RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 NDUFB9Q9Y6M9 179 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 PAPPAQ13219 1627 aa15.42■□□□□ 0.06
VRK3-209ENST00000594948 GOLIM4O00461 696 aa15.42■□□□□ 0.06
VRK3-209ENST00000594948 DHX16O60231 1041 aaKnown RBP15.42■□□□□ 0.06
VRK3-209ENST00000594948 SLU7O95391 586 aaKnown RBP15.42■□□□□ 0.06
VRK3-209ENST00000594948 FDPSP14324 419 aaKnown RBP15.42■□□□□ 0.06
VRK3-209ENST00000594948 CCT2P78371 535 aaKnown RBP15.42■□□□□ 0.06
VRK3-209ENST00000594948 ARID5BQ14865 1188 aa15.42■□□□□ 0.06
VRK3-209ENST00000594948 NBPF11Q86T75 865 aa15.42■□□□□ 0.06
VRK3-209ENST00000594948 ECM29Q5VYK3 1845 aa15.42■□□□□ 0.06
VRK3-209ENST00000594948 ABCC12Q96J65 1359 aa15.42■□□□□ 0.06
VRK3-209ENST00000594948 NRDCO43847 1150 aa15.41■□□□□ 0.06
VRK3-209ENST00000594948 CHGBP05060 677 aa15.41■□□□□ 0.06
VRK3-209ENST00000594948 KRT28Q7Z3Y7 464 aa15.41■□□□□ 0.06
VRK3-209ENST00000594948 FILIP1Q7Z7B0 1213 aa15.41■□□□□ 0.06
VRK3-209ENST00000594948 ZNF592Q92610 1267 aa15.41■□□□□ 0.06
VRK3-209ENST00000594948 ORAI2Q96SN7 254 aa15.41■□□□□ 0.06
VRK3-209ENST00000594948 SDF4Q9BRK5 362 aa15.41■□□□□ 0.06
VRK3-209ENST00000594948 L2HGDHQ9H9P8 463 aa15.41■□□□□ 0.06
VRK3-209ENST00000594948 ZHX1Q9UKY1 873 aaPredicted RBP15.41■□□□□ 0.06
VRK3-209ENST00000594948 ZFYP08048 801 aaPredicted RBP15.4■□□□□ 0.06
VRK3-209ENST00000594948 NLRP12P59046 1061 aa15.4■□□□□ 0.06
VRK3-209ENST00000594948 STK38Q15208 465 aa15.4■□□□□ 0.06
VRK3-209ENST00000594948 ZRSR1Q15695 479 aaKnown RBP15.4■□□□□ 0.06
VRK3-209ENST00000594948 TIGD1Q96MW7 591 aa15.4■□□□□ 0.06
VRK3-209ENST00000594948 ZNF215Q9UL58 517 aaPredicted RBP15.4■□□□□ 0.06
VRK3-209ENST00000594948 NEDD4P46934 1319 aa15.4■□□□□ 0.06
VRK3-209ENST00000594948 EYA2O00167 538 aa15.4■□□□□ 0.06
VRK3-209ENST00000594948 IKBKBO14920 756 aa15.4■□□□□ 0.06
VRK3-209ENST00000594948 CCP110O43303 1012 aa15.4■□□□□ 0.06
VRK3-209ENST00000594948 IFIT1P09914 478 aaKnown RBP15.4■□□□□ 0.06
VRK3-209ENST00000594948 TAF3Q5VWG9 929 aa15.4■□□□□ 0.06
VRK3-209ENST00000594948 CREBRFQ8IUR6 639 aa15.4■□□□□ 0.06
VRK3-209ENST00000594948 NCOA5Q9HCD5 579 aaKnown RBP15.4■□□□□ 0.06
VRK3-209ENST00000594948 FBXO3Q9UK99 471 aa15.4■□□□□ 0.06
VRK3-209ENST00000594948 SPTLC2O15270 562 aa15.39■□□□□ 0.05
VRK3-209ENST00000594948 MYO1BO43795 1136 aa15.39■□□□□ 0.05
VRK3-209ENST00000594948 NDUFA8P51970 172 aa15.39■□□□□ 0.05
VRK3-209ENST00000594948 SF3A1Q15459 793 aaKnown RBP15.39■□□□□ 0.05
VRK3-209ENST00000594948 KRT222Q8N1A0 295 aa15.39■□□□□ 0.05
VRK3-209ENST00000594948 FBXO18Q8NFZ0 1043 aa15.39■□□□□ 0.05
VRK3-209ENST00000594948 C8orf76Q96K31 380 aa15.39■□□□□ 0.05
VRK3-209ENST00000594948 NEUROD6Q96NK8 337 aa15.39■□□□□ 0.05
VRK3-209ENST00000594948 CWC25Q9NXE8 425 aaPredicted RBP15.39■□□□□ 0.05
VRK3-209ENST00000594948 C1orf167Q5SNV9 1468 aa15.39■□□□□ 0.05
VRK3-209ENST00000594948 ATP5J2-PTCD1G3V325 749 aa15.38■□□□□ 0.05
VRK3-209ENST00000594948 PTCD1O75127 700 aaKnown RBP15.38■□□□□ 0.05
VRK3-209ENST00000594948 CMA1P23946 247 aa15.38■□□□□ 0.05
VRK3-209ENST00000594948 FOSBP53539 338 aa15.38■□□□□ 0.05
VRK3-209ENST00000594948 MYSM1Q5VVJ2 828 aa15.38■□□□□ 0.05
VRK3-209ENST00000594948 A0A1B0GVL5 298 aa15.38■□□□□ 0.05
VRK3-209ENST00000594948 SLC3A2P08195 630 aaKnown RBP15.38■□□□□ 0.05
VRK3-209ENST00000594948 NAA30Q147X3 362 aaPredicted RBP15.38■□□□□ 0.05
VRK3-209ENST00000594948 IMMTQ16891 758 aaKnown RBP15.38■□□□□ 0.05
VRK3-209ENST00000594948 KMT5BQ4FZB7 885 aa15.38■□□□□ 0.05
VRK3-209ENST00000594948 M0R2C6 588 aa15.37■□□□□ 0.05
VRK3-209ENST00000594948 GUCY1B3Q02153 619 aa15.37■□□□□ 0.05
VRK3-209ENST00000594948 DPCR1Q3MIW9 517 aa15.37■□□□□ 0.05
VRK3-209ENST00000594948 E4F1Q66K89 784 aaPredicted RBP15.37■□□□□ 0.05
VRK3-209ENST00000594948 MB21D2Q8IYB1 491 aaPredicted RBP15.37■□□□□ 0.05
VRK3-209ENST00000594948 CCDC191Q8NCU4 936 aa15.37■□□□□ 0.05
VRK3-209ENST00000594948 PPP1R13BQ96KQ4 1090 aa15.37■□□□□ 0.05
VRK3-209ENST00000594948 XPO4Q9C0E2 1151 aaKnown RBP15.37■□□□□ 0.05
VRK3-209ENST00000594948 NLRP2Q9NX02 1062 aa15.37■□□□□ 0.05
VRK3-209ENST00000594948 CLIC4Q9Y696 253 aa15.37■□□□□ 0.05
VRK3-209ENST00000594948 FAM237AA0A1B0GTK4 181 aa15.36■□□□□ 0.05
VRK3-209ENST00000594948 SFPQP23246 707 aaKnown RBP eCLIP15.36■□□□□ 0.05
VRK3-209ENST00000594948 NCAPHQ15003 741 aa15.36■□□□□ 0.05
VRK3-209ENST00000594948 CCDC93Q567U6 631 aa15.36■□□□□ 0.05
VRK3-209ENST00000594948 ARMCX5Q6P1M9 558 aa15.36■□□□□ 0.05
VRK3-209ENST00000594948 LMOD2Q6P5Q4 547 aa15.36■□□□□ 0.05
VRK3-209ENST00000594948 TRMT1Q9NXH9 659 aaKnown RBP15.36■□□□□ 0.05
VRK3-209ENST00000594948 A0A1B0GUL7 405 aa15.36■□□□□ 0.05
VRK3-209ENST00000594948 ZNF202O95125 648 aa15.36■□□□□ 0.05
VRK3-209ENST00000594948 TIMM10P62072 90 aa15.36■□□□□ 0.05
VRK3-209ENST00000594948 AXDND1Q5T1B0 1012 aaPredicted RBP15.36■□□□□ 0.05
VRK3-209ENST00000594948 ANO1Q5XXA6 986 aa15.36■□□□□ 0.05
VRK3-209ENST00000594948 SYNE3Q6ZMZ3 975 aa15.36■□□□□ 0.05
VRK3-209ENST00000594948 TMC6Q7Z403 805 aa15.36■□□□□ 0.05
VRK3-209ENST00000594948 RBM33Q96EV2 1170 aaKnown RBP15.36■□□□□ 0.05
VRK3-209ENST00000594948 IFNKQ9P0W0 207 aa15.36■□□□□ 0.05
VRK3-209ENST00000594948 ORC3Q9UBD5 711 aaPredicted RBP15.36■□□□□ 0.05
VRK3-209ENST00000594948 TUBE1Q9UJT0 475 aa15.36■□□□□ 0.05
VRK3-209ENST00000594948 NAP1L2Q9ULW6 460 aaPredicted RBP15.36■□□□□ 0.05
VRK3-209ENST00000594948 HPS5Q9UPZ3 1129 aa15.36■□□□□ 0.05
VRK3-209ENST00000594948 PHLPP2Q6ZVD8 1323 aa15.35■□□□□ 0.05
VRK3-209ENST00000594948 CPDO75976 1380 aa15.35■□□□□ 0.05
VRK3-209ENST00000594948 A0A0G2JLW4 131 aa15.35■□□□□ 0.05
VRK3-209ENST00000594948 CBFA2T2O43439 604 aa15.35■□□□□ 0.05
VRK3-209ENST00000594948 PRC1O43663 620 aa15.35■□□□□ 0.05
VRK3-209ENST00000594948 SLFN14P0C7P3 912 aa15.35■□□□□ 0.05
VRK3-209ENST00000594948 H2AFXP16104 143 aaPredicted RBP15.35■□□□□ 0.05
VRK3-209ENST00000594948 KIF23Q02241 960 aaPredicted RBP15.35■□□□□ 0.05
VRK3-209ENST00000594948 FCHSD1Q86WN1 690 aa15.35■□□□□ 0.05
VRK3-209ENST00000594948 NCOA7Q8NI08 942 aa15.35■□□□□ 0.05
VRK3-209ENST00000594948 OSBP2Q969R2 916 aa15.35■□□□□ 0.05
VRK3-209ENST00000594948 AKAP11Q9UKA4 1901 aa15.35■□□□□ 0.05
VRK3-209ENST00000594948 CHD4Q14839 1912 aa15.34■□□□□ 0.05
VRK3-209ENST00000594948 CYP27B1O15528 508 aa15.34■□□□□ 0.05
VRK3-209ENST00000594948 PPP6R2O75170 966 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms