RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 G3V3G9 751 aa22.45■■□□□ 1.18
LIG1-216ENST00000598938 IFIT1P09914 478 aaKnown RBP22.45■■□□□ 1.18
LIG1-216ENST00000598938 SLC5A1P13866 664 aa22.45■■□□□ 1.18
LIG1-216ENST00000598938 DCAF8Q5TAQ9 597 aa22.45■■□□□ 1.18
LIG1-216ENST00000598938 CYP4F22Q6NT55 531 aa22.45■■□□□ 1.18
LIG1-216ENST00000598938 ERC1Q8IUD2 1116 aa22.45■■□□□ 1.18
LIG1-216ENST00000598938 AKAP2Q9Y2D5 859 aa22.45■■□□□ 1.18
LIG1-216ENST00000598938 ZNF609O15014 1411 aa22.45■■□□□ 1.18
LIG1-216ENST00000598938 ARAP2Q8WZ64 1704 aa22.45■■□□□ 1.18
LIG1-216ENST00000598938 RGS19P49795 217 aa22.44■■□□□ 1.18
LIG1-216ENST00000598938 ZNF804AQ7Z570 1209 aa22.44■■□□□ 1.18
LIG1-216ENST00000598938 PODNQ7Z5L7 613 aa22.44■■□□□ 1.18
LIG1-216ENST00000598938 FAM84BQ96KN1 310 aaPredicted RBP22.44■■□□□ 1.18
LIG1-216ENST00000598938 GPR108Q9NPR9 543 aa22.44■■□□□ 1.18
LIG1-216ENST00000598938 GYG1P46976 350 aa22.43■■□□□ 1.18
LIG1-216ENST00000598938 CXCL9Q07325 125 aa22.43■■□□□ 1.18
LIG1-216ENST00000598938 FBXO33Q7Z6M2 555 aa22.43■■□□□ 1.18
LIG1-216ENST00000598938 CD209Q9NNX6 404 aa22.43■■□□□ 1.18
LIG1-216ENST00000598938 A0A1B0GUL7 405 aa22.42■■□□□ 1.18
LIG1-216ENST00000598938 TRAF5O00463 557 aa22.42■■□□□ 1.18
LIG1-216ENST00000598938 RAB11FIP3O75154 756 aa22.42■■□□□ 1.18
LIG1-216ENST00000598938 FMR1Q06787 632 aaKnown RBP eCLIP22.42■■□□□ 1.18
LIG1-216ENST00000598938 DCTPP1Q9H773 170 aa22.42■■□□□ 1.18
LIG1-216ENST00000598938 PGAP2Q9UHJ9 254 aa22.42■■□□□ 1.18
LIG1-216ENST00000598938 SCN9AQ15858 1988 aa22.41■■□□□ 1.18
LIG1-216ENST00000598938 RAD17O75943 681 aa22.41■■□□□ 1.18
LIG1-216ENST00000598938 IL1R1P14778 569 aa22.41■■□□□ 1.18
LIG1-216ENST00000598938 HIBADHP31937 336 aaKnown RBP22.41■■□□□ 1.18
LIG1-216ENST00000598938 TIMM10P62072 90 aa22.41■■□□□ 1.18
LIG1-216ENST00000598938 HDAC1Q13547 482 aaPredicted RBP22.41■■□□□ 1.18
LIG1-216ENST00000598938 TNNI3KQ59H18 835 aa22.41■■□□□ 1.18
LIG1-216ENST00000598938 CAVIN4Q5BKX8 364 aa22.41■■□□□ 1.18
LIG1-216ENST00000598938 CIAPIN1Q6FI81 312 aa22.41■■□□□ 1.18
LIG1-216ENST00000598938 SAPCD2Q86UD0 394 aa22.41■■□□□ 1.18
LIG1-216ENST00000598938 ZC3H15Q8WU90 426 aaKnown RBP22.41■■□□□ 1.18
LIG1-216ENST00000598938 KIF1BPQ96EK5 621 aa22.41■■□□□ 1.18
LIG1-216ENST00000598938 KCNQ5Q9NR82 932 aa22.41■■□□□ 1.18
LIG1-216ENST00000598938 FPGT-TNNI3KV9GXZ4 949 aa22.41■■□□□ 1.18
LIG1-216ENST00000598938 ADORA1P30542 326 aa22.4■■□□□ 1.18
LIG1-216ENST00000598938 MLLT1Q03111 559 aaPredicted RBP22.4■■□□□ 1.18
LIG1-216ENST00000598938 TNIP1Q15025 636 aa22.4■■□□□ 1.18
LIG1-216ENST00000598938 RHPN1Q8TCX5 695 aa22.4■■□□□ 1.18
LIG1-216ENST00000598938 PSME4Q14997 1843 aa22.4■■□□□ 1.18
LIG1-216ENST00000598938 ZNF646O15015 1829 aaPredicted RBP22.39■■□□□ 1.17
LIG1-216ENST00000598938 BCAMP50895 628 aa22.39■■□□□ 1.17
LIG1-216ENST00000598938 TDRD7Q8NHU6 1098 aaKnown RBP22.39■■□□□ 1.17
LIG1-216ENST00000598938 PSMD14O00487 310 aa22.38■■□□□ 1.17
LIG1-216ENST00000598938 GRM1Q13255 1194 aa22.38■■□□□ 1.17
LIG1-216ENST00000598938 VPS37DQ86XT2 251 aa22.38■■□□□ 1.17
LIG1-216ENST00000598938 XAGE2Q96GT9 111 aa22.38■■□□□ 1.17
LIG1-216ENST00000598938 USP17L3A6NCW0 530 aa22.37■■□□□ 1.17
LIG1-216ENST00000598938 USP17L4A6NCW7 530 aa22.37■■□□□ 1.17
LIG1-216ENST00000598938 CCDC85CA6NKD9 419 aa22.37■■□□□ 1.17
LIG1-216ENST00000598938 APBB1O00213 710 aa22.37■■□□□ 1.17
LIG1-216ENST00000598938 CELF2O95319 508 aaKnown RBP22.37■■□□□ 1.17
LIG1-216ENST00000598938 VIL1P09327 827 aaKnown RBP22.37■■□□□ 1.17
LIG1-216ENST00000598938 USP17L1Q7RTZ2 530 aa22.37■■□□□ 1.17
LIG1-216ENST00000598938 EAF2Q96CJ1 260 aaPredicted RBP22.37■■□□□ 1.17
LIG1-216ENST00000598938 NEUROD6Q96NK8 337 aa22.37■■□□□ 1.17
LIG1-216ENST00000598938 ZBTB22O15209 634 aa22.36■■□□□ 1.17
LIG1-216ENST00000598938 GMPSP49915 693 aaPredicted RBP22.36■■□□□ 1.17
LIG1-216ENST00000598938 STRIP1Q5VSL9 837 aa22.36■■□□□ 1.17
LIG1-216ENST00000598938 IL1RAPL2Q9NP60 686 aa22.36■■□□□ 1.17
LIG1-216ENST00000598938 AOC2O75106 756 aa22.35■■□□□ 1.17
LIG1-216ENST00000598938 PHKA1P46020 1223 aa22.35■■□□□ 1.17
LIG1-216ENST00000598938 DACT2Q5SW24 774 aa22.35■■□□□ 1.17
LIG1-216ENST00000598938 CCDC102BQ68D86 513 aa22.35■■□□□ 1.17
LIG1-216ENST00000598938 LRRCC1Q9C099 1032 aa22.35■■□□□ 1.17
LIG1-216ENST00000598938 RWDD1Q9H446 243 aaPredicted RBP22.35■■□□□ 1.17
LIG1-216ENST00000598938 CASP8AP2Q9UKL3 1982 aa22.35■■□□□ 1.17
LIG1-216ENST00000598938 FAM205AQ6ZU69 1335 aa22.34■■□□□ 1.17
LIG1-216ENST00000598938 GTF2IP78347 998 aa22.34■■□□□ 1.17
LIG1-216ENST00000598938 TTLL5Q6EMB2 1281 aa22.34■■□□□ 1.17
LIG1-216ENST00000598938 RSBN1LQ6PCB5 846 aaPredicted RBP22.34■■□□□ 1.17
LIG1-216ENST00000598938 CDC37L1Q7L3B6 337 aa22.34■■□□□ 1.17
LIG1-216ENST00000598938 DBNDD2Q9BQY9 259 aa22.34■■□□□ 1.17
LIG1-216ENST00000598938 GLIS2Q9BZE0 524 aaPredicted RBP22.34■■□□□ 1.17
LIG1-216ENST00000598938 IGHDP01880 384 aa22.33■■□□□ 1.17
LIG1-216ENST00000598938 RPS12P25398 132 aaKnown RBP22.33■■□□□ 1.17
LIG1-216ENST00000598938 AACSQ86V21 672 aa22.33■■□□□ 1.17
LIG1-216ENST00000598938 CLASRPQ8N2M8 674 aaKnown RBP22.33■■□□□ 1.17
LIG1-216ENST00000598938 GCC1Q96CN9 775 aa22.33■■□□□ 1.17
LIG1-216ENST00000598938 GNL3LQ9NVN8 582 aaKnown RBP22.33■■□□□ 1.17
LIG1-216ENST00000598938 TLR7Q9NYK1 1049 aaKnown RBP22.33■■□□□ 1.17
LIG1-216ENST00000598938 DBNLQ9UJU6 430 aaKnown RBP22.33■■□□□ 1.17
LIG1-216ENST00000598938 IQSEC3Q9UPP2 1182 aaPredicted RBP22.33■■□□□ 1.17
LIG1-216ENST00000598938 ZBTB12Q9Y330 459 aaPredicted RBP22.33■■□□□ 1.17
LIG1-216ENST00000598938 NOGQ13253 232 aa22.32■■□□□ 1.16
LIG1-216ENST00000598938 GORABQ5T7V8 394 aa22.32■■□□□ 1.16
LIG1-216ENST00000598938 DPF2Q92785 391 aa22.32■■□□□ 1.16
LIG1-216ENST00000598938 FBXW7Q969H0 707 aa22.32■■□□□ 1.16
LIG1-216ENST00000598938 GMLQ99445 158 aa22.32■■□□□ 1.16
LIG1-216ENST00000598938 CCDC8Q9H0W5 538 aaPredicted RBP22.32■■□□□ 1.16
LIG1-216ENST00000598938 COL1A1P02452 1464 aaPredicted RBP22.32■■□□□ 1.16
LIG1-216ENST00000598938 SEMA3EO15041 775 aa22.31■■□□□ 1.16
LIG1-216ENST00000598938 FKBP1AP62942 108 aaKnown RBP22.31■■□□□ 1.16
LIG1-216ENST00000598938 AGBL3Q8NEM8 1001 aa22.31■■□□□ 1.16
LIG1-216ENST00000598938 MCOLN1Q9GZU1 580 aa22.31■■□□□ 1.16
LIG1-216ENST00000598938 TSKSQ9UJT2 592 aa22.31■■□□□ 1.16
LIG1-216ENST00000598938 MYO3BQ8WXR4 1341 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms