RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 AGBL3Q8NEM8 1001 aa17.06■□□□□ 0.32
SHKBP1-207ENST00000595631 NOP58Q9Y2X3 529 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-207ENST00000595631 MYO5AQ9Y4I1 1855 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-207ENST00000595631 H7C1D1 291 aa17.05■□□□□ 0.32
SHKBP1-207ENST00000595631 CHAF1AQ13111 956 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-207ENST00000595631 PNMA8AQ86V59 439 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-207ENST00000595631 LDHDQ86WU2 507 aa17.05■□□□□ 0.32
SHKBP1-207ENST00000595631 SMC1BQ8NDV3 1235 aa17.05■□□□□ 0.32
SHKBP1-207ENST00000595631 AKAP11Q9UKA4 1901 aa17.05■□□□□ 0.32
SHKBP1-207ENST00000595631 TRPM7Q96QT4 1865 aa17.05■□□□□ 0.32
SHKBP1-207ENST00000595631 PHKA1P46020 1223 aa17.04■□□□□ 0.32
SHKBP1-207ENST00000595631 MAP1SQ66K74 1059 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-207ENST00000595631 CHADLQ6NUI6 762 aa17.04■□□□□ 0.32
SHKBP1-207ENST00000595631 USP50Q70EL3 339 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-207ENST00000595631 KIAA0825Q8IV33 1275 aa17.04■□□□□ 0.32
SHKBP1-207ENST00000595631 XAGE2Q96GT9 111 aa17.04■□□□□ 0.32
SHKBP1-207ENST00000595631 NEUROD6Q96NK8 337 aa17.04■□□□□ 0.32
SHKBP1-207ENST00000595631 FAM205AQ6ZU69 1335 aa17.03■□□□□ 0.32
SHKBP1-207ENST00000595631 F8W031 263 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-207ENST00000595631 APBB1O00213 710 aa17.03■□□□□ 0.32
SHKBP1-207ENST00000595631 USP17L8P0C7I0 530 aa17.03■□□□□ 0.32
SHKBP1-207ENST00000595631 ZNF280AP59817 542 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-207ENST00000595631 AKAP2Q9Y2D5 859 aa17.03■□□□□ 0.32
SHKBP1-207ENST00000595631 ASTN2O75129 1339 aaPredicted RBP17.02■□□□□ 0.32
SHKBP1-207ENST00000595631 MYO3BQ8WXR4 1341 aa17.02■□□□□ 0.32
SHKBP1-207ENST00000595631 HMMRO75330 724 aa17.02■□□□□ 0.32
SHKBP1-207ENST00000595631 FRAT2O75474 233 aaPredicted RBP17.02■□□□□ 0.32
SHKBP1-207ENST00000595631 FSTL1Q12841 308 aa17.02■□□□□ 0.32
SHKBP1-207ENST00000595631 GRIK5Q16478 980 aa17.02■□□□□ 0.32
SHKBP1-207ENST00000595631 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.32
SHKBP1-207ENST00000595631 MFSD14BQ5SR56 506 aa17.02■□□□□ 0.32
SHKBP1-207ENST00000595631 CCDC102BQ68D86 513 aa17.02■□□□□ 0.32
SHKBP1-207ENST00000595631 PCDHB15Q9Y5E8 787 aa17.02■□□□□ 0.32
SHKBP1-207ENST00000595631 TNNI3KQ59H18 835 aa17.01■□□□□ 0.31
SHKBP1-207ENST00000595631 MYOZ2Q9NPC6 264 aa17.01■□□□□ 0.31
SHKBP1-207ENST00000595631 PCDHAC2Q9Y5I4 1007 aa17.01■□□□□ 0.31
SHKBP1-207ENST00000595631 FPGT-TNNI3KV9GXZ4 949 aa17.01■□□□□ 0.31
SHKBP1-207ENST00000595631 MYH2Q9UKX2 1941 aa17.01■□□□□ 0.31
SHKBP1-207ENST00000595631 FKBP1AP62942 108 aaKnown RBP17■□□□□ 0.31
SHKBP1-207ENST00000595631 IRX6P78412 446 aaPredicted RBP17■□□□□ 0.31
SHKBP1-207ENST00000595631 DBNDD2Q9BQY9 259 aa17■□□□□ 0.31
SHKBP1-207ENST00000595631 BCL11AQ9H165 835 aa17■□□□□ 0.31
SHKBP1-207ENST00000595631 IL1RAPL2Q9NP60 686 aa17■□□□□ 0.31
SHKBP1-207ENST00000595631 TLR7Q9NYK1 1049 aaKnown RBP17■□□□□ 0.31
SHKBP1-207ENST00000595631 ITGBL1O95965 494 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-207ENST00000595631 FMR1Q06787 632 aaKnown RBP eCLIP16.99■□□□□ 0.31
SHKBP1-207ENST00000595631 CNTROBQ8N137 903 aa16.99■□□□□ 0.31
SHKBP1-207ENST00000595631 EXOC6Q8TAG9 804 aa16.99■□□□□ 0.31
SHKBP1-207ENST00000595631 EAF2Q96CJ1 260 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-207ENST00000595631 GPR108Q9NPR9 543 aa16.99■□□□□ 0.31
SHKBP1-207ENST00000595631 NBPF9Q3BBW0 867 aa16.98■□□□□ 0.31
SHKBP1-207ENST00000595631 GORABQ5T7V8 394 aa16.98■□□□□ 0.31
SHKBP1-207ENST00000595631 DLK2Q6UY11 383 aa16.98■□□□□ 0.31
SHKBP1-207ENST00000595631 ERC1Q8IUD2 1116 aa16.98■□□□□ 0.31
SHKBP1-207ENST00000595631 OGFOD1Q8N543 542 aa16.98■□□□□ 0.31
SHKBP1-207ENST00000595631 RHPN1Q8TCX5 695 aa16.98■□□□□ 0.31
SHKBP1-207ENST00000595631 CCDC8Q9H0W5 538 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-207ENST00000595631 GNL3LQ9NVN8 582 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-207ENST00000595631 DBNLQ9UJU6 430 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-207ENST00000595631 AOX1Q06278 1338 aa16.97■□□□□ 0.31
SHKBP1-207ENST00000595631 TRAF5O00463 557 aa16.97■□□□□ 0.31
SHKBP1-207ENST00000595631 HSPA6P17066 643 aa16.97■□□□□ 0.31
SHKBP1-207ENST00000595631 RASGRF1Q13972 1273 aa16.97■□□□□ 0.31
SHKBP1-207ENST00000595631 SCARF1Q14162 830 aa16.97■□□□□ 0.31
SHKBP1-207ENST00000595631 HSP90AB4PQ58FF6 505 aa16.97■□□□□ 0.31
SHKBP1-207ENST00000595631 PI16Q6UXB8 463 aa16.97■□□□□ 0.31
SHKBP1-207ENST00000595631 GLIS2Q9BZE0 524 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-207ENST00000595631 GGA3Q9NZ52 723 aa16.97■□□□□ 0.31
SHKBP1-207ENST00000595631 PGAP2Q9UHJ9 254 aa16.97■□□□□ 0.31
SHKBP1-207ENST00000595631 HDAC9Q9UKV0 1011 aa16.97■□□□□ 0.31
SHKBP1-207ENST00000595631 TTF2Q9UNY4 1162 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-207ENST00000595631 SCAF8Q9UPN6 1271 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-207ENST00000595631 PASKQ96RG2 1323 aa16.96■□□□□ 0.31
SHKBP1-207ENST00000595631 HTRA3P83110 453 aa16.96■□□□□ 0.31
SHKBP1-207ENST00000595631 AACSQ86V21 672 aa16.96■□□□□ 0.31
SHKBP1-207ENST00000595631 DENND2AQ9ULE3 1009 aa16.96■□□□□ 0.31
SHKBP1-207ENST00000595631 MAST2Q6P0Q8 1798 aa16.96■□□□□ 0.31
SHKBP1-207ENST00000595631 ADM5C9JUS6 153 aa16.95■□□□□ 0.3
SHKBP1-207ENST00000595631 WNT10BO00744 389 aa16.95■□□□□ 0.3
SHKBP1-207ENST00000595631 SMARCA5O60264 1052 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-207ENST00000595631 CFAP100Q494V2 611 aa16.95■□□□□ 0.3
SHKBP1-207ENST00000595631 ANGEL2Q5VTE6 544 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-207ENST00000595631 WDR66Q8TBY9 1149 aa16.95■□□□□ 0.3
SHKBP1-207ENST00000595631 ZC3H15Q8WU90 426 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-207ENST00000595631 TBC1D22AQ8WUA7 517 aa16.95■□□□□ 0.3
SHKBP1-207ENST00000595631 KIF1BPQ96EK5 621 aa16.95■□□□□ 0.3
SHKBP1-207ENST00000595631 ZBED3Q96IU2 234 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-207ENST00000595631 HMG20BQ9P0W2 317 aa16.95■□□□□ 0.3
SHKBP1-207ENST00000595631 DOCK2Q92608 1830 aa16.95■□□□□ 0.3
SHKBP1-207ENST00000595631 SEMA3EO15041 775 aa16.94■□□□□ 0.3
SHKBP1-207ENST00000595631 RAB11FIP3O75154 756 aa16.94■□□□□ 0.3
SHKBP1-207ENST00000595631 ARID4AP29374 1257 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-207ENST00000595631 MCAMP43121 646 aa16.94■□□□□ 0.3
SHKBP1-207ENST00000595631 TTC39AQ5SRH9 613 aa16.94■□□□□ 0.3
SHKBP1-207ENST00000595631 USP48Q86UV5 1035 aa16.94■□□□□ 0.3
SHKBP1-207ENST00000595631 PRDX5P30044 214 aa16.93■□□□□ 0.3
SHKBP1-207ENST00000595631 APLP1P51693 650 aa16.93■□□□□ 0.3
SHKBP1-207ENST00000595631 RBM5P52756 815 aaKnown RBP eCLIP16.93■□□□□ 0.3
SHKBP1-207ENST00000595631 DLGAP5Q15398 846 aa16.93■□□□□ 0.3
SHKBP1-207ENST00000595631 PRMT6Q96LA8 375 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms