RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 OR8K1Q8NGG5 319 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 TTC14Q96N46 770 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 SLC40A1Q9NP59 571 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 EVC2Q86UK5 1308 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 NDUFAB1O14561 156 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 SSBP05455 408 aaKnown RBP eCLIP11.24□□□□□ -0.61
NFKB1-212ENST00000600343 HSPA4P34932 840 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 PPFIA1Q13136 1202 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 RNF187Q5TA31 235 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-212ENST00000600343 MICALCLQ6ZW33 695 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 SPATS2Q86XZ4 545 aaKnown RBP11.24□□□□□ -0.61
NFKB1-212ENST00000600343 PARP9Q8IXQ6 854 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 ANKRD44Q8N8A2 993 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 EZH1Q92800 747 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-212ENST00000600343 VCPKMTQ9H867 229 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 VIPAS39Q9H9C1 493 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 PYGBP11216 843 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 PGBD1Q96JS3 809 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 GOLGA6CA6NDK9 693 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 GOLGA6DP0CG33 693 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 SLC8A1P32418 973 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 TSHZ3Q63HK5 1081 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 RIN2Q8WYP3 895 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-212ENST00000600343 GOLGA6AQ9NYA3 693 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 TBC1D2BQ9UPU7 963 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 PCDHGA4Q9Y5G9 962 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 PDS5BQ9NTI5 1447 aa11.24□□□□□ -0.61
NFKB1-212ENST00000600343 ZNF518AQ6AHZ1 1483 aa11.23□□□□□ -0.61
NFKB1-212ENST00000600343 RNF17Q9BXT8 1623 aaKnown RBP11.23□□□□□ -0.61
NFKB1-212ENST00000600343 IMPDH2P12268 514 aa11.23□□□□□ -0.61
NFKB1-212ENST00000600343 B4GALNT2Q8NHY0 566 aa11.23□□□□□ -0.61
NFKB1-212ENST00000600343 BIN2Q9UBW5 565 aaPredicted RBP11.23□□□□□ -0.61
NFKB1-212ENST00000600343 ADGRB2O60241 1585 aa11.23□□□□□ -0.61
NFKB1-212ENST00000600343 KDM5AP29375 1690 aaKnown RBP11.23□□□□□ -0.61
NFKB1-212ENST00000600343 ZNF202O95125 648 aa11.23□□□□□ -0.61
NFKB1-212ENST00000600343 TUBB4BP68371 445 aa11.23□□□□□ -0.61
NFKB1-212ENST00000600343 SPATA21Q7Z572 469 aa11.23□□□□□ -0.61
NFKB1-212ENST00000600343 MYLK4Q86YV6 388 aaPredicted RBP11.23□□□□□ -0.61
NFKB1-212ENST00000600343 CC2D2BQ6DHV5 1058 aa11.23□□□□□ -0.61
NFKB1-212ENST00000600343 TTLL7Q6ZT98 887 aa11.23□□□□□ -0.61
NFKB1-212ENST00000600343 YIPF3Q9GZM5 350 aa11.23□□□□□ -0.61
NFKB1-212ENST00000600343 OSBPL3Q9H4L5 887 aa11.23□□□□□ -0.61
NFKB1-212ENST00000600343 TUBBP07437 444 aa11.22□□□□□ -0.61
NFKB1-212ENST00000600343 USP4Q13107 963 aa11.22□□□□□ -0.61
NFKB1-212ENST00000600343 PLCB4Q15147 1175 aa11.22□□□□□ -0.61
NFKB1-212ENST00000600343 CCDC13Q8IYE1 715 aa11.22□□□□□ -0.61
NFKB1-212ENST00000600343 BLOC1S6Q9UL45 172 aa11.22□□□□□ -0.61
NFKB1-212ENST00000600343 FANCAO15360 1455 aa11.22□□□□□ -0.61
NFKB1-212ENST00000600343 CD109Q6YHK3 1445 aa11.22□□□□□ -0.61
NFKB1-212ENST00000600343 SLC30A9Q6PML9 568 aa11.22□□□□□ -0.61
NFKB1-212ENST00000600343 RPAP2Q8IXW5 612 aaPredicted RBP11.22□□□□□ -0.61
NFKB1-212ENST00000600343 MAGEC3Q8TD91 643 aa11.22□□□□□ -0.61
NFKB1-212ENST00000600343 MYO5CQ9NQX4 1742 aa11.22□□□□□ -0.61
NFKB1-212ENST00000600343 ARHGAP6O43182 974 aa11.22□□□□□ -0.61
NFKB1-212ENST00000600343 RMI1Q9H9A7 625 aa11.22□□□□□ -0.61
NFKB1-212ENST00000600343 SLC39A2Q9NP94 309 aa11.22□□□□□ -0.61
NFKB1-212ENST00000600343 PDIA5Q14554 519 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 API5Q9BZZ5 524 aaKnown RBP11.21□□□□□ -0.61
NFKB1-212ENST00000600343 PICK1Q9NRD5 415 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 MIS18AQ9NYP9 233 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 SNX14Q9Y5W7 946 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 GRIN2DO15399 1336 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 GOLGA6L7A0A1B0GV03 622 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 ZEB2O60315 1214 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 HMMRO75330 724 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 STIM1Q13586 685 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 SETDB1Q15047 1291 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 PRPF40BQ6NWY9 871 aaKnown RBP11.21□□□□□ -0.61
NFKB1-212ENST00000600343 RINLQ6ZS11 566 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 HOOK2Q96ED9 719 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 FMNL2Q96PY5 1086 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 TSGA10Q9BZW7 698 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 CDC23Q9UJX2 597 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 HPCAL4Q9UM19 191 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 CEP152O94986 1710 aa11.21□□□□□ -0.61
NFKB1-212ENST00000600343 AHCYL1O43865 530 aa11.21□□□□□ -0.62
NFKB1-212ENST00000600343 PDCP20941 246 aa11.21□□□□□ -0.62
NFKB1-212ENST00000600343 KARSQ15046 597 aaKnown RBP11.21□□□□□ -0.62
NFKB1-212ENST00000600343 CYB5D1Q6P9G0 228 aa11.21□□□□□ -0.62
NFKB1-212ENST00000600343 CROCC2H7BZ55 1655 aa11.21□□□□□ -0.62
NFKB1-212ENST00000600343 GGCXP38435 758 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 GOLGA8FQ08AF8 430 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 GOLGA8DPQ0D2H9 430 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 SF3B2Q13435 895 aaKnown RBP11.2□□□□□ -0.62
NFKB1-212ENST00000600343 HSP90AB2PQ58FF8 381 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 FAM228AQ86W67 206 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 RBM12BQ8IXT5 1001 aaKnown RBP11.2□□□□□ -0.62
NFKB1-212ENST00000600343 ZSCAN31Q96LW9 406 aaPredicted RBP11.2□□□□□ -0.62
NFKB1-212ENST00000600343 CCDC114Q96M63 670 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 SH2B1Q9NRF2 756 aaPredicted RBP11.2□□□□□ -0.62
NFKB1-212ENST00000600343 SETD1BQ9UPS6 1966 aaKnown RBP11.2□□□□□ -0.62
NFKB1-212ENST00000600343 CPA1P15085 419 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 CEP85Q6P2H3 762 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 TSHZ1Q6ZSZ6 1077 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 KNDC1Q76NI1 1749 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 PLEKHG4BQ96PX9 1271 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 RTEL1Q9NZ71 1219 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 TPX2Q9ULW0 747 aaKnown RBP11.2□□□□□ -0.62
NFKB1-212ENST00000600343 IQGAP1P46940 1657 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 RAD54L2Q9Y4B4 1467 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms