RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 WNT10BO00744 389 aa17.28■□□□□ 0.36
SCAF1-203ENST00000598359 CT47B1P0C2W7 299 aaPredicted RBP17.28■□□□□ 0.36
SCAF1-203ENST00000598359 IL1R1P14778 569 aa17.28■□□□□ 0.36
SCAF1-203ENST00000598359 ZIC5Q96T25 663 aa17.28■□□□□ 0.36
SCAF1-203ENST00000598359 PCDHAC2Q9Y5I4 1007 aa17.28■□□□□ 0.36
SCAF1-203ENST00000598359 METTL24Q5JXM2 366 aa17.27■□□□□ 0.36
SCAF1-203ENST00000598359 C2orf69Q8N8R5 385 aa17.27■□□□□ 0.36
SCAF1-203ENST00000598359 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
SCAF1-203ENST00000598359 UBE4AQ14139 1066 aa17.26■□□□□ 0.35
SCAF1-203ENST00000598359 HHIPL1Q96JK4 782 aa17.26■□□□□ 0.35
SCAF1-203ENST00000598359 FAM84BQ96KN1 310 aaPredicted RBP17.26■□□□□ 0.35
SCAF1-203ENST00000598359 TSKSQ9UJT2 592 aa17.26■□□□□ 0.35
SCAF1-203ENST00000598359 TNNQ9UQP3 1299 aa17.26■□□□□ 0.35
SCAF1-203ENST00000598359 MROH5Q6ZUA9 1318 aa17.25■□□□□ 0.35
SCAF1-203ENST00000598359 PITPNM2Q9BZ72 1349 aa17.25■□□□□ 0.35
SCAF1-203ENST00000598359 UBTFL1P0CB47 393 aaPredicted RBP17.25■□□□□ 0.35
SCAF1-203ENST00000598359 RFX5P48382 616 aaPredicted RBP17.25■□□□□ 0.35
SCAF1-203ENST00000598359 MOB2Q70IA6 237 aa17.25■□□□□ 0.35
SCAF1-203ENST00000598359 API5Q9BZZ5 524 aaKnown RBP17.25■□□□□ 0.35
SCAF1-203ENST00000598359 HDAC9Q9UKV0 1011 aa17.25■□□□□ 0.35
SCAF1-203ENST00000598359 IQSEC3Q9UPP2 1182 aaPredicted RBP17.25■□□□□ 0.35
SCAF1-203ENST00000598359 BCAR3O75815 825 aa17.24■□□□□ 0.35
SCAF1-203ENST00000598359 HIBADHP31937 336 aaKnown RBP17.24■□□□□ 0.35
SCAF1-203ENST00000598359 MAP2K2P36507 400 aa17.24■□□□□ 0.35
SCAF1-203ENST00000598359 BRPF1P55201 1214 aaPredicted RBP17.24■□□□□ 0.35
SCAF1-203ENST00000598359 RGMBQ6NW40 437 aa17.24■□□□□ 0.35
SCAF1-203ENST00000598359 VGLL2Q8N8G2 317 aa17.24■□□□□ 0.35
SCAF1-203ENST00000598359 ZBED3Q96IU2 234 aaPredicted RBP17.24■□□□□ 0.35
SCAF1-203ENST00000598359 MEIS3Q99687 375 aa17.24■□□□□ 0.35
SCAF1-203ENST00000598359 AOX1Q06278 1338 aa17.23■□□□□ 0.35
SCAF1-203ENST00000598359 ZNF157P51786 506 aaPredicted RBP17.23■□□□□ 0.35
SCAF1-203ENST00000598359 DLGAP5Q15398 846 aa17.23■□□□□ 0.35
SCAF1-203ENST00000598359 TDRD7Q8NHU6 1098 aaKnown RBP17.23■□□□□ 0.35
SCAF1-203ENST00000598359 MCOLN1Q9GZU1 580 aa17.23■□□□□ 0.35
SCAF1-203ENST00000598359 LRRFIP2Q9Y608 721 aaKnown RBP17.23■□□□□ 0.35
SCAF1-203ENST00000598359 FAM155AB1AL88 458 aaPredicted RBP17.22■□□□□ 0.35
SCAF1-203ENST00000598359 PDE8BO95263 885 aa17.22■□□□□ 0.35
SCAF1-203ENST00000598359 PTPN12Q05209 780 aaKnown RBP17.22■□□□□ 0.35
SCAF1-203ENST00000598359 CFAP100Q494V2 611 aa17.22■□□□□ 0.35
SCAF1-203ENST00000598359 FRAT1Q92837 279 aaPredicted RBP17.22■□□□□ 0.35
SCAF1-203ENST00000598359 SIL1Q9H173 461 aa17.22■□□□□ 0.35
SCAF1-203ENST00000598359 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.35
SCAF1-203ENST00000598359 CLRN2A0PK11 232 aa17.21■□□□□ 0.35
SCAF1-203ENST00000598359 UBE2Q2LH0YL09 131 aa17.21■□□□□ 0.35
SCAF1-203ENST00000598359 CHAF1AQ13111 956 aaPredicted RBP17.21■□□□□ 0.35
SCAF1-203ENST00000598359 PRKG1Q13976 671 aa17.21■□□□□ 0.35
SCAF1-203ENST00000598359 GRIK5Q16478 980 aa17.21■□□□□ 0.35
SCAF1-203ENST00000598359 MFSD14BQ5SR56 506 aa17.21■□□□□ 0.35
SCAF1-203ENST00000598359 FBXO33Q7Z6M2 555 aa17.21■□□□□ 0.35
SCAF1-203ENST00000598359 VPS37DQ86XT2 251 aa17.21■□□□□ 0.35
SCAF1-203ENST00000598359 KIF16BQ96L93 1317 aa17.21■□□□□ 0.34
SCAF1-203ENST00000598359 EYA2O00167 538 aa17.2■□□□□ 0.34
SCAF1-203ENST00000598359 BCAMP50895 628 aa17.2■□□□□ 0.34
SCAF1-203ENST00000598359 RBM5P52756 815 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCAF1-203ENST00000598359 FKBP1AP62942 108 aaKnown RBP17.2■□□□□ 0.34
SCAF1-203ENST00000598359 NOGQ13253 232 aa17.2■□□□□ 0.34
SCAF1-203ENST00000598359 ATG9AQ7Z3C6 839 aa17.2■□□□□ 0.34
SCAF1-203ENST00000598359 PRMT6Q96LA8 375 aaPredicted RBP17.2■□□□□ 0.34
SCAF1-203ENST00000598359 FZD1Q9UP38 647 aa17.2■□□□□ 0.34
SCAF1-203ENST00000598359 PA2G4Q9UQ80 394 aaKnown RBP17.2■□□□□ 0.34
SCAF1-203ENST00000598359 SPDYE2BA6NHP3 402 aa17.19■□□□□ 0.34
SCAF1-203ENST00000598359 SPDYE6P0CI01 402 aa17.19■□□□□ 0.34
SCAF1-203ENST00000598359 TRIM27P14373 513 aa17.19■□□□□ 0.34
SCAF1-203ENST00000598359 FGFR2P21802 821 aa17.19■□□□□ 0.34
SCAF1-203ENST00000598359 MMP14P50281 582 aa17.19■□□□□ 0.34
SCAF1-203ENST00000598359 KIF23Q02241 960 aaPredicted RBP17.19■□□□□ 0.34
SCAF1-203ENST00000598359 TTLL12Q14166 644 aaPredicted RBP17.19■□□□□ 0.34
SCAF1-203ENST00000598359 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
SCAF1-203ENST00000598359 APOBEC3FQ8IUX4 373 aaKnown RBP17.19■□□□□ 0.34
SCAF1-203ENST00000598359 MTMR14Q8NCE2 650 aa17.19■□□□□ 0.34
SCAF1-203ENST00000598359 ARHGAP45Q92619 1136 aa17.19■□□□□ 0.34
SCAF1-203ENST00000598359 CLUAP1Q96AJ1 413 aa17.19■□□□□ 0.34
SCAF1-203ENST00000598359 YTHDC1Q96MU7 727 aaKnown RBP17.19■□□□□ 0.34
SCAF1-203ENST00000598359 PAPPA2Q9BXP8 1791 aa17.19■□□□□ 0.34
SCAF1-203ENST00000598359 FRAT2O75474 233 aaPredicted RBP17.18■□□□□ 0.34
SCAF1-203ENST00000598359 SLC10A3P09131 477 aa17.18■□□□□ 0.34
SCAF1-203ENST00000598359 PUM3Q15397 648 aaKnown RBP17.18■□□□□ 0.34
SCAF1-203ENST00000598359 CAVIN4Q5BKX8 364 aa17.18■□□□□ 0.34
SCAF1-203ENST00000598359 RASAL3Q86YV0 1011 aa17.18■□□□□ 0.34
SCAF1-203ENST00000598359 CCDC102AQ96A19 550 aa17.18■□□□□ 0.34
SCAF1-203ENST00000598359 VEZTQ9HBM0 779 aa17.18■□□□□ 0.34
SCAF1-203ENST00000598359 TTF2Q9UNY4 1162 aaKnown RBP17.18■□□□□ 0.34
SCAF1-203ENST00000598359 CA12O43570 354 aa17.17■□□□□ 0.34
SCAF1-203ENST00000598359 DGKZQ13574 1117 aa17.17■□□□□ 0.34
SCAF1-203ENST00000598359 DEFB129Q9H1M3 183 aa17.17■□□□□ 0.34
SCAF1-203ENST00000598359 IFIT1P09914 478 aaKnown RBP17.16■□□□□ 0.34
SCAF1-203ENST00000598359 FKBP1BP68106 108 aa17.16■□□□□ 0.34
SCAF1-203ENST00000598359 ATF7IPQ6VMQ6 1270 aa17.16■□□□□ 0.34
SCAF1-203ENST00000598359 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.16■□□□□ 0.34
SCAF1-203ENST00000598359 IPO8O15397 1037 aaKnown RBP17.15■□□□□ 0.34
SCAF1-203ENST00000598359 SLC5A1P13866 664 aa17.15■□□□□ 0.34
SCAF1-203ENST00000598359 NF2P35240 595 aa17.15■□□□□ 0.34
SCAF1-203ENST00000598359 MKRN3Q13064 507 aaKnown RBP17.15■□□□□ 0.34
SCAF1-203ENST00000598359 LPIN2Q92539 896 aa17.15■□□□□ 0.34
SCAF1-203ENST00000598359 TDRD3Q9H7E2 651 aaKnown RBP17.15■□□□□ 0.34
SCAF1-203ENST00000598359 ARAP2Q8WZ64 1704 aa17.15■□□□□ 0.34
SCAF1-203ENST00000598359 SSC5DA1L4H1 1573 aa17.15■□□□□ 0.34
SCAF1-203ENST00000598359 MYO1BO43795 1136 aa17.14■□□□□ 0.33
SCAF1-203ENST00000598359 GNAI3P08754 354 aa17.14■□□□□ 0.33
SCAF1-203ENST00000598359 CRKP46108 304 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms