RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 SPEF2Q9C093 1822 aa15.87■□□□□ 0.13
SHKBP1-209ENST00000595803 PPEF1O14829 653 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-209ENST00000595803 EIF5BO60841 1220 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-209ENST00000595803 CNKSR1Q969H4 720 aa15.86■□□□□ 0.13
SHKBP1-209ENST00000595803 HAUS7Q99871 368 aa15.86■□□□□ 0.13
SHKBP1-209ENST00000595803 LEMD3Q9Y2U8 911 aa15.86■□□□□ 0.13
SHKBP1-209ENST00000595803 ANKRD31Q8N7Z5 1873 aa15.86■□□□□ 0.13
SHKBP1-209ENST00000595803 SNAP23O00161 211 aa15.85■□□□□ 0.13
SHKBP1-209ENST00000595803 ATP2B4P23634 1241 aa15.85■□□□□ 0.13
SHKBP1-209ENST00000595803 CAVIN4Q5BKX8 364 aa15.85■□□□□ 0.13
SHKBP1-209ENST00000595803 PRPF38BQ5VTL8 546 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-209ENST00000595803 MAP1SQ66K74 1059 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-209ENST00000595803 CCDC102BQ68D86 513 aa15.85■□□□□ 0.13
SHKBP1-209ENST00000595803 CAPNS2Q96L46 248 aa15.85■□□□□ 0.13
SHKBP1-209ENST00000595803 DNAJC2Q99543 621 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-209ENST00000595803 NSFL1CQ9UNZ2 370 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-209ENST00000595803 CLEC11AQ9Y240 323 aa15.85■□□□□ 0.13
SHKBP1-209ENST00000595803 ATP6V0A2Q9Y487 856 aa15.85■□□□□ 0.13
SHKBP1-209ENST00000595803 ZNF804BA4D1E1 1349 aa15.85■□□□□ 0.13
SHKBP1-209ENST00000595803 COL4A1P02462 1669 aa15.84■□□□□ 0.13
SHKBP1-209ENST00000595803 GPSM2P81274 684 aa15.84■□□□□ 0.13
SHKBP1-209ENST00000595803 GRM1Q13255 1194 aa15.84■□□□□ 0.13
SHKBP1-209ENST00000595803 PAXIP1Q6ZW49 1069 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-209ENST00000595803 ZNF512BQ96KM6 892 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-209ENST00000595803 GNL3LQ9NVN8 582 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-209ENST00000595803 XDHP47989 1333 aa15.84■□□□□ 0.13
SHKBP1-209ENST00000595803 PHKA1P46020 1223 aa15.83■□□□□ 0.12
SHKBP1-209ENST00000595803 FKBP4Q02790 459 aaKnown RBP eCLIP15.83■□□□□ 0.12
SHKBP1-209ENST00000595803 CYP4F22Q6NT55 531 aa15.83■□□□□ 0.12
SHKBP1-209ENST00000595803 TBC1D9Q6ZT07 1266 aa15.83■□□□□ 0.12
SHKBP1-209ENST00000595803 VPS37DQ86XT2 251 aa15.83■□□□□ 0.12
SHKBP1-209ENST00000595803 GPR101Q96P66 508 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-209ENST00000595803 TSHZ2Q9NRE2 1034 aa15.83■□□□□ 0.12
SHKBP1-209ENST00000595803 HACL1Q9UJ83 578 aa15.83■□□□□ 0.12
SHKBP1-209ENST00000595803 GGA1Q9UJY5 639 aa15.83■□□□□ 0.12
SHKBP1-209ENST00000595803 EPHX2P34913 555 aa15.82■□□□□ 0.12
SHKBP1-209ENST00000595803 ECE1P42892 770 aa15.82■□□□□ 0.12
SHKBP1-209ENST00000595803 BCAMP50895 628 aa15.82■□□□□ 0.12
SHKBP1-209ENST00000595803 DGKZQ13574 1117 aa15.82■□□□□ 0.12
SHKBP1-209ENST00000595803 FSD1Q9BTV5 496 aa15.82■□□□□ 0.12
SHKBP1-209ENST00000595803 SNRKQ9NRH2 765 aa15.82■□□□□ 0.12
SHKBP1-209ENST00000595803 PAG1Q9NWQ8 432 aa15.82■□□□□ 0.12
SHKBP1-209ENST00000595803 ZNF541Q9H0D2 1346 aa15.82■□□□□ 0.12
SHKBP1-209ENST00000595803 HIP1O00291 1037 aa15.81■□□□□ 0.12
SHKBP1-209ENST00000595803 GOLIM4O00461 696 aa15.81■□□□□ 0.12
SHKBP1-209ENST00000595803 CHMLP26374 656 aa15.81■□□□□ 0.12
SHKBP1-209ENST00000595803 ARID4AP29374 1257 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-209ENST00000595803 HIBADHP31937 336 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-209ENST00000595803 GYG1P46976 350 aa15.81■□□□□ 0.12
SHKBP1-209ENST00000595803 CACNA1SQ13698 1873 aa15.81■□□□□ 0.12
SHKBP1-209ENST00000595803 MPNDQ8N594 471 aa15.81■□□□□ 0.12
SHKBP1-209ENST00000595803 UPF2Q9HAU5 1272 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-209ENST00000595803 PODXL2Q9NZ53 605 aa15.81■□□□□ 0.12
SHKBP1-209ENST00000595803 CASP8AP2Q9UKL3 1982 aa15.8■□□□□ 0.12
SHKBP1-209ENST00000595803 WTIPA6NIX2 430 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-209ENST00000595803 C6orf229H3BNL8 230 aa15.8■□□□□ 0.12
SHKBP1-209ENST00000595803 UFL1O94874 794 aa15.8■□□□□ 0.12
SHKBP1-209ENST00000595803 ZAP70P43403 619 aa15.8■□□□□ 0.12
SHKBP1-209ENST00000595803 FBXO33Q7Z6M2 555 aa15.8■□□□□ 0.12
SHKBP1-209ENST00000595803 PNMA8AQ86V59 439 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-209ENST00000595803 RUFY2Q8WXA3 655 aa15.8■□□□□ 0.12
SHKBP1-209ENST00000595803 EDC3Q96F86 508 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-209ENST00000595803 FAM84BQ96KN1 310 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-209ENST00000595803 DIAPH3Q9NSV4 1193 aa15.8■□□□□ 0.12
SHKBP1-209ENST00000595803 NDUFB9Q9Y6M9 179 aa15.8■□□□□ 0.12
SHKBP1-209ENST00000595803 FRAT2O75474 233 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-209ENST00000595803 SEC24BO95487 1268 aa15.79■□□□□ 0.12
SHKBP1-209ENST00000595803 MFAP1P55081 439 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-209ENST00000595803 SOX10P56693 466 aa15.79■□□□□ 0.12
SHKBP1-209ENST00000595803 TTF1Q15361 905 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-209ENST00000595803 LRRFIP1Q32MZ4 808 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-209ENST00000595803 CC2D2BQ6DHV5 1058 aa15.79■□□□□ 0.12
SHKBP1-209ENST00000595803 PRPF40BQ6NWY9 871 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-209ENST00000595803 DPP8Q6V1X1 898 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-209ENST00000595803 TBC1D16Q8TBP0 767 aa15.79■□□□□ 0.12
SHKBP1-209ENST00000595803 SLX4Q8IY92 1834 aa15.79■□□□□ 0.12
SHKBP1-209ENST00000595803 CA12O43570 354 aa15.78■□□□□ 0.12
SHKBP1-209ENST00000595803 AOC2O75106 756 aa15.78■□□□□ 0.12
SHKBP1-209ENST00000595803 MCAMP43121 646 aa15.78■□□□□ 0.12
SHKBP1-209ENST00000595803 SCARF1Q14162 830 aa15.78■□□□□ 0.12
SHKBP1-209ENST00000595803 C15orf52Q6ZUT6 534 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-209ENST00000595803 TICAM2Q86XR7 235 aa15.78■□□□□ 0.12
SHKBP1-209ENST00000595803 KBTBD3Q8NAB2 608 aa15.78■□□□□ 0.12
SHKBP1-209ENST00000595803 SPATA5Q8NB90 893 aa15.78■□□□□ 0.12
SHKBP1-209ENST00000595803 HMG20BQ9P0W2 317 aa15.78■□□□□ 0.12
SHKBP1-209ENST00000595803 DENND2AQ9ULE3 1009 aa15.78■□□□□ 0.12
SHKBP1-209ENST00000595803 SEMA3EO15041 775 aa15.77■□□□□ 0.12
SHKBP1-209ENST00000595803 KLRK1P26718 216 aa15.77■□□□□ 0.12
SHKBP1-209ENST00000595803 FMR1Q06787 632 aaKnown RBP eCLIP15.77■□□□□ 0.12
SHKBP1-209ENST00000595803 ZNF804AQ7Z570 1209 aa15.77■□□□□ 0.12
SHKBP1-209ENST00000595803 SLC51AQ86UW1 340 aa15.77■□□□□ 0.12
SHKBP1-209ENST00000595803 EYA3Q99504 573 aa15.77■□□□□ 0.12
SHKBP1-209ENST00000595803 ESYT1Q9BSJ8 1104 aa15.77■□□□□ 0.12
SHKBP1-209ENST00000595803 ZC3H12CQ9C0D7 883 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-209ENST00000595803 ANTXR1Q9H6X2 564 aa15.77■□□□□ 0.12
SHKBP1-209ENST00000595803 POLLQ9UGP5 575 aa15.77■□□□□ 0.12
SHKBP1-209ENST00000595803 WASHC4Q2M389 1173 aa15.76■□□□□ 0.11
SHKBP1-209ENST00000595803 GRIPAP1Q4V328 841 aa15.76■□□□□ 0.11
SHKBP1-209ENST00000595803 SOGA3Q5TF21 947 aa15.76■□□□□ 0.11
SHKBP1-209ENST00000595803 ZSCAN25Q6NSZ9 544 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms