RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 MTMR14Q8NCE2 650 aa20.16■□□□□ 0.82
USHBP1-206ENST00000596436 MPHOSPH8Q99549 860 aa20.16■□□□□ 0.82
USHBP1-206ENST00000596436 CD209Q9NNX6 404 aa20.16■□□□□ 0.82
USHBP1-206ENST00000596436 HDAC9Q9UKV0 1011 aa20.16■□□□□ 0.82
USHBP1-206ENST00000596436 TBC1D8O95759 1140 aa20.15■□□□□ 0.82
USHBP1-206ENST00000596436 GTF2IP78347 998 aa20.15■□□□□ 0.82
USHBP1-206ENST00000596436 PTPN12Q05209 780 aaKnown RBP20.15■□□□□ 0.82
USHBP1-206ENST00000596436 BEND3Q5T5X7 828 aa20.15■□□□□ 0.82
USHBP1-206ENST00000596436 FBXW7Q969H0 707 aa20.15■□□□□ 0.82
USHBP1-206ENST00000596436 HPS5Q9UPZ3 1129 aa20.15■□□□□ 0.82
USHBP1-206ENST00000596436 SSC5DA1L4H1 1573 aa20.15■□□□□ 0.82
USHBP1-206ENST00000596436 RARSP54136 660 aaKnown RBP20.14■□□□□ 0.81
USHBP1-206ENST00000596436 FOXO4P98177 505 aa20.14■□□□□ 0.81
USHBP1-206ENST00000596436 TTLL12Q14166 644 aaPredicted RBP20.14■□□□□ 0.81
USHBP1-206ENST00000596436 CERS5Q8N5B7 392 aa20.14■□□□□ 0.81
USHBP1-206ENST00000596436 PTPRCP08575 1304 aa20.13■□□□□ 0.81
USHBP1-206ENST00000596436 ANKRD18BA2A2Z9 1011 aa20.13■□□□□ 0.81
USHBP1-206ENST00000596436 GPR25O00155 361 aa20.13■□□□□ 0.81
USHBP1-206ENST00000596436 SREBF2Q12772 1141 aa20.13■□□□□ 0.81
USHBP1-206ENST00000596436 MAP3K11Q16584 847 aa20.13■□□□□ 0.81
USHBP1-206ENST00000596436 ARMC9Q7Z3E5 817 aa20.13■□□□□ 0.81
USHBP1-206ENST00000596436 SNAP23O00161 211 aa20.12■□□□□ 0.81
USHBP1-206ENST00000596436 IL1R1P14778 569 aa20.12■□□□□ 0.81
USHBP1-206ENST00000596436 FKBP1AP62942 108 aaKnown RBP20.12■□□□□ 0.81
USHBP1-206ENST00000596436 SPRYD7Q5W111 196 aa20.12■□□□□ 0.81
USHBP1-206ENST00000596436 DEFB129Q9H1M3 183 aa20.12■□□□□ 0.81
USHBP1-206ENST00000596436 SLC4A10Q6U841 1118 aa20.11■□□□□ 0.81
USHBP1-206ENST00000596436 PPP2R3BQ9Y5P8 575 aa20.11■□□□□ 0.81
USHBP1-206ENST00000596436 UNCXA6NJT0 531 aa20.1■□□□□ 0.81
USHBP1-206ENST00000596436 KCNJ4P48050 445 aa20.1■□□□□ 0.81
USHBP1-206ENST00000596436 DLGAP5Q15398 846 aa20.1■□□□□ 0.81
USHBP1-206ENST00000596436 TAF5LO75529 589 aa20.09■□□□□ 0.81
USHBP1-206ENST00000596436 MKRN3Q13064 507 aaKnown RBP20.09■□□□□ 0.81
USHBP1-206ENST00000596436 IFIT5Q13325 482 aaKnown RBP20.09■□□□□ 0.81
USHBP1-206ENST00000596436 FBXO46Q6PJ61 603 aaPredicted RBP20.09■□□□□ 0.81
USHBP1-206ENST00000596436 R3HDMLQ9H3Y0 253 aa20.09■□□□□ 0.81
USHBP1-206ENST00000596436 NOB1Q9ULX3 412 aaKnown RBP20.09■□□□□ 0.81
USHBP1-206ENST00000596436 ANGEL1Q9UNK9 670 aaKnown RBP20.09■□□□□ 0.81
USHBP1-206ENST00000596436 ARAP2Q8WZ64 1704 aa20.08■□□□□ 0.81
USHBP1-206ENST00000596436 SPDYE2BA6NHP3 402 aa20.08■□□□□ 0.81
USHBP1-206ENST00000596436 BCAR3O75815 825 aa20.08■□□□□ 0.81
USHBP1-206ENST00000596436 SPDYE6P0CI01 402 aa20.08■□□□□ 0.81
USHBP1-206ENST00000596436 ZBTB48P10074 688 aaPredicted RBP20.08■□□□□ 0.81
USHBP1-206ENST00000596436 PRKG1Q13976 671 aa20.08■□□□□ 0.81
USHBP1-206ENST00000596436 HELBQ8NG08 1087 aaPredicted RBP20.08■□□□□ 0.81
USHBP1-206ENST00000596436 PCDHAC2Q9Y5I4 1007 aa20.08■□□□□ 0.81
USHBP1-206ENST00000596436 MANSC4A6NHS7 340 aaPredicted RBP20.07■□□□□ 0.8
USHBP1-206ENST00000596436 FKTNO75072 461 aa20.07■□□□□ 0.8
USHBP1-206ENST00000596436 ALDH1L1O75891 902 aa20.07■□□□□ 0.8
USHBP1-206ENST00000596436 ALDH1A1P00352 501 aa20.07■□□□□ 0.8
USHBP1-206ENST00000596436 INHBEP58166 350 aa20.07■□□□□ 0.8
USHBP1-206ENST00000596436 EPHA10Q5JZY3 1008 aa20.07■□□□□ 0.8
USHBP1-206ENST00000596436 ZNF804AQ7Z570 1209 aa20.07■□□□□ 0.8
USHBP1-206ENST00000596436 SRCIN1Q9C0H9 1055 aa20.07■□□□□ 0.8
USHBP1-206ENST00000596436 FZD1Q9UP38 647 aa20.07■□□□□ 0.8
USHBP1-206ENST00000596436 AOX1Q06278 1338 aa20.06■□□□□ 0.8
USHBP1-206ENST00000596436 CFAP100Q494V2 611 aa20.06■□□□□ 0.8
USHBP1-206ENST00000596436 PRMT6Q96LA8 375 aaPredicted RBP20.06■□□□□ 0.8
USHBP1-206ENST00000596436 FAM205AQ6ZU69 1335 aa20.05■□□□□ 0.8
USHBP1-206ENST00000596436 KIF16BQ96L93 1317 aa20.05■□□□□ 0.8
USHBP1-206ENST00000596436 PRPF38BQ5VTL8 546 aaKnown RBP20.05■□□□□ 0.8
USHBP1-206ENST00000596436 LMBR1LQ6UX01 489 aa20.05■□□□□ 0.8
USHBP1-206ENST00000596436 IFNL1Q8IU54 200 aa20.05■□□□□ 0.8
USHBP1-206ENST00000596436 WNK4Q96J92 1243 aa20.05■□□□□ 0.8
USHBP1-206ENST00000596436 OTOFQ9HC10 1997 aa20.04■□□□□ 0.8
USHBP1-206ENST00000596436 CENPFP49454 3210 aa20.04■□□□□ 0.8
USHBP1-206ENST00000596436 GRM8O00222 908 aa20.04■□□□□ 0.8
USHBP1-206ENST00000596436 PPP1R12BO60237 982 aaPredicted RBP20.04■□□□□ 0.8
USHBP1-206ENST00000596436 SLC10A4Q96EP9 437 aa20.04■□□□□ 0.8
USHBP1-206ENST00000596436 CLMNQ96JQ2 1002 aa20.04■□□□□ 0.8
USHBP1-206ENST00000596436 PCDH10Q9P2E7 1040 aa20.04■□□□□ 0.8
USHBP1-206ENST00000596436 TNNQ9UQP3 1299 aa20.04■□□□□ 0.8
USHBP1-206ENST00000596436 IGF2BP3O00425 579 aaKnown RBP eCLIP20.03■□□□□ 0.8
USHBP1-206ENST00000596436 MYO1BO43795 1136 aa20.03■□□□□ 0.8
USHBP1-206ENST00000596436 SUPT20HL1Q3ZLR7 823 aa20.03■□□□□ 0.8
USHBP1-206ENST00000596436 LDHAL6AQ6ZMR3 332 aa20.03■□□□□ 0.8
USHBP1-206ENST00000596436 CLRN2A0PK11 232 aa20.02■□□□□ 0.8
USHBP1-206ENST00000596436 CCDC57Q2TAC2 916 aa20.02■□□□□ 0.8
USHBP1-206ENST00000596436 NBPF12Q5TAG4 269 aaPredicted RBP20.02■□□□□ 0.8
USHBP1-206ENST00000596436 TDRD7Q8NHU6 1098 aaKnown RBP20.02■□□□□ 0.8
USHBP1-206ENST00000596436 ZNF594Q96JF6 807 aaPredicted RBP20.02■□□□□ 0.8
USHBP1-206ENST00000596436 API5Q9BZZ5 524 aaKnown RBP20.02■□□□□ 0.8
USHBP1-206ENST00000596436 MKI67P46013 3256 aaKnown RBP20.01■□□□□ 0.79
USHBP1-206ENST00000596436 RBBP6Q7Z6E9 1792 aaKnown RBP20.01■□□□□ 0.79
USHBP1-206ENST00000596436 TESPA1A2RU30 521 aaPredicted RBP20.01■□□□□ 0.79
USHBP1-206ENST00000596436 F8W031 263 aaPredicted RBP20.01■□□□□ 0.79
USHBP1-206ENST00000596436 USP2O75604 605 aaPredicted RBP20.01■□□□□ 0.79
USHBP1-206ENST00000596436 NBPF7P0C2Y1 421 aaPredicted RBP20.01■□□□□ 0.79
USHBP1-206ENST00000596436 GJA5P36382 358 aa20.01■□□□□ 0.79
USHBP1-206ENST00000596436 UBE4AQ14139 1066 aa20.01■□□□□ 0.79
USHBP1-206ENST00000596436 C9orf78Q9NZ63 289 aaPredicted RBP20.01■□□□□ 0.79
USHBP1-206ENST00000596436 CHMP3Q9Y3E7 222 aa20.01■□□□□ 0.79
USHBP1-206ENST00000596436 UTYO14607 1347 aa20.01■□□□□ 0.79
USHBP1-206ENST00000596436 RASA3Q14644 834 aa20■□□□□ 0.79
USHBP1-206ENST00000596436 SPDYE2Q495Y8 402 aa20■□□□□ 0.79
USHBP1-206ENST00000596436 ARHGAP45Q92619 1136 aa20■□□□□ 0.79
USHBP1-206ENST00000596436 FRAT1Q92837 279 aaPredicted RBP20■□□□□ 0.79
USHBP1-206ENST00000596436 KAZALD1Q96I82 304 aa20■□□□□ 0.79
USHBP1-206ENST00000596436 YTHDC1Q96MU7 727 aaKnown RBP20■□□□□ 0.79
USHBP1-206ENST00000596436 SERPINA10Q9UK55 444 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms