RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 BEGAINQ9BUH8 593 aa14.37□□□□□ -0.11
CHMP2A-207ENST00000600804 TMX4Q9H1E5 349 aaPredicted RBP14.37□□□□□ -0.11
CHMP2A-207ENST00000600804 KCNQ5Q9NR82 932 aa14.37□□□□□ -0.11
CHMP2A-207ENST00000600804 CNOT7Q9UIV1 285 aaKnown RBP14.37□□□□□ -0.11
CHMP2A-207ENST00000600804 FAM155AB1AL88 458 aaPredicted RBP14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 SASH1O94885 1247 aa14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 PDE8BO95263 885 aa14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 MLLT1Q03111 559 aaPredicted RBP14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 CHRNDQ07001 517 aa14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 SAMD7Q7Z3H4 446 aa14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 USP48Q86UV5 1035 aa14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 MICALL2Q8IY33 904 aa14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 RHPN1Q8TCX5 695 aa14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 CCDC136Q96JN2 1154 aa14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 SIL1Q9H173 461 aa14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 CEP126Q9P2H0 1117 aa14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 EXOC6BQ9Y2D4 811 aa14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 LEMD3Q9Y2U8 911 aa14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 XDHP47989 1333 aa14.36□□□□□ -0.11
CHMP2A-207ENST00000600804 PSMD14O00487 310 aa14.35□□□□□ -0.11
CHMP2A-207ENST00000600804 ZBTB22O15209 634 aa14.35□□□□□ -0.11
CHMP2A-207ENST00000600804 UBE4AQ14139 1066 aa14.35□□□□□ -0.11
CHMP2A-207ENST00000600804 METTL24Q5JXM2 366 aa14.35□□□□□ -0.11
CHMP2A-207ENST00000600804 CDC37L1Q7L3B6 337 aa14.35□□□□□ -0.11
CHMP2A-207ENST00000600804 DBNDD1Q9H9R9 158 aa14.35□□□□□ -0.11
CHMP2A-207ENST00000600804 AKAP2Q9Y2D5 859 aa14.35□□□□□ -0.11
CHMP2A-207ENST00000600804 FGFR2P21802 821 aa14.34□□□□□ -0.11
CHMP2A-207ENST00000600804 OS9Q13438 667 aaPredicted RBP14.34□□□□□ -0.11
CHMP2A-207ENST00000600804 TNIP1Q15025 636 aa14.34□□□□□ -0.11
CHMP2A-207ENST00000600804 C15orf52Q6ZUT6 534 aaKnown RBP14.34□□□□□ -0.11
CHMP2A-207ENST00000600804 LRRCC1Q9C099 1032 aa14.34□□□□□ -0.11
CHMP2A-207ENST00000600804 POLLQ9UGP5 575 aa14.34□□□□□ -0.11
CHMP2A-207ENST00000600804 ASTN2O75129 1339 aaPredicted RBP14.34□□□□□ -0.11
CHMP2A-207ENST00000600804 ADM5C9JUS6 153 aa14.33□□□□□ -0.12
CHMP2A-207ENST00000600804 ATP2B4P23634 1241 aa14.33□□□□□ -0.12
CHMP2A-207ENST00000600804 HUNKP57058 714 aa14.33□□□□□ -0.12
CHMP2A-207ENST00000600804 GPSM2P81274 684 aa14.33□□□□□ -0.12
CHMP2A-207ENST00000600804 TFCP2Q12800 502 aa14.33□□□□□ -0.12
CHMP2A-207ENST00000600804 PUM3Q15397 648 aaKnown RBP14.33□□□□□ -0.12
CHMP2A-207ENST00000600804 TBC1D10BQ4KMP7 808 aaPredicted RBP14.33□□□□□ -0.12
CHMP2A-207ENST00000600804 LPIN2Q92539 896 aa14.33□□□□□ -0.12
CHMP2A-207ENST00000600804 ARAP2Q8WZ64 1704 aa14.32□□□□□ -0.12
CHMP2A-207ENST00000600804 RIMBP2O15034 1052 aa14.32□□□□□ -0.12
CHMP2A-207ENST00000600804 CA12O43570 354 aa14.32□□□□□ -0.12
CHMP2A-207ENST00000600804 NUCB1Q02818 461 aa14.32□□□□□ -0.12
CHMP2A-207ENST00000600804 DGKZQ13574 1117 aa14.32□□□□□ -0.12
CHMP2A-207ENST00000600804 CLASRPQ8N2M8 674 aaKnown RBP14.32□□□□□ -0.12
CHMP2A-207ENST00000600804 DPF2Q92785 391 aa14.32□□□□□ -0.12
CHMP2A-207ENST00000600804 ANKIB1Q9P2G1 1089 aa14.32□□□□□ -0.12
CHMP2A-207ENST00000600804 GGA1Q9UJY5 639 aa14.32□□□□□ -0.12
CHMP2A-207ENST00000600804 ZNF609O15014 1411 aa14.32□□□□□ -0.12
CHMP2A-207ENST00000600804 H7C1D1 291 aa14.31□□□□□ -0.12
CHMP2A-207ENST00000600804 NOGQ13253 232 aa14.31□□□□□ -0.12
CHMP2A-207ENST00000600804 DOK7Q18PE1 504 aa14.31□□□□□ -0.12
CHMP2A-207ENST00000600804 WASHC4Q2M389 1173 aa14.31□□□□□ -0.12
CHMP2A-207ENST00000600804 TNNI3KQ59H18 835 aa14.31□□□□□ -0.12
CHMP2A-207ENST00000600804 B4GALNT3Q6L9W6 998 aa14.31□□□□□ -0.12
CHMP2A-207ENST00000600804 TBC1D16Q8TBP0 767 aa14.31□□□□□ -0.12
CHMP2A-207ENST00000600804 NSFL1CQ9UNZ2 370 aaKnown RBP14.31□□□□□ -0.12
CHMP2A-207ENST00000600804 GTF3C3Q9Y5Q9 886 aa14.31□□□□□ -0.12
CHMP2A-207ENST00000600804 FPGT-TNNI3KV9GXZ4 949 aa14.31□□□□□ -0.12
CHMP2A-207ENST00000600804 ZNF804BA4D1E1 1349 aa14.31□□□□□ -0.12
CHMP2A-207ENST00000600804 IRS2Q9Y4H2 1338 aa14.31□□□□□ -0.12
CHMP2A-207ENST00000600804 LAMB1P07942 1786 aa14.31□□□□□ -0.12
CHMP2A-207ENST00000600804 PAPPA2Q9BXP8 1791 aa14.31□□□□□ -0.12
CHMP2A-207ENST00000600804 HTTP42858 3142 aa14.3□□□□□ -0.12
CHMP2A-207ENST00000600804 ECE2O60344 883 aa14.3□□□□□ -0.12
CHMP2A-207ENST00000600804 TAF5LO75529 589 aa14.3□□□□□ -0.12
CHMP2A-207ENST00000600804 SLC5A1P13866 664 aa14.3□□□□□ -0.12
CHMP2A-207ENST00000600804 ATP2B3Q16720 1220 aa14.3□□□□□ -0.12
CHMP2A-207ENST00000600804 ANKRD45Q5TZF3 282 aa14.3□□□□□ -0.12
CHMP2A-207ENST00000600804 RGMBQ6NW40 437 aa14.3□□□□□ -0.12
CHMP2A-207ENST00000600804 CHD1LQ86WJ1 897 aa14.3□□□□□ -0.12
CHMP2A-207ENST00000600804 HELBQ8NG08 1087 aaPredicted RBP14.3□□□□□ -0.12
CHMP2A-207ENST00000600804 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.3□□□□□ -0.12
CHMP2A-207ENST00000600804 MED23Q9ULK4 1368 aa14.3□□□□□ -0.12
CHMP2A-207ENST00000600804 CENPFP49454 3210 aa14.29□□□□□ -0.12
CHMP2A-207ENST00000600804 A0A1B0GUL7 405 aa14.29□□□□□ -0.12
CHMP2A-207ENST00000600804 IFIT1P09914 478 aaKnown RBP14.29□□□□□ -0.12
CHMP2A-207ENST00000600804 KIF23Q02241 960 aaPredicted RBP14.29□□□□□ -0.12
CHMP2A-207ENST00000600804 RBM26Q5T8P6 1007 aaKnown RBP14.29□□□□□ -0.12
CHMP2A-207ENST00000600804 KRT26Q7Z3Y9 468 aa14.29□□□□□ -0.12
CHMP2A-207ENST00000600804 EAF2Q96CJ1 260 aaPredicted RBP14.29□□□□□ -0.12
CHMP2A-207ENST00000600804 EYA3Q99504 573 aa14.29□□□□□ -0.12
CHMP2A-207ENST00000600804 GBA2Q9HCG7 927 aaPredicted RBP14.29□□□□□ -0.12
CHMP2A-207ENST00000600804 ECM29Q5VYK3 1845 aa14.29□□□□□ -0.12
CHMP2A-207ENST00000600804 UFL1O94874 794 aa14.28□□□□□ -0.12
CHMP2A-207ENST00000600804 KCNJ4P48050 445 aa14.28□□□□□ -0.12
CHMP2A-207ENST00000600804 ZNF512BQ96KM6 892 aaPredicted RBP14.28□□□□□ -0.12
CHMP2A-207ENST00000600804 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
CHMP2A-207ENST00000600804 BRCA2P51587 3418 aa14.27□□□□□ -0.12
CHMP2A-207ENST00000600804 SALL3Q9BXA9 1300 aa14.27□□□□□ -0.12
CHMP2A-207ENST00000600804 C6orf229H3BNL8 230 aa14.27□□□□□ -0.13
CHMP2A-207ENST00000600804 FBXO33Q7Z6M2 555 aa14.27□□□□□ -0.13
CHMP2A-207ENST00000600804 AACSQ86V21 672 aa14.27□□□□□ -0.13
CHMP2A-207ENST00000600804 XAGE2Q96GT9 111 aa14.27□□□□□ -0.13
CHMP2A-207ENST00000600804 IL1RAPL2Q9NP60 686 aa14.27□□□□□ -0.13
CHMP2A-207ENST00000600804 RNF186Q9NXI6 227 aa14.27□□□□□ -0.13
CHMP2A-207ENST00000600804 GGA3Q9NZ52 723 aa14.27□□□□□ -0.13
CHMP2A-207ENST00000600804 MKI67P46013 3256 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms