RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 FKTNO75072 461 aa12.24□□□□□ -0.45
LINC00343-205ENST00000598229 SCARF1Q14162 830 aa12.24□□□□□ -0.45
LINC00343-205ENST00000598229 PROX2Q3B8N5 592 aa12.24□□□□□ -0.45
LINC00343-205ENST00000598229 LAPTM4BQ86VI4 370 aa12.24□□□□□ -0.45
LINC00343-205ENST00000598229 AGBL3Q8NEM8 1001 aa12.24□□□□□ -0.45
LINC00343-205ENST00000598229 ANKK1Q8NFD2 765 aa12.24□□□□□ -0.45
LINC00343-205ENST00000598229 PITPNM2Q9BZ72 1349 aa12.24□□□□□ -0.45
LINC00343-205ENST00000598229 TRMT112Q9UI30 125 aaKnown RBP12.24□□□□□ -0.45
LINC00343-205ENST00000598229 LAMB4A4D0S4 1761 aa12.23□□□□□ -0.45
LINC00343-205ENST00000598229 DUOX1Q9NRD9 1551 aa12.23□□□□□ -0.45
LINC00343-205ENST00000598229 ZNF609O15014 1411 aa12.23□□□□□ -0.45
LINC00343-205ENST00000598229 ASTN2O75129 1339 aaPredicted RBP12.23□□□□□ -0.45
LINC00343-205ENST00000598229 TCIRG1Q13488 830 aa12.23□□□□□ -0.45
LINC00343-205ENST00000598229 SF3B3Q15393 1217 aaKnown RBP12.23□□□□□ -0.45
LINC00343-205ENST00000598229 ANGEL2Q5VTE6 544 aaKnown RBP12.23□□□□□ -0.45
LINC00343-205ENST00000598229 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.23□□□□□ -0.45
LINC00343-205ENST00000598229 UBE2Q2LH0YL09 131 aa12.22□□□□□ -0.45
LINC00343-205ENST00000598229 GPSM2P81274 684 aa12.22□□□□□ -0.45
LINC00343-205ENST00000598229 SREBF2Q12772 1141 aa12.22□□□□□ -0.45
LINC00343-205ENST00000598229 C6orf132Q5T0Z8 1188 aa12.22□□□□□ -0.45
LINC00343-205ENST00000598229 SPRYD3Q8NCJ5 442 aa12.22□□□□□ -0.45
LINC00343-205ENST00000598229 ZC3H12CQ9C0D7 883 aaKnown RBP12.22□□□□□ -0.45
LINC00343-205ENST00000598229 POLR2AP24928 1970 aaKnown RBP12.21□□□□□ -0.45
LINC00343-205ENST00000598229 ANKRD36CQ5JPF3 1778 aa12.21□□□□□ -0.45
LINC00343-205ENST00000598229 ALDH1A1P00352 501 aa12.21□□□□□ -0.45
LINC00343-205ENST00000598229 TBC1D16Q8TBP0 767 aa12.21□□□□□ -0.45
LINC00343-205ENST00000598229 GMLQ99445 158 aa12.21□□□□□ -0.45
LINC00343-205ENST00000598229 THUMPD2Q9BTF0 503 aaKnown RBP12.21□□□□□ -0.45
LINC00343-205ENST00000598229 PODXL2Q9NZ53 605 aa12.21□□□□□ -0.45
LINC00343-205ENST00000598229 PAPPA2Q9BXP8 1791 aa12.2□□□□□ -0.46
LINC00343-205ENST00000598229 RGS20O76081 388 aa12.2□□□□□ -0.46
LINC00343-205ENST00000598229 NEFMP07197 916 aa12.2□□□□□ -0.46
LINC00343-205ENST00000598229 INHBEP58166 350 aa12.2□□□□□ -0.46
LINC00343-205ENST00000598229 RSBN1LQ6PCB5 846 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-205ENST00000598229 COPS6Q7L5N1 327 aa12.2□□□□□ -0.46
LINC00343-205ENST00000598229 CELF1Q92879 486 aaKnown RBP12.2□□□□□ -0.46
LINC00343-205ENST00000598229 USP17L8P0C7I0 530 aa12.19□□□□□ -0.46
LINC00343-205ENST00000598229 RPS8P62241 208 aaKnown RBP12.19□□□□□ -0.46
LINC00343-205ENST00000598229 TRIM26Q12899 539 aaPredicted RBP12.19□□□□□ -0.46
LINC00343-205ENST00000598229 MOB2Q70IA6 237 aa12.19□□□□□ -0.46
LINC00343-205ENST00000598229 R3HDMLQ9H3Y0 253 aa12.19□□□□□ -0.46
LINC00343-205ENST00000598229 MYOZ2Q9NPC6 264 aa12.19□□□□□ -0.46
LINC00343-205ENST00000598229 BABAM1Q9NWV8 329 aa12.19□□□□□ -0.46
LINC00343-205ENST00000598229 LRRC37AA6NMS7 1700 aa12.19□□□□□ -0.46
LINC00343-205ENST00000598229 NF2P35240 595 aa12.18□□□□□ -0.46
LINC00343-205ENST00000598229 CNGB1Q14028 1251 aaPredicted RBP12.18□□□□□ -0.46
LINC00343-205ENST00000598229 PROSER3Q2NL68 480 aa12.18□□□□□ -0.46
LINC00343-205ENST00000598229 OTOP1Q7RTM1 612 aa12.18□□□□□ -0.46
LINC00343-205ENST00000598229 KIAA1468Q9P260 1216 aa12.18□□□□□ -0.46
LINC00343-205ENST00000598229 EIF2S2P20042 333 aaKnown RBP12.17□□□□□ -0.46
LINC00343-205ENST00000598229 PPP2R1AP30153 589 aa12.17□□□□□ -0.46
LINC00343-205ENST00000598229 MMP14P50281 582 aa12.17□□□□□ -0.46
LINC00343-205ENST00000598229 NFE2L2Q16236 605 aa12.17□□□□□ -0.46
LINC00343-205ENST00000598229 LDLRAD1Q5T700 205 aa12.17□□□□□ -0.46
LINC00343-205ENST00000598229 XAGE3Q8WTP9 111 aa12.17□□□□□ -0.46
LINC00343-205ENST00000598229 ARMC5Q96C12 935 aa12.17□□□□□ -0.46
LINC00343-205ENST00000598229 TRIM17Q9Y577 477 aa12.17□□□□□ -0.46
LINC00343-205ENST00000598229 KDM3BQ7LBC6 1761 aa12.17□□□□□ -0.46
LINC00343-205ENST00000598229 MKI67P46013 3256 aaKnown RBP12.17□□□□□ -0.46
LINC00343-205ENST00000598229 SPDYE16A6NNV3 312 aaPredicted RBP12.16□□□□□ -0.46
LINC00343-205ENST00000598229 PTPN12Q05209 780 aaKnown RBP12.16□□□□□ -0.46
LINC00343-205ENST00000598229 AIMP1Q12904 312 aaKnown RBP12.16□□□□□ -0.46
LINC00343-205ENST00000598229 TRIM28Q13263 835 aaKnown RBP12.16□□□□□ -0.46
LINC00343-205ENST00000598229 TTLL12Q14166 644 aaPredicted RBP12.16□□□□□ -0.46
LINC00343-205ENST00000598229 SPRYD7Q5W111 196 aa12.16□□□□□ -0.46
LINC00343-205ENST00000598229 ARMC9Q7Z3E5 817 aa12.16□□□□□ -0.46
LINC00343-205ENST00000598229 PODNQ7Z5L7 613 aa12.16□□□□□ -0.46
LINC00343-205ENST00000598229 DDX12PQ92771 950 aa12.16□□□□□ -0.46
LINC00343-205ENST00000598229 PLEKHF1Q96S99 279 aa12.16□□□□□ -0.46
LINC00343-205ENST00000598229 TSPYL4Q9UJ04 414 aa12.16□□□□□ -0.46
LINC00343-205ENST00000598229 PTPN22Q9Y2R2 807 aa12.16□□□□□ -0.46
LINC00343-205ENST00000598229 LAMB2P55268 1798 aa12.15□□□□□ -0.46
LINC00343-205ENST00000598229 USP17L3A6NCW0 530 aa12.15□□□□□ -0.46
LINC00343-205ENST00000598229 USP17L4A6NCW7 530 aa12.15□□□□□ -0.46
LINC00343-205ENST00000598229 SOWAHBA6NEL2 793 aa12.15□□□□□ -0.46
LINC00343-205ENST00000598229 MANSC4A6NHS7 340 aaPredicted RBP12.15□□□□□ -0.46
LINC00343-205ENST00000598229 TRIM6-TRIM34B2RNG4 842 aa12.15□□□□□ -0.46
LINC00343-205ENST00000598229 UFL1O94874 794 aa12.15□□□□□ -0.46
LINC00343-205ENST00000598229 ANXA1P04083 346 aa12.15□□□□□ -0.46
LINC00343-205ENST00000598229 PRAMEF18Q5VWM3 479 aa12.15□□□□□ -0.46
LINC00343-205ENST00000598229 NYAP1Q6ZVC0 841 aa12.15□□□□□ -0.46
LINC00343-205ENST00000598229 USP17L1Q7RTZ2 530 aa12.15□□□□□ -0.46
LINC00343-205ENST00000598229 FAM89AQ96GI7 184 aa12.15□□□□□ -0.46
LINC00343-205ENST00000598229 ZFRQ96KR1 1074 aaKnown RBP12.15□□□□□ -0.46
LINC00343-205ENST00000598229 ISCA1Q9BUE6 129 aa12.15□□□□□ -0.46
LINC00343-205ENST00000598229 ANKIB1Q9P2G1 1089 aa12.15□□□□□ -0.46
LINC00343-205ENST00000598229 GGA1Q9UJY5 639 aa12.15□□□□□ -0.46
LINC00343-205ENST00000598229 HTTP42858 3142 aa12.14□□□□□ -0.47
LINC00343-205ENST00000598229 UNCXA6NJT0 531 aa12.14□□□□□ -0.47
LINC00343-205ENST00000598229 HSP90B1P14625 803 aaKnown RBP12.14□□□□□ -0.47
LINC00343-205ENST00000598229 EN2P19622 333 aaPredicted RBP12.14□□□□□ -0.47
LINC00343-205ENST00000598229 NBPF9Q3BBW0 867 aa12.14□□□□□ -0.47
LINC00343-205ENST00000598229 PLBD2Q8NHP8 589 aa12.14□□□□□ -0.47
LINC00343-205ENST00000598229 ERO1AQ96HE7 468 aa12.14□□□□□ -0.47
LINC00343-205ENST00000598229 PNNQ9H307 717 aaKnown RBP12.14□□□□□ -0.47
LINC00343-205ENST00000598229 OGFOD1Q8N543 542 aa12.13□□□□□ -0.47
LINC00343-205ENST00000598229 DDX60Q8IY21 1712 aaKnown RBP12.13□□□□□ -0.47
LINC00343-205ENST00000598229 WNT10BO00744 389 aa12.12□□□□□ -0.47
LINC00343-205ENST00000598229 IRS4O14654 1257 aaPredicted RBP12.12□□□□□ -0.47
LINC00343-205ENST00000598229 ZBTB48P10074 688 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms