RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 SCN4AP35499 1836 aa17.68■□□□□ 0.42
LIG1-208ENST00000595758 USP17L8P0C7I0 530 aa17.67■□□□□ 0.42
LIG1-208ENST00000595758 CHAF1AQ13111 956 aaPredicted RBP17.67■□□□□ 0.42
LIG1-208ENST00000595758 CCDC102BQ68D86 513 aa17.67■□□□□ 0.42
LIG1-208ENST00000595758 PNMA8AQ86V59 439 aaPredicted RBP17.67■□□□□ 0.42
LIG1-208ENST00000595758 KIF1BPQ96EK5 621 aa17.67■□□□□ 0.42
LIG1-208ENST00000595758 DCTPP1Q9H773 170 aa17.67■□□□□ 0.42
LIG1-208ENST00000595758 ADARB2Q9NS39 739 aaKnown RBP17.67■□□□□ 0.42
LIG1-208ENST00000595758 SHTN1A0MZ66 631 aa17.66■□□□□ 0.42
LIG1-208ENST00000595758 TOMM70O94826 608 aa17.66■□□□□ 0.42
LIG1-208ENST00000595758 FKBP1AP62942 108 aaKnown RBP17.66■□□□□ 0.42
LIG1-208ENST00000595758 EAPPQ56P03 285 aaPredicted RBP17.66■□□□□ 0.42
LIG1-208ENST00000595758 CERS5Q8N5B7 392 aa17.66■□□□□ 0.42
LIG1-208ENST00000595758 EAF2Q96CJ1 260 aaPredicted RBP17.66■□□□□ 0.42
LIG1-208ENST00000595758 IL1RAPL2Q9NP60 686 aa17.66■□□□□ 0.42
LIG1-208ENST00000595758 PSME4Q14997 1843 aa17.65■□□□□ 0.42
LIG1-208ENST00000595758 SEMA3EO15041 775 aa17.65■□□□□ 0.42
LIG1-208ENST00000595758 CENPBP07199 599 aaPredicted RBP17.65■□□□□ 0.42
LIG1-208ENST00000595758 ZNF280AP59817 542 aaPredicted RBP17.65■□□□□ 0.42
LIG1-208ENST00000595758 MFSD14BQ5SR56 506 aa17.65■□□□□ 0.42
LIG1-208ENST00000595758 USP50Q70EL3 339 aaPredicted RBP17.65■□□□□ 0.42
LIG1-208ENST00000595758 AACSQ86V21 672 aa17.65■□□□□ 0.42
LIG1-208ENST00000595758 CLASRPQ8N2M8 674 aaKnown RBP17.65■□□□□ 0.42
LIG1-208ENST00000595758 OGFOD1Q8N543 542 aa17.65■□□□□ 0.42
LIG1-208ENST00000595758 DBNDD2Q9BQY9 259 aa17.65■□□□□ 0.42
LIG1-208ENST00000595758 CCDC8Q9H0W5 538 aaPredicted RBP17.65■□□□□ 0.42
LIG1-208ENST00000595758 HDAC1Q13547 482 aaPredicted RBP17.64■□□□□ 0.41
LIG1-208ENST00000595758 SAMD7Q7Z3H4 446 aa17.64■□□□□ 0.41
LIG1-208ENST00000595758 KIAA0825Q8IV33 1275 aa17.64■□□□□ 0.41
LIG1-208ENST00000595758 RBM46Q8TBY0 533 aaKnown RBP17.64■□□□□ 0.41
LIG1-208ENST00000595758 TBC1D22AQ8WUA7 517 aa17.64■□□□□ 0.41
LIG1-208ENST00000595758 BCL11AQ9H165 835 aa17.64■□□□□ 0.41
LIG1-208ENST00000595758 DENND2AQ9ULE3 1009 aa17.64■□□□□ 0.41
LIG1-208ENST00000595758 CLEC11AQ9Y240 323 aa17.64■□□□□ 0.41
LIG1-208ENST00000595758 ZBTB22O15209 634 aa17.63■□□□□ 0.41
LIG1-208ENST00000595758 POTEIP0CG38 1075 aa17.63■□□□□ 0.41
LIG1-208ENST00000595758 POTEJP0CG39 1038 aa17.63■□□□□ 0.41
LIG1-208ENST00000595758 MMP14P50281 582 aa17.63■□□□□ 0.41
LIG1-208ENST00000595758 TBC1D10BQ4KMP7 808 aaPredicted RBP17.63■□□□□ 0.41
LIG1-208ENST00000595758 CCDC158Q5M9N0 1113 aa17.63■□□□□ 0.41
LIG1-208ENST00000595758 RBM26Q5T8P6 1007 aaKnown RBP17.63■□□□□ 0.41
LIG1-208ENST00000595758 LDHDQ86WU2 507 aa17.63■□□□□ 0.41
LIG1-208ENST00000595758 WDR66Q8TBY9 1149 aa17.63■□□□□ 0.41
LIG1-208ENST00000595758 LRRCC1Q9C099 1032 aa17.63■□□□□ 0.41
LIG1-208ENST00000595758 DBNLQ9UJU6 430 aaKnown RBP17.63■□□□□ 0.41
LIG1-208ENST00000595758 HDAC9Q9UKV0 1011 aa17.63■□□□□ 0.41
LIG1-208ENST00000595758 ARAP2Q8WZ64 1704 aa17.62■□□□□ 0.41
LIG1-208ENST00000595758 F8W031 263 aaPredicted RBP17.62■□□□□ 0.41
LIG1-208ENST00000595758 UQCRFS1P1P0C7P4 283 aa17.62■□□□□ 0.41
LIG1-208ENST00000595758 HIRAP54198 1017 aaPredicted RBP17.62■□□□□ 0.41
LIG1-208ENST00000595758 RASGRF1Q13972 1273 aa17.62■□□□□ 0.41
LIG1-208ENST00000595758 TTC39AQ5SRH9 613 aa17.62■□□□□ 0.41
LIG1-208ENST00000595758 TRPM4Q8TD43 1214 aa17.62■□□□□ 0.41
LIG1-208ENST00000595758 RWDD1Q9H446 243 aaPredicted RBP17.62■□□□□ 0.41
LIG1-208ENST00000595758 TLR7Q9NYK1 1049 aaKnown RBP17.62■□□□□ 0.41
LIG1-208ENST00000595758 EGFRP00533 1210 aa17.61■□□□□ 0.41
LIG1-208ENST00000595758 IFIT2P09913 472 aaKnown RBP17.61■□□□□ 0.41
LIG1-208ENST00000595758 KIF4BQ2VIQ3 1234 aa17.61■□□□□ 0.41
LIG1-208ENST00000595758 CHADLQ6NUI6 762 aa17.61■□□□□ 0.41
LIG1-208ENST00000595758 SMC1BQ8NDV3 1235 aa17.61■□□□□ 0.41
LIG1-208ENST00000595758 MYOZ2Q9NPC6 264 aa17.61■□□□□ 0.41
LIG1-208ENST00000595758 SMARCA5O60264 1052 aaPredicted RBP17.6■□□□□ 0.41
LIG1-208ENST00000595758 ARID4AP29374 1257 aaPredicted RBP17.6■□□□□ 0.41
LIG1-208ENST00000595758 TTF2Q9UNY4 1162 aaKnown RBP17.6■□□□□ 0.41
LIG1-208ENST00000595758 PDS5AQ29RF7 1337 aaKnown RBP17.6■□□□□ 0.41
LIG1-208ENST00000595758 COL1A1P02452 1464 aaPredicted RBP17.6■□□□□ 0.41
LIG1-208ENST00000595758 ZNF646O15015 1829 aaPredicted RBP17.6■□□□□ 0.41
LIG1-208ENST00000595758 FSTL1Q12841 308 aa17.59■□□□□ 0.41
LIG1-208ENST00000595758 GRIK5Q16478 980 aa17.59■□□□□ 0.41
LIG1-208ENST00000595758 SPATA5Q8NB90 893 aa17.59■□□□□ 0.41
LIG1-208ENST00000595758 ZC3H15Q8WU90 426 aaKnown RBP17.59■□□□□ 0.41
LIG1-208ENST00000595758 ZNF512BQ96KM6 892 aaPredicted RBP17.59■□□□□ 0.41
LIG1-208ENST00000595758 HMG20BQ9P0W2 317 aa17.59■□□□□ 0.41
LIG1-208ENST00000595758 SUGT1Q9Y2Z0 365 aa17.59■□□□□ 0.41
LIG1-208ENST00000595758 SALL1Q9NSC2 1324 aa17.58■□□□□ 0.4
LIG1-208ENST00000595758 MCAMP43121 646 aa17.58■□□□□ 0.4
LIG1-208ENST00000595758 C1QTNF8P60827 252 aa17.58■□□□□ 0.4
LIG1-208ENST00000595758 SCARF1Q14162 830 aa17.58■□□□□ 0.4
LIG1-208ENST00000595758 GCC1Q96CN9 775 aa17.58■□□□□ 0.4
LIG1-208ENST00000595758 DLGAP5Q15398 846 aa17.57■□□□□ 0.4
LIG1-208ENST00000595758 MAP1SQ66K74 1059 aaPredicted RBP17.57■□□□□ 0.4
LIG1-208ENST00000595758 PI16Q6UXB8 463 aa17.57■□□□□ 0.4
LIG1-208ENST00000595758 ZGPATQ8N5A5 531 aaKnown RBP17.57■□□□□ 0.4
LIG1-208ENST00000595758 SNRKQ9NRH2 765 aa17.57■□□□□ 0.4
LIG1-208ENST00000595758 PGAP2Q9UHJ9 254 aa17.57■□□□□ 0.4
LIG1-208ENST00000595758 IGHDP01880 384 aa17.56■□□□□ 0.4
LIG1-208ENST00000595758 LDHBP07195 334 aaKnown RBP17.56■□□□□ 0.4
LIG1-208ENST00000595758 RBM5P52756 815 aaKnown RBP eCLIP17.56■□□□□ 0.4
LIG1-208ENST00000595758 CFAP100Q494V2 611 aa17.56■□□□□ 0.4
LIG1-208ENST00000595758 SPTY2D1Q68D10 685 aaPredicted RBP17.56■□□□□ 0.4
LIG1-208ENST00000595758 CNTROBQ8N137 903 aa17.56■□□□□ 0.4
LIG1-208ENST00000595758 MTMR14Q8NCE2 650 aa17.56■□□□□ 0.4
LIG1-208ENST00000595758 ZBTB47Q9UFB7 747 aaPredicted RBP17.56■□□□□ 0.4
LIG1-208ENST00000595758 ABCF2Q9UG63 623 aa17.56■□□□□ 0.4
LIG1-208ENST00000595758 SERPINA10Q9UK55 444 aa17.56■□□□□ 0.4
LIG1-208ENST00000595758 MYH13Q9UKX3 1938 aa17.55■□□□□ 0.4
LIG1-208ENST00000595758 MAST3O60307 1309 aa17.55■□□□□ 0.4
LIG1-208ENST00000595758 WNT10BO00744 389 aa17.55■□□□□ 0.4
LIG1-208ENST00000595758 CRKP46108 304 aa17.55■□□□□ 0.4
LIG1-208ENST00000595758 HDLBPQ00341 1268 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms