A6NHS7 340 aaPredicted RBP10.57□□□□□ -0.72
CCDC9-206ENST00000601154 IGF2BP3O00425 579 aaKnown RBP eCLIP10.57□□□□□ -0.72
CCDC9-206ENST00000601154 PPP1R12BO60237 982 aaPredicted RBP10.57□□□□□ -0.72
CCDC9-206ENST00000601154 IL1R1P14778 569 aa10.57□□□□□ -0.72
CCDC9-206ENST00000601154 CCDC57Q2TAC2 916 aa10.57□□□□□ -0.72
CCDC9-206ENST00000601154 NBPF12Q5TAG4 269 aaPredicted RBP10.57□□□□□ -0.72
CCDC9-206ENST00000601154 PRPF38BQ5VTL8 546 aaKnown RBP10.57□□□□□ -0.72
CCDC9-206ENST00000601154 SLC4A10Q6U841 1118 aa10.57□□□□□ -0.72
CCDC9-206ENST00000601154 LDHAL6AQ6ZMR3 332 aa10.57□□□□□ -0.72
CCDC9-206ENST00000601154 C15orf52Q6ZUT6 534 aaKnown RBP10.57□□□□□ -0.72
CCDC9-206ENST00000601154 IFNL1Q8IU54 200 aa10.57□□□□□ -0.72
CCDC9-206ENST00000601154 WNK4Q96J92 1243 aa10.57□□□□□ -0.72
CCDC9-206ENST00000601154 TRIM17Q9Y577 477 aa10.57□□□□□ -0.72
CCDC9-206ENST00000601154 GRM8O00222 908 aa10.56□□□□□ -0.72
CCDC9-206ENST00000601154 ALDH1A1P00352 501 aa10.56□□□□□ -0.72
CCDC9-206ENST00000601154 RASA3Q14644 834 aa10.56□□□□□ -0.72
CCDC9-206ENST00000601154 SUPT20HL1Q3ZLR7 823 aa10.56□□□□□ -0.72
CCDC9-206ENST00000601154 NOM1Q5C9Z4 860 aaKnown RBP10.56□□□□□ -0.72
CCDC9-206ENST00000601154 MTMR14Q8NCE2 650 aa10.56□□□□□ -0.72
CCDC9-206ENST00000601154 SPINK5Q9NQ38 1064 aaPredicted RBP10.56□□□□□ -0.72
CCDC9-206ENST00000601154 PPP2R3BQ9Y5P8 575 aa10.56□□□□□ -0.72
CCDC9-206ENST00000601154 ZBTB48P10074 688 aaPredicted RBP10.55□□□□□ -0.72
CCDC9-206ENST00000601154 GJA5P36382 358 aa10.55□□□□□ -0.72
CCDC9-206ENST00000601154 GYG1P46976 350 aa10.55□□□□□ -0.72
CCDC9-206ENST00000601154 IREB2P48200 963 aaKnown RBP10.55□□□□□ -0.72
CCDC9-206ENST00000601154 MAP3K11Q16584 847 aa10.55□□□□□ -0.72
CCDC9-206ENST00000601154 MFSD14BQ5SR56 506 aa10.55□□□□□ -0.72
CCDC9-206ENST00000601154 WDR63Q8IWG1 891 aa10.55□□□□□ -0.72
CCDC9-206ENST00000601154 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
CCDC9-206ENST00000601154 CFHR5Q9BXR6 569 aa10.55□□□□□ -0.72
CCDC9-206ENST00000601154 PUS3Q9BZE2 481 aaKnown RBP10.55□□□□□ -0.72
CCDC9-206ENST00000601154 ELP3Q9H9T3 547 aa10.55□□□□□ -0.72
CCDC9-206ENST00000601154 C9orf78Q9NZ63 289 aaPredicted RBP10.55□□□□□ -0.72
CCDC9-206ENST00000601154 USP2O75604 605 aaPredicted RBP10.54□□□□□ -0.72
CCDC9-206ENST00000601154 INHBEP58166 350 aa10.54□□□□□ -0.72
CCDC9-206ENST00000601154 FKBP1AP62942 108 aaKnown RBP10.54□□□□□ -0.72
CCDC9-206ENST00000601154 CRHR2Q13324 411 aa10.54□□□□□ -0.72
CCDC9-206ENST00000601154 PDE4DIPQ5VU43 2346 aa10.54□□□□□ -0.72
CCDC9-206ENST00000601154 OTOP1Q7RTM1 612 aa10.54□□□□□ -0.72
CCDC9-206ENST00000601154 CD99L2Q8TCZ2 262 aa10.54□□□□□ -0.72
CCDC9-206ENST00000601154 SUCLG2Q96I99 432 aa10.54□□□□□ -0.72
CCDC9-206ENST00000601154 TDRD3Q9H7E2 651 aaKnown RBP10.54□□□□□ -0.72
CCDC9-206ENST00000601154 TTF2Q9UNY4 1162 aaKnown RBP10.54□□□□□ -0.72
CCDC9-206ENST00000601154 IQSEC3Q9UPP2 1182 aaPredicted RBP10.54□□□□□ -0.72
CCDC9-206ENST00000601154 TCP10L2B9ZVM9 353 aa10.53□□□□□ -0.72
CCDC9-206ENST00000601154 HIBADHP31937 336 aaKnown RBP10.53□□□□□ -0.72
CCDC9-206ENST00000601154 CHAF1AQ13111 956 aaPredicted RBP10.53□□□□□ -0.72
CCDC9-206ENST00000601154 ANKRD13AQ8IZ07 590 aa10.53□□□□□ -0.72
CCDC9-206ENST00000601154 CNKSR2Q8WXI2 1034 aa10.53□□□□□ -0.72
CCDC9-206ENST00000601154 OPTNQ96CV9 577 aa10.53□□□□□ -0.72
CCDC9-206ENST00000601154 SRCIN1Q9C0H9 1055 aa10.53□□□□□ -0.72
CCDC9-206ENST00000601154 ZNF70Q9UC06 446 aaPredicted RBP10.53□□□□□ -0.72
CCDC9-206ENST00000601154 FAM205AQ6ZU69 1335 aa10.53□□□□□ -0.72
CCDC9-206ENST00000601154 A0A1B0GUL6 1792 aa10.52□□□□□ -0.72
CCDC9-206ENST00000601154 POTEFA5A3E0 1075 aa10.52□□□□□ -0.73
CCDC9-206ENST00000601154 ANP32CO43423 234 aa10.52□□□□□ -0.73
CCDC9-206ENST00000601154 TNFAIP1Q13829 316 aa10.52□□□□□ -0.73
CCDC9-206ENST00000601154 GRIK5Q16478 980 aa10.52□□□□□ -0.73
CCDC9-206ENST00000601154 SPDYE2Q495Y8 402 aa10.52□□□□□ -0.73
CCDC9-206ENST00000601154 NCBP3Q53F19 620 aaKnown RBP10.52□□□□□ -0.73
CCDC9-206ENST00000601154 TDRD7Q8NHU6 1098 aaKnown RBP10.52□□□□□ -0.73
CCDC9-206ENST00000601154 ERO1AQ96HE7 468 aa10.52□□□□□ -0.73
CCDC9-206ENST00000601154 FAM84BQ96KN1 310 aaPredicted RBP10.52□□□□□ -0.73
CCDC9-206ENST00000601154 PTPN18Q99952 460 aa10.52□□□□□ -0.73
CCDC9-206ENST00000601154 TMEM39BQ9GZU3 492 aa10.52□□□□□ -0.73
CCDC9-206ENST00000601154 FRAT2O75474 233 aaPredicted RBP10.51□□□□□ -0.73
CCDC9-206ENST00000601154 ALDH1L1O75891 902 aa10.51□□□□□ -0.73
CCDC9-206ENST00000601154 NBPF7P0C2Y1 421 aaPredicted RBP10.51□□□□□ -0.73
CCDC9-206ENST00000601154 CRKP46108 304 aa10.51□□□□□ -0.73
CCDC9-206ENST00000601154 CACNB3P54284 484 aa10.51□□□□□ -0.73
CCDC9-206ENST00000601154 UBE4AQ14139 1066 aa10.51□□□□□ -0.73
CCDC9-206ENST00000601154 OTUD7BQ6GQQ9 843 aa10.51□□□□□ -0.73
CCDC9-206ENST00000601154 VPS37DQ86XT2 251 aa10.51□□□□□ -0.73
CCDC9-206ENST00000601154 DZIP1LQ8IYY4 767 aaKnown RBP10.51□□□□□ -0.73
CCDC9-206ENST00000601154 FAM9BQ8IZU0 186 aa10.51□□□□□ -0.73
CCDC9-206ENST00000601154 KAZALD1Q96I82 304 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms