RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 PUM3Q15397 648 aaKnown RBP18.25■□□□□ 0.51
XRCC1-208ENST00000598422 CDCA5Q96FF9 252 aa18.25■□□□□ 0.51
XRCC1-208ENST00000598422 HHIPL1Q96JK4 782 aa18.25■□□□□ 0.51
XRCC1-208ENST00000598422 IFIT1P09914 478 aaKnown RBP18.24■□□□□ 0.51
XRCC1-208ENST00000598422 RFX5P48382 616 aaPredicted RBP18.24■□□□□ 0.51
XRCC1-208ENST00000598422 MAP2K1Q02750 393 aaPredicted RBP18.24■□□□□ 0.51
XRCC1-208ENST00000598422 DLGAP5Q15398 846 aa18.24■□□□□ 0.51
XRCC1-208ENST00000598422 CERS5Q8N5B7 392 aa18.24■□□□□ 0.51
XRCC1-208ENST00000598422 TDRD7Q8NHU6 1098 aaKnown RBP18.24■□□□□ 0.51
XRCC1-208ENST00000598422 CLUAP1Q96AJ1 413 aa18.24■□□□□ 0.51
XRCC1-208ENST00000598422 FAM84BQ96KN1 310 aaPredicted RBP18.24■□□□□ 0.51
XRCC1-208ENST00000598422 SIL1Q9H173 461 aa18.24■□□□□ 0.51
XRCC1-208ENST00000598422 SLC5A1P13866 664 aa18.23■□□□□ 0.51
XRCC1-208ENST00000598422 PTPN12Q05209 780 aaKnown RBP18.23■□□□□ 0.51
XRCC1-208ENST00000598422 MFSD14BQ5SR56 506 aa18.23■□□□□ 0.51
XRCC1-208ENST00000598422 ZKSCAN2Q63HK3 967 aa18.23■□□□□ 0.51
XRCC1-208ENST00000598422 APOBEC3FQ8IUX4 373 aaKnown RBP18.23■□□□□ 0.51
XRCC1-208ENST00000598422 VGLL2Q8N8G2 317 aa18.23■□□□□ 0.51
XRCC1-208ENST00000598422 BEGAINQ9BUH8 593 aa18.23■□□□□ 0.51
XRCC1-208ENST00000598422 FAM205AQ6ZU69 1335 aa18.23■□□□□ 0.51
XRCC1-208ENST00000598422 PSME4Q14997 1843 aa18.22■□□□□ 0.51
XRCC1-208ENST00000598422 MYO1BO43795 1136 aa18.22■□□□□ 0.51
XRCC1-208ENST00000598422 CHAF1AQ13111 956 aaPredicted RBP18.22■□□□□ 0.51
XRCC1-208ENST00000598422 FBXO3Q9UK99 471 aa18.22■□□□□ 0.51
XRCC1-208ENST00000598422 CIAO1O76071 339 aa18.21■□□□□ 0.51
XRCC1-208ENST00000598422 NF2P35240 595 aa18.21■□□□□ 0.51
XRCC1-208ENST00000598422 CTCFP49711 727 aaPredicted RBP18.21■□□□□ 0.51
XRCC1-208ENST00000598422 RBM5P52756 815 aaKnown RBP eCLIP18.21■□□□□ 0.51
XRCC1-208ENST00000598422 FBXO33Q7Z6M2 555 aa18.21■□□□□ 0.51
XRCC1-208ENST00000598422 FTSJ3Q8IY81 847 aaKnown RBP18.21■□□□□ 0.51
XRCC1-208ENST00000598422 LPIN2Q92539 896 aa18.21■□□□□ 0.51
XRCC1-208ENST00000598422 WBP1LQ9NX94 342 aa18.21■□□□□ 0.51
XRCC1-208ENST00000598422 CEP126Q9P2H0 1117 aa18.21■□□□□ 0.51
XRCC1-208ENST00000598422 SCAF8Q9UPN6 1271 aaKnown RBP18.21■□□□□ 0.51
XRCC1-208ENST00000598422 IQSEC3Q9UPP2 1182 aaPredicted RBP18.21■□□□□ 0.51
XRCC1-208ENST00000598422 FOXN1O15353 648 aa18.2■□□□□ 0.5
XRCC1-208ENST00000598422 AOC2O75106 756 aa18.2■□□□□ 0.5
XRCC1-208ENST00000598422 MAP2K2P36507 400 aa18.2■□□□□ 0.5
XRCC1-208ENST00000598422 CFAP100Q494V2 611 aa18.2■□□□□ 0.5
XRCC1-208ENST00000598422 A0A1B0GUL6 1792 aa18.19■□□□□ 0.5
XRCC1-208ENST00000598422 SRGAP3O43295 1099 aa18.19■□□□□ 0.5
XRCC1-208ENST00000598422 GNAI2P04899 355 aa18.19■□□□□ 0.5
XRCC1-208ENST00000598422 IL15P40933 162 aaPredicted RBP18.19■□□□□ 0.5
XRCC1-208ENST00000598422 BCAMP50895 628 aa18.19■□□□□ 0.5
XRCC1-208ENST00000598422 FKBP1BP68106 108 aa18.19■□□□□ 0.5
XRCC1-208ENST00000598422 NOGQ13253 232 aa18.19■□□□□ 0.5
XRCC1-208ENST00000598422 TTLL12Q14166 644 aaPredicted RBP18.19■□□□□ 0.5
XRCC1-208ENST00000598422 COL13A1Q5TAT6 717 aaPredicted RBP18.19■□□□□ 0.5
XRCC1-208ENST00000598422 RGMBQ6NW40 437 aa18.19■□□□□ 0.5
XRCC1-208ENST00000598422 MTMR14Q8NCE2 650 aa18.19■□□□□ 0.5
XRCC1-208ENST00000598422 TBC1D22AQ8WUA7 517 aa18.19■□□□□ 0.5
XRCC1-208ENST00000598422 ZBED3Q96IU2 234 aaPredicted RBP18.19■□□□□ 0.5
XRCC1-208ENST00000598422 TRPM7Q96QT4 1865 aa18.19■□□□□ 0.5
XRCC1-208ENST00000598422 TTF2Q9UNY4 1162 aaKnown RBP18.19■□□□□ 0.5
XRCC1-208ENST00000598422 PA2G4Q9UQ80 394 aaKnown RBP18.19■□□□□ 0.5
XRCC1-208ENST00000598422 TNNQ9UQP3 1299 aa18.19■□□□□ 0.5
XRCC1-208ENST00000598422 SPDYE2BA6NHP3 402 aa18.18■□□□□ 0.5
XRCC1-208ENST00000598422 SPDYE6P0CI01 402 aa18.18■□□□□ 0.5
XRCC1-208ENST00000598422 FGFR2P21802 821 aa18.18■□□□□ 0.5
XRCC1-208ENST00000598422 ZNF157P51786 506 aaPredicted RBP18.18■□□□□ 0.5
XRCC1-208ENST00000598422 ATP2B3Q16720 1220 aa18.18■□□□□ 0.5
XRCC1-208ENST00000598422 PRAMEF18Q5VWM3 479 aa18.18■□□□□ 0.5
XRCC1-208ENST00000598422 ATG9AQ7Z3C6 839 aa18.18■□□□□ 0.5
XRCC1-208ENST00000598422 TMEM57Q8N5G2 664 aa18.18■□□□□ 0.5
XRCC1-208ENST00000598422 CCDC102AQ96A19 550 aa18.18■□□□□ 0.5
XRCC1-208ENST00000598422 VEZTQ9HBM0 779 aa18.18■□□□□ 0.5
XRCC1-208ENST00000598422 CLRN2A0PK11 232 aa18.17■□□□□ 0.5
XRCC1-208ENST00000598422 COPRSQ9NQ92 184 aa18.17■□□□□ 0.5
XRCC1-208ENST00000598422 MTX1Q13505 466 aa18.16■□□□□ 0.5
XRCC1-208ENST00000598422 DZIP1LQ8IYY4 767 aaKnown RBP18.16■□□□□ 0.5
XRCC1-208ENST00000598422 TNS4Q8IZW8 715 aa18.16■□□□□ 0.5
XRCC1-208ENST00000598422 GNL3LQ9NVN8 582 aaKnown RBP18.16■□□□□ 0.5
XRCC1-208ENST00000598422 SERPINA10Q9UK55 444 aa18.16■□□□□ 0.5
XRCC1-208ENST00000598422 COL1A1P02452 1464 aaPredicted RBP18.15■□□□□ 0.5
XRCC1-208ENST00000598422 IFFO2Q5TF58 517 aa18.15■□□□□ 0.5
XRCC1-208ENST00000598422 ITPRIPQ8IWB1 547 aa18.15■□□□□ 0.5
XRCC1-208ENST00000598422 DEFB129Q9H1M3 183 aa18.15■□□□□ 0.5
XRCC1-208ENST00000598422 PCDHAC2Q9Y5I4 1007 aa18.15■□□□□ 0.5
XRCC1-208ENST00000598422 PPP2R3BQ9Y5P8 575 aa18.15■□□□□ 0.5
XRCC1-208ENST00000598422 THSD7BQ9C0I4 1608 aa18.15■□□□□ 0.5
XRCC1-208ENST00000598422 PCNTO95613 3336 aa18.15■□□□□ 0.5
XRCC1-208ENST00000598422 ZNF646O15015 1829 aaPredicted RBP18.14■□□□□ 0.5
XRCC1-208ENST00000598422 CRKP46108 304 aa18.14■□□□□ 0.49
XRCC1-208ENST00000598422 LBX1P52954 281 aa18.14■□□□□ 0.49
XRCC1-208ENST00000598422 PRMT6Q96LA8 375 aaPredicted RBP18.14■□□□□ 0.49
XRCC1-208ENST00000598422 PRDM10Q9NQV6 1147 aa18.14■□□□□ 0.49
XRCC1-208ENST00000598422 MAST3O60307 1309 aa18.14■□□□□ 0.49
XRCC1-208ENST00000598422 PAPPA2Q9BXP8 1791 aa18.13■□□□□ 0.49
XRCC1-208ENST00000598422 UBE2Q2LH0YL09 131 aa18.13■□□□□ 0.49
XRCC1-208ENST00000598422 CA12O43570 354 aa18.13■□□□□ 0.49
XRCC1-208ENST00000598422 HSPA8P11142 646 aaKnown RBP18.13■□□□□ 0.49
XRCC1-208ENST00000598422 TNFAIP1Q13829 316 aa18.13■□□□□ 0.49
XRCC1-208ENST00000598422 ARMC9Q7Z3E5 817 aa18.13■□□□□ 0.49
XRCC1-208ENST00000598422 WDR66Q8TBY9 1149 aa18.13■□□□□ 0.49
XRCC1-208ENST00000598422 TEKT1Q969V4 418 aa18.13■□□□□ 0.49
XRCC1-208ENST00000598422 FAM155AB1AL88 458 aaPredicted RBP18.12■□□□□ 0.49
XRCC1-208ENST00000598422 SLC10A3P09131 477 aa18.12■□□□□ 0.49
XRCC1-208ENST00000598422 PRKG1Q13976 671 aa18.12■□□□□ 0.49
XRCC1-208ENST00000598422 MOB2Q70IA6 237 aa18.12■□□□□ 0.49
XRCC1-208ENST00000598422 AKAP2Q9Y2D5 859 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms