RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 LACTBP83111 547 aaPredicted RBP17.8■□□□□ 0.44
HOMER3-212ENST00000600077 CCL15Q16663 113 aa17.8■□□□□ 0.44
HOMER3-212ENST00000600077 BRI3BPQ8WY22 251 aa17.8■□□□□ 0.44
HOMER3-212ENST00000600077 COL25A1Q9BXS0 654 aaPredicted RBP17.8■□□□□ 0.44
HOMER3-212ENST00000600077 TLR2O60603 784 aa17.79■□□□□ 0.44
HOMER3-212ENST00000600077 MTFR1Q15390 333 aa17.79■□□□□ 0.44
HOMER3-212ENST00000600077 NBPF12Q5TAG4 269 aaPredicted RBP17.79■□□□□ 0.44
HOMER3-212ENST00000600077 ELP3Q9H9T3 547 aa17.79■□□□□ 0.44
HOMER3-212ENST00000600077 ZCCHC17Q9NP64 241 aaKnown RBP17.79■□□□□ 0.44
HOMER3-212ENST00000600077 BSDC1Q9NW68 430 aaPredicted RBP17.79■□□□□ 0.44
HOMER3-212ENST00000600077 HYPKQ9NX55 129 aa17.79■□□□□ 0.44
HOMER3-212ENST00000600077 MINPP1Q9UNW1 487 aa17.79■□□□□ 0.44
HOMER3-212ENST00000600077 LEMD3Q9Y2U8 911 aa17.79■□□□□ 0.44
HOMER3-212ENST00000600077 PCCAP05165 728 aaPredicted RBP17.78■□□□□ 0.44
HOMER3-212ENST00000600077 CAPN2P17655 700 aa17.78■□□□□ 0.44
HOMER3-212ENST00000600077 HOXD10P28358 340 aa17.78■□□□□ 0.44
HOMER3-212ENST00000600077 HDGFL1Q5TGJ6 251 aa17.78■□□□□ 0.44
HOMER3-212ENST00000600077 DEFB123Q8N688 67 aa17.78■□□□□ 0.44
HOMER3-212ENST00000600077 HELBQ8NG08 1087 aaPredicted RBP17.78■□□□□ 0.44
HOMER3-212ENST00000600077 CCDC85AQ96PX6 553 aaPredicted RBP17.78■□□□□ 0.44
HOMER3-212ENST00000600077 EVI5O60447 810 aa17.77■□□□□ 0.44
HOMER3-212ENST00000600077 HOXB7P09629 217 aa17.77■□□□□ 0.44
HOMER3-212ENST00000600077 GTF2IP78347 998 aa17.77■□□□□ 0.44
HOMER3-212ENST00000600077 LMOD3Q0VAK6 560 aa17.77■□□□□ 0.44
HOMER3-212ENST00000600077 RIC3Q7Z5B4 369 aa17.77■□□□□ 0.44
HOMER3-212ENST00000600077 CCDC191Q8NCU4 936 aa17.77■□□□□ 0.44
HOMER3-212ENST00000600077 ARHGAP39Q9C0H5 1083 aa17.77■□□□□ 0.44
HOMER3-212ENST00000600077 FARP2O94887 1054 aaPredicted RBP17.76■□□□□ 0.43
HOMER3-212ENST00000600077 GRK4P32298 578 aa17.76■□□□□ 0.43
HOMER3-212ENST00000600077 RIPK4P57078 832 aa17.76■□□□□ 0.43
HOMER3-212ENST00000600077 UBXN2AP68543 259 aa17.76■□□□□ 0.43
HOMER3-212ENST00000600077 FAM43AQ8N2R8 423 aa17.76■□□□□ 0.43
HOMER3-212ENST00000600077 TRIM47Q96LD4 638 aa17.76■□□□□ 0.43
HOMER3-212ENST00000600077 RNF208Q9H0X6 261 aa17.76■□□□□ 0.43
HOMER3-212ENST00000600077 VEZTQ9HBM0 779 aa17.76■□□□□ 0.43
HOMER3-212ENST00000600077 CCL5P13501 91 aa17.75■□□□□ 0.43
HOMER3-212ENST00000600077 GOLGA2Q08379 1002 aa17.75■□□□□ 0.43
HOMER3-212ENST00000600077 TNFAIP1Q13829 316 aa17.75■□□□□ 0.43
HOMER3-212ENST00000600077 RASA3Q14644 834 aa17.75■□□□□ 0.43
HOMER3-212ENST00000600077 RAET1EQ8TD07 263 aa17.75■□□□□ 0.43
HOMER3-212ENST00000600077 STAP2Q9UGK3 403 aa17.75■□□□□ 0.43
HOMER3-212ENST00000600077 SRRDQ9UH36 339 aa17.75■□□□□ 0.43
HOMER3-212ENST00000600077 ECM29Q5VYK3 1845 aa17.75■□□□□ 0.43
HOMER3-212ENST00000600077 CLRN2A0PK11 232 aa17.74■□□□□ 0.43
HOMER3-212ENST00000600077 SPDYE2BA6NHP3 402 aa17.74■□□□□ 0.43
HOMER3-212ENST00000600077 SPDYE6P0CI01 402 aa17.74■□□□□ 0.43
HOMER3-212ENST00000600077 BMP8BP34820 402 aa17.74■□□□□ 0.43
HOMER3-212ENST00000600077 CFAP100Q494V2 611 aa17.74■□□□□ 0.43
HOMER3-212ENST00000600077 TXNRD3Q86VQ6 643 aa17.74■□□□□ 0.43
HOMER3-212ENST00000600077 CETPP11597 493 aa17.73■□□□□ 0.43
HOMER3-212ENST00000600077 U2AF1L4Q8WU68 220 aaKnown RBP17.73■□□□□ 0.43
HOMER3-212ENST00000600077 CWC25Q9NXE8 425 aaPredicted RBP17.73■□□□□ 0.43
HOMER3-212ENST00000600077 RIPOR2Q9Y4F9 1068 aa17.73■□□□□ 0.43
HOMER3-212ENST00000600077 CSADQ9Y600 493 aa17.73■□□□□ 0.43
HOMER3-212ENST00000600077 MAP3K9P80192 1104 aa17.72■□□□□ 0.43
HOMER3-212ENST00000600077 DDX10Q13206 875 aaKnown RBP17.72■□□□□ 0.43
HOMER3-212ENST00000600077 KRT24Q2M2I5 525 aa17.72■□□□□ 0.43
HOMER3-212ENST00000600077 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.72■□□□□ 0.43
HOMER3-212ENST00000600077 PRMT6Q96LA8 375 aaPredicted RBP17.72■□□□□ 0.43
HOMER3-212ENST00000600077 ANKRD2Q9GZV1 360 aa17.72■□□□□ 0.43
HOMER3-212ENST00000600077 BIN2Q9UBW5 565 aaPredicted RBP17.72■□□□□ 0.43
HOMER3-212ENST00000600077 CHL1O00533 1208 aa17.71■□□□□ 0.43
HOMER3-212ENST00000600077 PSMC4P43686 418 aa17.71■□□□□ 0.43
HOMER3-212ENST00000600077 CTSWP56202 376 aa17.71■□□□□ 0.43
HOMER3-212ENST00000600077 RALBP1Q15311 655 aa17.71■□□□□ 0.43
HOMER3-212ENST00000600077 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.71■□□□□ 0.43
HOMER3-212ENST00000600077 MYD88Q99836 296 aa17.71■□□□□ 0.43
HOMER3-212ENST00000600077 CD209Q9NNX6 404 aa17.71■□□□□ 0.43
HOMER3-212ENST00000600077 MTMR10Q9NXD2 777 aa17.71■□□□□ 0.43
HOMER3-212ENST00000600077 LAMA3Q16787 3333 aa17.7■□□□□ 0.42
HOMER3-212ENST00000600077 SGPL1O95470 568 aa17.7■□□□□ 0.42
HOMER3-212ENST00000600077 IGHMBP2P38935 993 aaKnown RBP17.7■□□□□ 0.42
HOMER3-212ENST00000600077 FKBP1AP62942 108 aaKnown RBP17.7■□□□□ 0.42
HOMER3-212ENST00000600077 VGLL4Q14135 290 aa17.7■□□□□ 0.42
HOMER3-212ENST00000600077 LRIT3Q3SXY7 679 aa17.7■□□□□ 0.42
HOMER3-212ENST00000600077 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
HOMER3-212ENST00000600077 OTOFQ9HC10 1997 aa17.7■□□□□ 0.42
HOMER3-212ENST00000600077 FMNL1O95466 1100 aaPredicted RBP17.69■□□□□ 0.42
HOMER3-212ENST00000600077 OSBPP22059 807 aa17.69■□□□□ 0.42
HOMER3-212ENST00000600077 RBM5P52756 815 aaKnown RBP eCLIP17.69■□□□□ 0.42
HOMER3-212ENST00000600077 C17orf99Q6UX52 265 aa17.69■□□□□ 0.42
HOMER3-212ENST00000600077 CERS5Q8N5B7 392 aa17.69■□□□□ 0.42
HOMER3-212ENST00000600077 TTLL11Q8NHH1 800 aa17.69■□□□□ 0.42
HOMER3-212ENST00000600077 GDF15Q99988 308 aa17.69■□□□□ 0.42
HOMER3-212ENST00000600077 PCDHAC2Q9Y5I4 1007 aa17.69■□□□□ 0.42
HOMER3-212ENST00000600077 MYPNQ86TC9 1320 aa17.69■□□□□ 0.42
HOMER3-212ENST00000600077 SPDYE5A6NIY4 337 aa17.68■□□□□ 0.42
HOMER3-212ENST00000600077 BTBD19C9JJ37 291 aa17.68■□□□□ 0.42
HOMER3-212ENST00000600077 F8W031 263 aaPredicted RBP17.68■□□□□ 0.42
HOMER3-212ENST00000600077 KCNJ4P48050 445 aa17.68■□□□□ 0.42
HOMER3-212ENST00000600077 SNAPC2Q13487 334 aa17.68■□□□□ 0.42
HOMER3-212ENST00000600077 Q7L0L9 218 aa17.68■□□□□ 0.42
HOMER3-212ENST00000600077 SLAIN1Q8ND83 568 aa17.68■□□□□ 0.42
HOMER3-212ENST00000600077 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.68■□□□□ 0.42
HOMER3-212ENST00000600077 JARID2Q92833 1246 aaPredicted RBP17.68■□□□□ 0.42
HOMER3-212ENST00000600077 ZSWIM8A7E2V4 1837 aa17.68■□□□□ 0.42
HOMER3-212ENST00000600077 ERO1BQ86YB8 467 aa17.67■□□□□ 0.42
HOMER3-212ENST00000600077 GREM2Q9H772 168 aa17.67■□□□□ 0.42
HOMER3-212ENST00000600077 TFRCP02786 760 aaKnown RBP17.66■□□□□ 0.42
HOMER3-212ENST00000600077 KLRK1P26718 216 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms