RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 UBE4AQ14139 1066 aa14.55□□□□□ -0.08
SOX2-OT-233ENST00000600778 LRRC24Q50LG9 513 aa14.55□□□□□ -0.08
SOX2-OT-233ENST00000600778 CERS5Q8N5B7 392 aa14.55□□□□□ -0.08
SOX2-OT-233ENST00000600778 ZIC5Q96T25 663 aa14.55□□□□□ -0.08
SOX2-OT-233ENST00000600778 TSKSQ9UJT2 592 aa14.55□□□□□ -0.08
SOX2-OT-233ENST00000600778 NOB1Q9ULX3 412 aaKnown RBP14.55□□□□□ -0.08
SOX2-OT-233ENST00000600778 HIBADHP31937 336 aaKnown RBP14.54□□□□□ -0.08
SOX2-OT-233ENST00000600778 GYG1P46976 350 aa14.54□□□□□ -0.08
SOX2-OT-233ENST00000600778 BRPF1P55201 1214 aaPredicted RBP14.54□□□□□ -0.08
SOX2-OT-233ENST00000600778 KLHDC4Q8TBB5 520 aa14.54□□□□□ -0.08
SOX2-OT-233ENST00000600778 CCDC102AQ96A19 550 aa14.54□□□□□ -0.08
SOX2-OT-233ENST00000600778 MROH5Q6ZUA9 1318 aa14.54□□□□□ -0.08
SOX2-OT-233ENST00000600778 FAM155AB1AL88 458 aaPredicted RBP14.53□□□□□ -0.08
SOX2-OT-233ENST00000600778 DLGAP5Q15398 846 aa14.53□□□□□ -0.08
SOX2-OT-233ENST00000600778 METTL24Q5JXM2 366 aa14.53□□□□□ -0.08
SOX2-OT-233ENST00000600778 FAM84BQ96KN1 310 aaPredicted RBP14.53□□□□□ -0.08
SOX2-OT-233ENST00000600778 FKBP1AP62942 108 aaKnown RBP14.52□□□□□ -0.09
SOX2-OT-233ENST00000600778 HNRNPUQ00839 825 aaKnown RBP eCLIP14.52□□□□□ -0.09
SOX2-OT-233ENST00000600778 KIF23Q02241 960 aaPredicted RBP14.52□□□□□ -0.09
SOX2-OT-233ENST00000600778 MOB2Q70IA6 237 aa14.52□□□□□ -0.09
SOX2-OT-233ENST00000600778 TDRD7Q8NHU6 1098 aaKnown RBP14.52□□□□□ -0.09
SOX2-OT-233ENST00000600778 ZBED3Q96IU2 234 aaPredicted RBP14.52□□□□□ -0.09
SOX2-OT-233ENST00000600778 PCDHAC2Q9Y5I4 1007 aa14.52□□□□□ -0.09
SOX2-OT-233ENST00000600778 UBE2Q2LH0YL09 131 aa14.51□□□□□ -0.09
SOX2-OT-233ENST00000600778 RARSP54136 660 aaKnown RBP14.51□□□□□ -0.09
SOX2-OT-233ENST00000600778 FKBP1BP68106 108 aa14.51□□□□□ -0.09
SOX2-OT-233ENST00000600778 TTLL12Q14166 644 aaPredicted RBP14.51□□□□□ -0.09
SOX2-OT-233ENST00000600778 CFAP100Q494V2 611 aa14.51□□□□□ -0.09
SOX2-OT-233ENST00000600778 APOBEC3FQ8IUX4 373 aaKnown RBP14.51□□□□□ -0.09
SOX2-OT-233ENST00000600778 API5Q9BZZ5 524 aaKnown RBP14.51□□□□□ -0.09
SOX2-OT-233ENST00000600778 FAM205AQ6ZU69 1335 aa14.5□□□□□ -0.09
SOX2-OT-233ENST00000600778 CA12O43570 354 aa14.5□□□□□ -0.09
SOX2-OT-233ENST00000600778 PDE8BO95263 885 aa14.5□□□□□ -0.09
SOX2-OT-233ENST00000600778 SLC10A3P09131 477 aa14.5□□□□□ -0.09
SOX2-OT-233ENST00000600778 UBTFL1P0CB47 393 aaPredicted RBP14.5□□□□□ -0.09
SOX2-OT-233ENST00000600778 NF2P35240 595 aa14.5□□□□□ -0.09
SOX2-OT-233ENST00000600778 RBM5P52756 815 aaKnown RBP eCLIP14.5□□□□□ -0.09
SOX2-OT-233ENST00000600778 VPS37DQ86XT2 251 aa14.5□□□□□ -0.09
SOX2-OT-233ENST00000600778 MTMR14Q8NCE2 650 aa14.5□□□□□ -0.09
SOX2-OT-233ENST00000600778 IQSEC3Q9UPP2 1182 aaPredicted RBP14.5□□□□□ -0.09
SOX2-OT-233ENST00000600778 CLRN2A0PK11 232 aa14.49□□□□□ -0.09
SOX2-OT-233ENST00000600778 FRAT2O75474 233 aaPredicted RBP14.49□□□□□ -0.09
SOX2-OT-233ENST00000600778 RFX5P48382 616 aaPredicted RBP14.49□□□□□ -0.09
SOX2-OT-233ENST00000600778 PRKG1Q13976 671 aa14.49□□□□□ -0.09
SOX2-OT-233ENST00000600778 CAVIN4Q5BKX8 364 aa14.49□□□□□ -0.09
SOX2-OT-233ENST00000600778 MFSD14BQ5SR56 506 aa14.49□□□□□ -0.09
SOX2-OT-233ENST00000600778 FBXO33Q7Z6M2 555 aa14.49□□□□□ -0.09
SOX2-OT-233ENST00000600778 RASAL3Q86YV0 1011 aa14.49□□□□□ -0.09
SOX2-OT-233ENST00000600778 VGLL2Q8N8G2 317 aa14.49□□□□□ -0.09
SOX2-OT-233ENST00000600778 PRMT6Q96LA8 375 aaPredicted RBP14.49□□□□□ -0.09
SOX2-OT-233ENST00000600778 PAPPA2Q9BXP8 1791 aa14.49□□□□□ -0.09
SOX2-OT-233ENST00000600778 SPDYE2BA6NHP3 402 aa14.48□□□□□ -0.09
SOX2-OT-233ENST00000600778 EYA2O00167 538 aa14.48□□□□□ -0.09
SOX2-OT-233ENST00000600778 MYO1BO43795 1136 aa14.48□□□□□ -0.09
SOX2-OT-233ENST00000600778 SPDYE6P0CI01 402 aa14.48□□□□□ -0.09
SOX2-OT-233ENST00000600778 BCAMP50895 628 aa14.48□□□□□ -0.09
SOX2-OT-233ENST00000600778 PTPN12Q05209 780 aaKnown RBP14.48□□□□□ -0.09
SOX2-OT-233ENST00000600778 CHAF1AQ13111 956 aaPredicted RBP14.48□□□□□ -0.09
SOX2-OT-233ENST00000600778 DEFB129Q9H1M3 183 aa14.48□□□□□ -0.09
SOX2-OT-233ENST00000600778 VEZTQ9HBM0 779 aa14.48□□□□□ -0.09
SOX2-OT-233ENST00000600778 TTF2Q9UNY4 1162 aaKnown RBP14.48□□□□□ -0.09
SOX2-OT-233ENST00000600778 ARMC9Q7Z3E5 817 aa14.47□□□□□ -0.09
SOX2-OT-233ENST00000600778 CSRNP1Q96S65 589 aa14.47□□□□□ -0.09
SOX2-OT-233ENST00000600778 SIL1Q9H173 461 aa14.47□□□□□ -0.09
SOX2-OT-233ENST00000600778 LRRFIP2Q9Y608 721 aaKnown RBP14.47□□□□□ -0.09
SOX2-OT-233ENST00000600778 AOX1Q06278 1338 aa14.46□□□□□ -0.09
SOX2-OT-233ENST00000600778 KIF16BQ96L93 1317 aa14.46□□□□□ -0.09
SOX2-OT-233ENST00000600778 IFIT1P09914 478 aaKnown RBP14.46□□□□□ -0.09
SOX2-OT-233ENST00000600778 FGFR2P21802 821 aa14.46□□□□□ -0.09
SOX2-OT-233ENST00000600778 PUM3Q15397 648 aaKnown RBP14.46□□□□□ -0.09
SOX2-OT-233ENST00000600778 ATG9AQ7Z3C6 839 aa14.46□□□□□ -0.09
SOX2-OT-233ENST00000600778 ARHGAP45Q92619 1136 aa14.46□□□□□ -0.09
SOX2-OT-233ENST00000600778 MEIS3Q99687 375 aa14.46□□□□□ -0.09
SOX2-OT-233ENST00000600778 FZD1Q9UP38 647 aa14.46□□□□□ -0.09
SOX2-OT-233ENST00000600778 TRPA1O75762 1119 aa14.45□□□□□ -0.1
SOX2-OT-233ENST00000600778 BCAR3O75815 825 aa14.45□□□□□ -0.1
SOX2-OT-233ENST00000600778 GRIK5Q16478 980 aa14.45□□□□□ -0.1
SOX2-OT-233ENST00000600778 TDRD3Q9H7E2 651 aaKnown RBP14.45□□□□□ -0.1
SOX2-OT-233ENST00000600778 RNF186Q9NXI6 227 aa14.45□□□□□ -0.1
SOX2-OT-233ENST00000600778 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.45□□□□□ -0.1
SOX2-OT-233ENST00000600778 SERPINA10Q9UK55 444 aa14.45□□□□□ -0.1
SOX2-OT-233ENST00000600778 ANGEL1Q9UNK9 670 aaKnown RBP14.45□□□□□ -0.1
SOX2-OT-233ENST00000600778 HDAC5Q9UQL6 1122 aa14.45□□□□□ -0.1
SOX2-OT-233ENST00000600778 COL1A1P02452 1464 aaPredicted RBP14.44□□□□□ -0.1
SOX2-OT-233ENST00000600778 SLC5A1P13866 664 aa14.44□□□□□ -0.1
SOX2-OT-233ENST00000600778 CRKP46108 304 aa14.44□□□□□ -0.1
SOX2-OT-233ENST00000600778 MKRN3Q13064 507 aaKnown RBP14.44□□□□□ -0.1
SOX2-OT-233ENST00000600778 INTS3Q68E01 1043 aaKnown RBP14.44□□□□□ -0.1
SOX2-OT-233ENST00000600778 REM2Q8IYK8 340 aaPredicted RBP14.44□□□□□ -0.1
SOX2-OT-233ENST00000600778 TBC1D22AQ8WUA7 517 aa14.44□□□□□ -0.1
SOX2-OT-233ENST00000600778 LPIN2Q92539 896 aa14.44□□□□□ -0.1
SOX2-OT-233ENST00000600778 FRAT1Q92837 279 aaPredicted RBP14.44□□□□□ -0.1
SOX2-OT-233ENST00000600778 SAGE1Q9NXZ1 904 aa14.44□□□□□ -0.1
SOX2-OT-233ENST00000600778 PA2G4Q9UQ80 394 aaKnown RBP14.44□□□□□ -0.1
SOX2-OT-233ENST00000600778 PPP2R3BQ9Y5P8 575 aa14.44□□□□□ -0.1
SOX2-OT-233ENST00000600778 ECM29Q5VYK3 1845 aa14.43□□□□□ -0.1
SOX2-OT-233ENST00000600778 IPO8O15397 1037 aaKnown RBP14.43□□□□□ -0.1
SOX2-OT-233ENST00000600778 RASA3Q14644 834 aa14.43□□□□□ -0.1
SOX2-OT-233ENST00000600778 NBPF12Q5TAG4 269 aaPredicted RBP14.43□□□□□ -0.1
SOX2-OT-233ENST00000600778 DZIP1LQ8IYY4 767 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms