RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 SCARF1Q14162 830 aa26.21■■□□□ 1.79
PNKP-209ENST00000596726 ASTN2O75129 1339 aaPredicted RBP26.2■■□□□ 1.79
PNKP-209ENST00000596726 BCAMP50895 628 aa26.2■■□□□ 1.78
PNKP-209ENST00000596726 ATP8B2P98198 1209 aa26.2■■□□□ 1.78
PNKP-209ENST00000596726 POLA2Q14181 598 aa26.2■■□□□ 1.78
PNKP-209ENST00000596726 CST9Q5W186 159 aa26.2■■□□□ 1.78
PNKP-209ENST00000596726 VPS37DQ86XT2 251 aa26.2■■□□□ 1.78
PNKP-209ENST00000596726 ARAP2Q8WZ64 1704 aa26.19■■□□□ 1.78
PNKP-209ENST00000596726 USP48Q86UV5 1035 aa26.19■■□□□ 1.78
PNKP-209ENST00000596726 DCPSQ96C86 337 aaKnown RBP26.19■■□□□ 1.78
PNKP-209ENST00000596726 C1orf115Q9H7X2 142 aa26.19■■□□□ 1.78
PNKP-209ENST00000596726 HDAC9Q9UKV0 1011 aa26.19■■□□□ 1.78
PNKP-209ENST00000596726 JAG2Q9Y219 1238 aa26.19■■□□□ 1.78
PNKP-209ENST00000596726 ATP2B3Q16720 1220 aa26.18■■□□□ 1.78
PNKP-209ENST00000596726 SSH3Q8TE77 659 aa26.18■■□□□ 1.78
PNKP-209ENST00000596726 GGA3Q9NZ52 723 aa26.18■■□□□ 1.78
PNKP-209ENST00000596726 MYH13Q9UKX3 1938 aa26.18■■□□□ 1.78
PNKP-209ENST00000596726 MVPQ14764 893 aaKnown RBP26.17■■□□□ 1.78
PNKP-209ENST00000596726 KRT26Q7Z3Y9 468 aa26.17■■□□□ 1.78
PNKP-209ENST00000596726 ZBED3Q96IU2 234 aaPredicted RBP26.17■■□□□ 1.78
PNKP-209ENST00000596726 IQSEC3Q9UPP2 1182 aaPredicted RBP26.17■■□□□ 1.78
PNKP-209ENST00000596726 PITPNM2Q9BZ72 1349 aa26.16■■□□□ 1.78
PNKP-209ENST00000596726 WNT10BO00744 389 aa26.16■■□□□ 1.78
PNKP-209ENST00000596726 NBPF9Q3BBW0 867 aa26.16■■□□□ 1.78
PNKP-209ENST00000596726 ANGEL2Q5VTE6 544 aaKnown RBP26.16■■□□□ 1.78
PNKP-209ENST00000596726 MFSD14BQ5SR56 506 aa26.15■■□□□ 1.78
PNKP-209ENST00000596726 DLK2Q6UY11 383 aa26.15■■□□□ 1.78
PNKP-209ENST00000596726 JMYQ8N9B5 988 aa26.15■■□□□ 1.78
PNKP-209ENST00000596726 MTMR14Q8NCE2 650 aa26.15■■□□□ 1.78
PNKP-209ENST00000596726 ADM5C9JUS6 153 aa26.14■■□□□ 1.78
PNKP-209ENST00000596726 TFCP2Q12800 502 aa26.14■■□□□ 1.78
PNKP-209ENST00000596726 COG6Q9Y2V7 657 aa26.14■■□□□ 1.78
PNKP-209ENST00000596726 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.14■■□□□ 1.78
PNKP-209ENST00000596726 CNTNAP1P78357 1384 aa26.14■■□□□ 1.78
PNKP-209ENST00000596726 ECM29Q5VYK3 1845 aa26.14■■□□□ 1.77
PNKP-209ENST00000596726 F8W031 263 aaPredicted RBP26.13■■□□□ 1.77
PNKP-209ENST00000596726 ZBTB22O15209 634 aa26.13■■□□□ 1.77
PNKP-209ENST00000596726 CELF2O95319 508 aaKnown RBP26.13■■□□□ 1.77
PNKP-209ENST00000596726 PDE3AQ14432 1141 aa26.13■■□□□ 1.77
PNKP-209ENST00000596726 SULF1Q8IWU6 871 aa26.13■■□□□ 1.77
PNKP-209ENST00000596726 DDX19BQ9UMR2 479 aa26.13■■□□□ 1.77
PNKP-209ENST00000596726 RASSF10A6NK89 507 aa26.12■■□□□ 1.77
PNKP-209ENST00000596726 FRAT2O75474 233 aaPredicted RBP26.12■■□□□ 1.77
PNKP-209ENST00000596726 TIMM10P62072 90 aa26.12■■□□□ 1.77
PNKP-209ENST00000596726 CHAF1AQ13111 956 aaPredicted RBP26.12■■□□□ 1.77
PNKP-209ENST00000596726 G3BP1Q13283 466 aaKnown RBP eCLIP26.12■■□□□ 1.77
PNKP-209ENST00000596726 CEP85Q6P2H3 762 aa26.12■■□□□ 1.77
PNKP-209ENST00000596726 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.12■■□□□ 1.77
PNKP-209ENST00000596726 TBC1D22AQ8WUA7 517 aa26.12■■□□□ 1.77
PNKP-209ENST00000596726 YTHDC1Q96MU7 727 aaKnown RBP26.12■■□□□ 1.77
PNKP-209ENST00000596726 MKRN1Q9UHC7 482 aaKnown RBP26.12■■□□□ 1.77
PNKP-209ENST00000596726 AKAP2Q9Y2D5 859 aa26.12■■□□□ 1.77
PNKP-209ENST00000596726 A0A1B0GUL7 405 aa26.1■■□□□ 1.77
PNKP-209ENST00000596726 ADORA1P30542 326 aa26.1■■□□□ 1.77
PNKP-209ENST00000596726 DLGAP5Q15398 846 aa26.1■■□□□ 1.77
PNKP-209ENST00000596726 GRIK5Q16478 980 aa26.1■■□□□ 1.77
PNKP-209ENST00000596726 C20orf194Q5TEA3 1177 aa26.1■■□□□ 1.77
PNKP-209ENST00000596726 ZBTB40Q9NUA8 1239 aa26.1■■□□□ 1.77
PNKP-209ENST00000596726 NOP58Q9Y2X3 529 aaKnown RBP26.1■■□□□ 1.77
PNKP-209ENST00000596726 PCDHAC2Q9Y5I4 1007 aa26.1■■□□□ 1.77
PNKP-209ENST00000596726 TLL2Q9Y6L7 1015 aa26.1■■□□□ 1.77
PNKP-209ENST00000596726 PHKA1P46020 1223 aa26.09■■□□□ 1.77
PNKP-209ENST00000596726 DEFB115Q30KQ5 88 aa26.09■■□□□ 1.77
PNKP-209ENST00000596726 CFAP100Q494V2 611 aa26.09■■□□□ 1.77
PNKP-209ENST00000596726 ZNF408Q9H9D4 720 aa26.09■■□□□ 1.77
PNKP-209ENST00000596726 ABT1Q9ULW3 272 aaKnown RBP26.09■■□□□ 1.77
PNKP-209ENST00000596726 TTF2Q9UNY4 1162 aaKnown RBP26.09■■□□□ 1.77
PNKP-209ENST00000596726 COL1A1P02452 1464 aaPredicted RBP26.09■■□□□ 1.77
PNKP-209ENST00000596726 SPDYE2BA6NHP3 402 aa26.08■■□□□ 1.77
PNKP-209ENST00000596726 SPDYE6P0CI01 402 aa26.08■■□□□ 1.77
PNKP-209ENST00000596726 PCNTO95613 3336 aa26.08■■□□□ 1.76
PNKP-209ENST00000596726 SURF6O75683 361 aaKnown RBP26.07■■□□□ 1.76
PNKP-209ENST00000596726 CCDC102BQ68D86 513 aa26.07■■□□□ 1.76
PNKP-209ENST00000596726 SAPCD2Q86UD0 394 aa26.07■■□□□ 1.76
PNKP-209ENST00000596726 CDCA5Q96FF9 252 aa26.07■■□□□ 1.76
PNKP-209ENST00000596726 XAGE2Q96GT9 111 aa26.07■■□□□ 1.76
PNKP-209ENST00000596726 PRMT6Q96LA8 375 aaPredicted RBP26.07■■□□□ 1.76
PNKP-209ENST00000596726 GNL3LQ9NVN8 582 aaKnown RBP26.07■■□□□ 1.76
PNKP-209ENST00000596726 SERPINA10Q9UK55 444 aa26.07■■□□□ 1.76
PNKP-209ENST00000596726 SCAF8Q9UPN6 1271 aaKnown RBP26.07■■□□□ 1.76
PNKP-209ENST00000596726 SUGT1Q9Y2Z0 365 aa26.07■■□□□ 1.76
PNKP-209ENST00000596726 SEMA3EO15041 775 aa26.06■■□□□ 1.76
PNKP-209ENST00000596726 VEGFBP49765 207 aa26.06■■□□□ 1.76
PNKP-209ENST00000596726 WDR66Q8TBY9 1149 aa26.06■■□□□ 1.76
PNKP-209ENST00000596726 CHMP4BQ9H444 224 aaKnown RBP26.06■■□□□ 1.76
PNKP-209ENST00000596726 HDLBPQ00341 1268 aaKnown RBP26.05■■□□□ 1.76
PNKP-209ENST00000596726 APOBEC3FQ8IUX4 373 aaKnown RBP26.05■■□□□ 1.76
PNKP-209ENST00000596726 GPR108Q9NPR9 543 aa26.05■■□□□ 1.76
PNKP-209ENST00000596726 DENND2AQ9ULE3 1009 aa26.05■■□□□ 1.76
PNKP-209ENST00000596726 RPAP2Q8IXW5 612 aaPredicted RBP26.04■■□□□ 1.76
PNKP-209ENST00000596726 HHIPL1Q96JK4 782 aa26.04■■□□□ 1.76
PNKP-209ENST00000596726 NEUROD6Q96NK8 337 aa26.04■■□□□ 1.76
PNKP-209ENST00000596726 MRIQ9BWK5 157 aa26.04■■□□□ 1.76
PNKP-209ENST00000596726 AOX1Q06278 1338 aa26.04■■□□□ 1.76
PNKP-209ENST00000596726 CRKP46108 304 aa26.03■■□□□ 1.76
PNKP-209ENST00000596726 RBM5P52756 815 aaKnown RBP eCLIP26.03■■□□□ 1.76
PNKP-209ENST00000596726 GBA2Q9HCG7 927 aaPredicted RBP26.03■■□□□ 1.76
PNKP-209ENST00000596726 OS9Q13438 667 aaPredicted RBP26.02■■□□□ 1.76
PNKP-209ENST00000596726 SALL1Q9NSC2 1324 aa26.02■■□□□ 1.76
PNKP-209ENST00000596726 MYO1BO43795 1136 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 505.8 ms