RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 EAPPQ56P03 285 aaPredicted RBP24.16■■□□□ 1.46
SHKBP1-221ENST00000599833 CHADLQ6NUI6 762 aa24.16■■□□□ 1.46
SHKBP1-221ENST00000599833 CHMP4BQ9H444 224 aaKnown RBP24.16■■□□□ 1.46
SHKBP1-221ENST00000599833 IQSEC3Q9UPP2 1182 aaPredicted RBP24.16■■□□□ 1.46
SHKBP1-221ENST00000599833 MYO3BQ8WXR4 1341 aa24.15■■□□□ 1.46
SHKBP1-221ENST00000599833 PHKA1P46020 1223 aa24.15■■□□□ 1.46
SHKBP1-221ENST00000599833 ITGBL1O95965 494 aaPredicted RBP24.14■■□□□ 1.45
SHKBP1-221ENST00000599833 USP17L8P0C7I0 530 aa24.14■■□□□ 1.45
SHKBP1-221ENST00000599833 GRIK5Q16478 980 aa24.14■■□□□ 1.45
SHKBP1-221ENST00000599833 TBC1D10BQ4KMP7 808 aaPredicted RBP24.14■■□□□ 1.45
SHKBP1-221ENST00000599833 CAVIN4Q5BKX8 364 aa24.14■■□□□ 1.45
SHKBP1-221ENST00000599833 GPR108Q9NPR9 543 aa24.14■■□□□ 1.45
SHKBP1-221ENST00000599833 EXOC6BQ9Y2D4 811 aa24.14■■□□□ 1.45
SHKBP1-221ENST00000599833 PCDHB15Q9Y5E8 787 aa24.14■■□□□ 1.45
SHKBP1-221ENST00000599833 PASKQ96RG2 1323 aa24.13■■□□□ 1.45
SHKBP1-221ENST00000599833 H7C1D1 291 aa24.13■■□□□ 1.45
SHKBP1-221ENST00000599833 FBXW7Q969H0 707 aa24.13■■□□□ 1.45
SHKBP1-221ENST00000599833 XAGE2Q96GT9 111 aa24.13■■□□□ 1.45
SHKBP1-221ENST00000599833 ZBED3Q96IU2 234 aaPredicted RBP24.13■■□□□ 1.45
SHKBP1-221ENST00000599833 AKAP11Q9UKA4 1901 aa24.13■■□□□ 1.45
SHKBP1-221ENST00000599833 TNNI3KQ59H18 835 aa24.12■■□□□ 1.45
SHKBP1-221ENST00000599833 MAP1SQ66K74 1059 aaPredicted RBP24.12■■□□□ 1.45
SHKBP1-221ENST00000599833 CCDC102BQ68D86 513 aa24.12■■□□□ 1.45
SHKBP1-221ENST00000599833 AKAP2Q9Y2D5 859 aa24.12■■□□□ 1.45
SHKBP1-221ENST00000599833 FPGT-TNNI3KV9GXZ4 949 aa24.12■■□□□ 1.45
SHKBP1-221ENST00000599833 ASTN2O75129 1339 aaPredicted RBP24.11■■□□□ 1.45
SHKBP1-221ENST00000599833 KIF4BQ2VIQ3 1234 aa24.11■■□□□ 1.45
SHKBP1-221ENST00000599833 KIAA0825Q8IV33 1275 aa24.11■■□□□ 1.45
SHKBP1-221ENST00000599833 MYOZ2Q9NPC6 264 aa24.11■■□□□ 1.45
SHKBP1-221ENST00000599833 SUPT16HQ9Y5B9 1047 aaKnown RBP24.11■■□□□ 1.45
SHKBP1-221ENST00000599833 PCNTO95613 3336 aa24.1■■□□□ 1.45
SHKBP1-221ENST00000599833 ECM29Q5VYK3 1845 aa24.1■■□□□ 1.45
SHKBP1-221ENST00000599833 VPS37DQ86XT2 251 aa24.1■■□□□ 1.45
SHKBP1-221ENST00000599833 ZC3H15Q8WU90 426 aaKnown RBP24.1■■□□□ 1.45
SHKBP1-221ENST00000599833 MFSD14BQ5SR56 506 aa24.09■■□□□ 1.45
SHKBP1-221ENST00000599833 EAF2Q96CJ1 260 aaPredicted RBP24.09■■□□□ 1.45
SHKBP1-221ENST00000599833 PCDHAC2Q9Y5I4 1007 aa24.09■■□□□ 1.45
SHKBP1-221ENST00000599833 HSPA6P17066 643 aa24.08■■□□□ 1.45
SHKBP1-221ENST00000599833 RASGRF1Q13972 1273 aa24.08■■□□□ 1.45
SHKBP1-221ENST00000599833 CNTROBQ8N137 903 aa24.08■■□□□ 1.45
SHKBP1-221ENST00000599833 TLR7Q9NYK1 1049 aaKnown RBP24.08■■□□□ 1.45
SHKBP1-221ENST00000599833 AOX1Q06278 1338 aa24.08■■□□□ 1.44
SHKBP1-221ENST00000599833 TRPM7Q96QT4 1865 aa24.07■■□□□ 1.44
SHKBP1-221ENST00000599833 HMMRO75330 724 aa24.07■■□□□ 1.44
SHKBP1-221ENST00000599833 MMP14P50281 582 aa24.07■■□□□ 1.44
SHKBP1-221ENST00000599833 FMR1Q06787 632 aaKnown RBP eCLIP24.07■■□□□ 1.44
SHKBP1-221ENST00000599833 CHAF1AQ13111 956 aaPredicted RBP24.07■■□□□ 1.44
SHKBP1-221ENST00000599833 MTMR14Q8NCE2 650 aa24.07■■□□□ 1.44
SHKBP1-221ENST00000599833 RHPN1Q8TCX5 695 aa24.07■■□□□ 1.44
SHKBP1-221ENST00000599833 DBNDD2Q9BQY9 259 aa24.07■■□□□ 1.44
SHKBP1-221ENST00000599833 DBNLQ9UJU6 430 aaKnown RBP24.07■■□□□ 1.44
SHKBP1-221ENST00000599833 CLEC11AQ9Y240 323 aa24.07■■□□□ 1.44
SHKBP1-221ENST00000599833 PDS5AQ29RF7 1337 aaKnown RBP24.07■■□□□ 1.44
SHKBP1-221ENST00000599833 WNT10BO00744 389 aa24.06■■□□□ 1.44
SHKBP1-221ENST00000599833 SEMA3EO15041 775 aa24.06■■□□□ 1.44
SHKBP1-221ENST00000599833 ARID4AP29374 1257 aaPredicted RBP24.06■■□□□ 1.44
SHKBP1-221ENST00000599833 OS9Q13438 667 aaPredicted RBP24.06■■□□□ 1.44
SHKBP1-221ENST00000599833 SCARF1Q14162 830 aa24.06■■□□□ 1.44
SHKBP1-221ENST00000599833 NBPF9Q3BBW0 867 aa24.06■■□□□ 1.44
SHKBP1-221ENST00000599833 RBM26Q5T8P6 1007 aaKnown RBP24.06■■□□□ 1.44
SHKBP1-221ENST00000599833 NEUROD6Q96NK8 337 aa24.05■■□□□ 1.44
SHKBP1-221ENST00000599833 SALL1Q9NSC2 1324 aa24.05■■□□□ 1.44
SHKBP1-221ENST00000599833 F8W031 263 aaPredicted RBP24.04■■□□□ 1.44
SHKBP1-221ENST00000599833 DLK2Q6UY11 383 aa24.04■■□□□ 1.44
SHKBP1-221ENST00000599833 ERC1Q8IUD2 1116 aa24.04■■□□□ 1.44
SHKBP1-221ENST00000599833 TBC1D22AQ8WUA7 517 aa24.04■■□□□ 1.44
SHKBP1-221ENST00000599833 GLIS2Q9BZE0 524 aaPredicted RBP24.04■■□□□ 1.44
SHKBP1-221ENST00000599833 MYO5AQ9Y4I1 1855 aaKnown RBP24.03■■□□□ 1.44
SHKBP1-221ENST00000599833 TRAF5O00463 557 aa24.03■■□□□ 1.44
SHKBP1-221ENST00000599833 HSP90AB4PQ58FF6 505 aa24.03■■□□□ 1.44
SHKBP1-221ENST00000599833 PI16Q6UXB8 463 aa24.03■■□□□ 1.44
SHKBP1-221ENST00000599833 OGFOD1Q8N543 542 aa24.03■■□□□ 1.44
SHKBP1-221ENST00000599833 EXOC6Q8TAG9 804 aa24.03■■□□□ 1.44
SHKBP1-221ENST00000599833 DCTPP1Q9H773 170 aa24.03■■□□□ 1.44
SHKBP1-221ENST00000599833 GGA3Q9NZ52 723 aa24.03■■□□□ 1.44
SHKBP1-221ENST00000599833 HMG20BQ9P0W2 317 aa24.03■■□□□ 1.44
SHKBP1-221ENST00000599833 DENND2AQ9ULE3 1009 aa24.03■■□□□ 1.44
SHKBP1-221ENST00000599833 RAB11FIP3O75154 756 aa24.02■■□□□ 1.44
SHKBP1-221ENST00000599833 MCAMP43121 646 aa24.02■■□□□ 1.44
SHKBP1-221ENST00000599833 WDR66Q8TBY9 1149 aa24.02■■□□□ 1.44
SHKBP1-221ENST00000599833 KIF1BPQ96EK5 621 aa24.02■■□□□ 1.44
SHKBP1-221ENST00000599833 CCDC8Q9H0W5 538 aaPredicted RBP24.02■■□□□ 1.44
SHKBP1-221ENST00000599833 IL1RAPL2Q9NP60 686 aa24.02■■□□□ 1.44
SHKBP1-221ENST00000599833 GNL3LQ9NVN8 582 aaKnown RBP24.02■■□□□ 1.44
SHKBP1-221ENST00000599833 TTF2Q9UNY4 1162 aaKnown RBP24.02■■□□□ 1.44
SHKBP1-221ENST00000599833 SPDYE2BA6NHP3 402 aa24.01■■□□□ 1.43
SHKBP1-221ENST00000599833 FRAT2O75474 233 aaPredicted RBP24.01■■□□□ 1.43
SHKBP1-221ENST00000599833 SPDYE6P0CI01 402 aa24.01■■□□□ 1.43
SHKBP1-221ENST00000599833 PRDX5P30044 214 aa24.01■■□□□ 1.43
SHKBP1-221ENST00000599833 APLP1P51693 650 aa24.01■■□□□ 1.43
SHKBP1-221ENST00000599833 CFAP100Q494V2 611 aa24.01■■□□□ 1.43
SHKBP1-221ENST00000599833 ANGEL2Q5VTE6 544 aaKnown RBP24.01■■□□□ 1.43
SHKBP1-221ENST00000599833 ZNF512BQ96KM6 892 aaPredicted RBP24.01■■□□□ 1.43
SHKBP1-221ENST00000599833 PRMT6Q96LA8 375 aaPredicted RBP24.01■■□□□ 1.43
SHKBP1-221ENST00000599833 HDAC9Q9UKV0 1011 aa24.01■■□□□ 1.43
SHKBP1-221ENST00000599833 SUGT1Q9Y2Z0 365 aa24.01■■□□□ 1.43
SHKBP1-221ENST00000599833 PITPNM2Q9BZ72 1349 aa24.01■■□□□ 1.43
SHKBP1-221ENST00000599833 HTRA3P83110 453 aa24■■□□□ 1.43
SHKBP1-221ENST00000599833 SERPINA10Q9UK55 444 aa24■■□□□ 1.43
SHKBP1-221ENST00000599833 ADM5C9JUS6 153 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms