RNA–Protein interactions for RNA: ENST00000597389.5

SPTBN4-211, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 5

Gene SPTBN4, Length 5,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-211ENST00000597389 RAB3IL1Q8TBN0 382 aa22.6■■□□□ 1.21
SPTBN4-211ENST00000597389 UFL1O94874 794 aa22.6■■□□□ 1.21
SPTBN4-211ENST00000597389 PARP1P09874 1014 aaKnown RBP22.6■■□□□ 1.21
SPTBN4-211ENST00000597389 STX17P56962 302 aa22.6■■□□□ 1.21
SPTBN4-211ENST00000597389 C6orf163Q5TEZ5 329 aa22.6■■□□□ 1.21
SPTBN4-211ENST00000597389 GTF2F1P35269 517 aaKnown RBP eCLIP22.6■■□□□ 1.21
SPTBN4-211ENST00000597389 MXRA7P84157 204 aa22.6■■□□□ 1.21
SPTBN4-211ENST00000597389 GPCPD1Q9NPB8 672 aa22.6■■□□□ 1.21
SPTBN4-211ENST00000597389 RALGAPBQ86X10 1494 aa22.6■■□□□ 1.21
SPTBN4-211ENST00000597389 LMTK3Q96Q04 1460 aa22.6■■□□□ 1.21
SPTBN4-211ENST00000597389 HS2ST1Q7LGA3 356 aa22.59■■□□□ 1.21
SPTBN4-211ENST00000597389 CNBD1Q8NA66 436 aa22.59■■□□□ 1.21
SPTBN4-211ENST00000597389 ZNF830Q96NB3 372 aaPredicted RBP22.59■■□□□ 1.21
SPTBN4-211ENST00000597389 DNM1Q05193 864 aaKnown RBP22.59■■□□□ 1.21
SPTBN4-211ENST00000597389 SPAG1Q07617 926 aa22.59■■□□□ 1.21
SPTBN4-211ENST00000597389 PCDH11XQ9BZA7 1347 aa22.59■■□□□ 1.21
SPTBN4-211ENST00000597389 PCDH11YQ9BZA8 1340 aa22.59■■□□□ 1.21
SPTBN4-211ENST00000597389 APBB1IPQ7Z5R6 666 aaPredicted RBP22.59■■□□□ 1.21
SPTBN4-211ENST00000597389 DNAJC25Q9H1X3 360 aa22.59■■□□□ 1.21
SPTBN4-211ENST00000597389 ZHX1Q9UKY1 873 aaPredicted RBP22.59■■□□□ 1.21
SPTBN4-211ENST00000597389 SPTLC2O15270 562 aa22.58■■□□□ 1.21
SPTBN4-211ENST00000597389 PRPHP41219 470 aa22.58■■□□□ 1.21
SPTBN4-211ENST00000597389 EIF6P56537 245 aaKnown RBP22.58■■□□□ 1.21
SPTBN4-211ENST00000597389 HDAC1Q13547 482 aaPredicted RBP22.58■■□□□ 1.21
SPTBN4-211ENST00000597389 TBC1D32Q96NH3 1257 aa22.58■■□□□ 1.21
SPTBN4-211ENST00000597389 BICC1Q9H694 974 aaKnown RBP22.58■■□□□ 1.21
SPTBN4-211ENST00000597389 PICK1Q9NRD5 415 aa22.58■■□□□ 1.21
SPTBN4-211ENST00000597389 LINS1Q8NG48 757 aa22.58■■□□□ 1.21
SPTBN4-211ENST00000597389 DACT1Q9NYF0 836 aa22.58■■□□□ 1.21
SPTBN4-211ENST00000597389 GNA11P29992 359 aa22.58■■□□□ 1.2
SPTBN4-211ENST00000597389 TEX11Q8IYF3 940 aa22.58■■□□□ 1.2
SPTBN4-211ENST00000597389 STK32BQ9NY57 414 aa22.58■■□□□ 1.2
SPTBN4-211ENST00000597389 MAP3K5Q99683 1374 aa22.58■■□□□ 1.2
SPTBN4-211ENST00000597389 CHMP2AO43633 222 aa22.57■■□□□ 1.2
SPTBN4-211ENST00000597389 UBXN1Q04323 297 aa22.57■■□□□ 1.2
SPTBN4-211ENST00000597389 UVSSAQ2YD98 709 aa22.57■■□□□ 1.2
SPTBN4-211ENST00000597389 DDX23Q9BUQ8 820 aaKnown RBP22.57■■□□□ 1.2
SPTBN4-211ENST00000597389 CAVIN2O95810 425 aa22.57■■□□□ 1.2
SPTBN4-211ENST00000597389 DCAF17Q5H9S7 520 aaPredicted RBP22.57■■□□□ 1.2
SPTBN4-211ENST00000597389 DCAF5Q96JK2 942 aa22.57■■□□□ 1.2
SPTBN4-211ENST00000597389 ZFP91Q96JP5 570 aaPredicted RBP22.57■■□□□ 1.2
SPTBN4-211ENST00000597389 NOD1Q9Y239 953 aa22.57■■□□□ 1.2
SPTBN4-211ENST00000597389 NEK11Q8NG66 645 aa22.57■■□□□ 1.2
SPTBN4-211ENST00000597389 CCNL1Q9UK58 526 aaPredicted RBP22.57■■□□□ 1.2
SPTBN4-211ENST00000597389 TACC1O75410 805 aa22.57■■□□□ 1.2
SPTBN4-211ENST00000597389 MBD4O95243 580 aa22.57■■□□□ 1.2
SPTBN4-211ENST00000597389 CEP83Q9Y592 693 aa22.57■■□□□ 1.2
SPTBN4-211ENST00000597389 ZYXQ15942 572 aaKnown RBP22.56■■□□□ 1.2
SPTBN4-211ENST00000597389 TMOD4Q9NZQ9 345 aa22.56■■□□□ 1.2
SPTBN4-211ENST00000597389 DTHD1Q6ZMT9 781 aa22.56■■□□□ 1.2
SPTBN4-211ENST00000597389 CTAGE15A4D2H0 777 aa22.56■■□□□ 1.2
SPTBN4-211ENST00000597389 F13A1P00488 732 aa22.56■■□□□ 1.2
SPTBN4-211ENST00000597389 CTAGE8P0CG41 777 aa22.56■■□□□ 1.2
SPTBN4-211ENST00000597389 KRT24Q2M2I5 525 aa22.56■■□□□ 1.2
SPTBN4-211ENST00000597389 CTAGE6Q86UF2 777 aa22.56■■□□□ 1.2
SPTBN4-211ENST00000597389 CTAGE4Q8IX94 777 aa22.56■■□□□ 1.2
SPTBN4-211ENST00000597389 LAMC3Q9Y6N6 1575 aa22.56■■□□□ 1.2
SPTBN4-211ENST00000597389 FLT4P35916 1363 aa22.55■■□□□ 1.2
SPTBN4-211ENST00000597389 PROCA1Q8NCQ7 364 aaPredicted RBP22.55■■□□□ 1.2
SPTBN4-211ENST00000597389 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.55■■□□□ 1.2
SPTBN4-211ENST00000597389 TTC6Q86TZ1 520 aa22.55■■□□□ 1.2
SPTBN4-211ENST00000597389 BICDL2A1A5D9 508 aa22.55■■□□□ 1.2
SPTBN4-211ENST00000597389 MSANTD4Q8NCY6 345 aa22.55■■□□□ 1.2
SPTBN4-211ENST00000597389 C19orf44Q9H6X5 657 aa22.55■■□□□ 1.2
SPTBN4-211ENST00000597389 DNAI1Q9UI46 699 aa22.55■■□□□ 1.2
SPTBN4-211ENST00000597389 PRKG1Q13976 671 aa22.55■■□□□ 1.2
SPTBN4-211ENST00000597389 FBF1Q8TES7 1133 aa22.55■■□□□ 1.2
SPTBN4-211ENST00000597389 CREB3L3Q68CJ9 461 aa22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 LMBR1Q8WVP7 490 aa22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 CAPZA3Q96KX2 299 aa22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 SKILP12757 684 aa22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 RAPGEF1Q13905 1077 aa22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 CCDC117Q8IWD4 279 aaPredicted RBP22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 SH2D4AQ9H788 454 aa22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 DENND2AQ9ULE3 1009 aa22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 GCP02774 474 aa22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 SYT1P21579 422 aa22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 FCHSD1Q86WN1 690 aa22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 RNMTO43148 476 aaKnown RBP22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 KRT5P13647 590 aa22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 LETM2Q2VYF4 491 aa22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 KIF4AO95239 1232 aa22.54■■□□□ 1.2
SPTBN4-211ENST00000597389 PTPDC1A2A3K4 754 aa22.53■■□□□ 1.2
SPTBN4-211ENST00000597389 KLHL40Q2TBA0 621 aa22.53■■□□□ 1.2
SPTBN4-211ENST00000597389 FAM89AQ96GI7 184 aa22.53■■□□□ 1.2
SPTBN4-211ENST00000597389 TTC41PQ6P2S7 1318 aa22.53■■□□□ 1.2
SPTBN4-211ENST00000597389 ATP2A1O14983 1001 aa22.53■■□□□ 1.2
SPTBN4-211ENST00000597389 CCDC77Q9BR77 488 aa22.53■■□□□ 1.2
SPTBN4-211ENST00000597389 PCDHB15Q9Y5E8 787 aa22.53■■□□□ 1.2
SPTBN4-211ENST00000597389 CCDC171Q6TFL3 1326 aa22.53■■□□□ 1.2
SPTBN4-211ENST00000597389 RBM28Q9NW13 759 aaKnown RBP22.53■■□□□ 1.2
SPTBN4-211ENST00000597389 POLKQ9UBT6 870 aa22.53■■□□□ 1.2
SPTBN4-211ENST00000597389 SMIM23A6NLE4 172 aa22.52■■□□□ 1.2
SPTBN4-211ENST00000597389 ASXL1Q8IXJ9 1541 aa22.52■■□□□ 1.2
SPTBN4-211ENST00000597389 BIRC3Q13489 604 aa22.52■■□□□ 1.2
SPTBN4-211ENST00000597389 ZNF174Q15697 407 aa22.52■■□□□ 1.2
SPTBN4-211ENST00000597389 ATP6V0A2Q9Y487 856 aa22.52■■□□□ 1.2
SPTBN4-211ENST00000597389 CCDC42Q96M95 316 aa22.52■■□□□ 1.2
SPTBN4-211ENST00000597389 AK2P54819 239 aa22.52■■□□□ 1.2
SPTBN4-211ENST00000597389 URB2Q14146 1524 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms