RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 TADA3O75528 432 aa14.01□□□□□ -0.17
LIG1-207ENST00000594759 ANXA1P04083 346 aa14.01□□□□□ -0.17
LIG1-207ENST00000594759 RPSAP08865 295 aaKnown RBP14.01□□□□□ -0.17
LIG1-207ENST00000594759 SAFBQ15424 915 aaKnown RBP eCLIP14.01□□□□□ -0.17
LIG1-207ENST00000594759 TUBB8Q3ZCM7 444 aa14.01□□□□□ -0.17
LIG1-207ENST00000594759 SARM1Q6SZW1 724 aa14.01□□□□□ -0.17
LIG1-207ENST00000594759 TOM1L2Q6ZVM7 507 aa14.01□□□□□ -0.17
LIG1-207ENST00000594759 SRGAP1Q7Z6B7 1085 aa14.01□□□□□ -0.17
LIG1-207ENST00000594759 KIF4AO95239 1232 aa14.01□□□□□ -0.17
LIG1-207ENST00000594759 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
LIG1-207ENST00000594759 PPP1R42Q7Z4L9 355 aa14.01□□□□□ -0.17
LIG1-207ENST00000594759 PPP1R12AO14974 1030 aaPredicted RBP14□□□□□ -0.17
LIG1-207ENST00000594759 SGSM2O43147 1006 aa14□□□□□ -0.17
LIG1-207ENST00000594759 MYL5Q02045 173 aa14□□□□□ -0.17
LIG1-207ENST00000594759 MAP2K1Q02750 393 aaPredicted RBP14□□□□□ -0.17
LIG1-207ENST00000594759 CKAP4Q07065 602 aaKnown RBP14□□□□□ -0.17
LIG1-207ENST00000594759 CASP8Q14790 479 aa14□□□□□ -0.17
LIG1-207ENST00000594759 LRRC2Q9BYS8 371 aa14□□□□□ -0.17
LIG1-207ENST00000594759 BOLA2Q9H3K6 86 aa14□□□□□ -0.17
LIG1-207ENST00000594759 JADE2Q9NQC1 790 aa14□□□□□ -0.17
LIG1-207ENST00000594759 SAMM50Q9Y512 469 aa14□□□□□ -0.17
LIG1-207ENST00000594759 BTBD11A6QL63 1104 aa14□□□□□ -0.17
LIG1-207ENST00000594759 FBXW10Q5XX13 1052 aa14□□□□□ -0.17
LIG1-207ENST00000594759 NUP88Q99567 741 aaPredicted RBP14□□□□□ -0.17
LIG1-207ENST00000594759 TATP17735 454 aaPredicted RBP14□□□□□ -0.17
LIG1-207ENST00000594759 ATP8B2P98198 1209 aa14□□□□□ -0.17
LIG1-207ENST00000594759 ME3Q16798 604 aa14□□□□□ -0.17
LIG1-207ENST00000594759 RASEFQ8IZ41 740 aa14□□□□□ -0.17
LIG1-207ENST00000594759 SYKP43405 635 aa14□□□□□ -0.17
LIG1-207ENST00000594759 CAPZA3Q96KX2 299 aa14□□□□□ -0.17
LIG1-207ENST00000594759 ABCB6Q9NP58 842 aa14□□□□□ -0.17
LIG1-207ENST00000594759 C8orf76Q96K31 380 aa13.99□□□□□ -0.17
LIG1-207ENST00000594759 NAPGQ99747 312 aaPredicted RBP13.99□□□□□ -0.17
LIG1-207ENST00000594759 BUB1BO60566 1050 aaPredicted RBP13.99□□□□□ -0.17
LIG1-207ENST00000594759 FLIIQ13045 1269 aa13.99□□□□□ -0.17
LIG1-207ENST00000594759 E2F5Q15329 346 aa13.99□□□□□ -0.17
LIG1-207ENST00000594759 CHRNA2Q15822 529 aa13.99□□□□□ -0.17
LIG1-207ENST00000594759 WWC2Q6AWC2 1192 aa13.99□□□□□ -0.17
LIG1-207ENST00000594759 MAATS1Q7Z4T9 603 aa13.99□□□□□ -0.17
LIG1-207ENST00000594759 UNC5CLQ8IV45 518 aa13.99□□□□□ -0.17
LIG1-207ENST00000594759 DHX58Q96C10 678 aa13.99□□□□□ -0.17
LIG1-207ENST00000594759 TBC1D8O95759 1140 aa13.99□□□□□ -0.17
LIG1-207ENST00000594759 PAFAH1B1P43034 410 aa13.99□□□□□ -0.17
LIG1-207ENST00000594759 PIP4K2AP48426 406 aaPredicted RBP13.99□□□□□ -0.17
LIG1-207ENST00000594759 RALYLQ86SE5 291 aaKnown RBP13.99□□□□□ -0.17
LIG1-207ENST00000594759 DESI2Q9BSY9 194 aa13.99□□□□□ -0.17
LIG1-207ENST00000594759 ELF1P32519 619 aa13.98□□□□□ -0.17
LIG1-207ENST00000594759 PPFIA1Q13136 1202 aa13.98□□□□□ -0.17
LIG1-207ENST00000594759 MTX1Q13505 466 aa13.98□□□□□ -0.17
LIG1-207ENST00000594759 L2HGDHQ9H9P8 463 aa13.98□□□□□ -0.17
LIG1-207ENST00000594759 ECM2O94769 699 aaPredicted RBP13.98□□□□□ -0.17
LIG1-207ENST00000594759 HSPA2P54652 639 aa13.98□□□□□ -0.17
LIG1-207ENST00000594759 CCZ1BP86790 482 aa13.98□□□□□ -0.17
LIG1-207ENST00000594759 CCZ1P86791 482 aaPredicted RBP13.98□□□□□ -0.17
LIG1-207ENST00000594759 IQCA1Q86XH1 822 aa13.98□□□□□ -0.17
LIG1-207ENST00000594759 KCNG4Q8TDN1 519 aa13.98□□□□□ -0.17
LIG1-207ENST00000594759 PLEKHF1Q96S99 279 aa13.98□□□□□ -0.17
LIG1-207ENST00000594759 BAIAP2L1Q9UHR4 511 aa13.98□□□□□ -0.17
LIG1-207ENST00000594759 E4F1Q66K89 784 aaPredicted RBP13.98□□□□□ -0.17
LIG1-207ENST00000594759 LARGE1O95461 756 aa13.97□□□□□ -0.17
LIG1-207ENST00000594759 CHRM1P11229 460 aaPredicted RBP13.97□□□□□ -0.17
LIG1-207ENST00000594759 HNRNPH1P31943 449 aaKnown RBP13.97□□□□□ -0.17
LIG1-207ENST00000594759 SNCBQ16143 134 aa13.97□□□□□ -0.17
LIG1-207ENST00000594759 IMMTQ16891 758 aaKnown RBP13.97□□□□□ -0.17
LIG1-207ENST00000594759 CCDC102BQ68D86 513 aa13.97□□□□□ -0.17
LIG1-207ENST00000594759 CCDC8Q9H0W5 538 aaPredicted RBP13.97□□□□□ -0.17
LIG1-207ENST00000594759 ECHDC1Q9NTX5 307 aa13.97□□□□□ -0.17
LIG1-207ENST00000594759 GUCA1BQ9UMX6 200 aa13.97□□□□□ -0.17
LIG1-207ENST00000594759 PRDM15P57071 1507 aaPredicted RBP13.97□□□□□ -0.17
LIG1-207ENST00000594759 CREB3L3Q68CJ9 461 aa13.97□□□□□ -0.17
LIG1-207ENST00000594759 TACO1Q9BSH4 297 aaKnown RBP13.97□□□□□ -0.17
LIG1-207ENST00000594759 CDC23Q9UJX2 597 aa13.97□□□□□ -0.17
LIG1-207ENST00000594759 SPECC1Q5M775 1068 aa13.97□□□□□ -0.17
LIG1-207ENST00000594759 TTC19Q6DKK2 380 aaPredicted RBP13.97□□□□□ -0.17
LIG1-207ENST00000594759 NEUROD6Q96NK8 337 aa13.97□□□□□ -0.17
LIG1-207ENST00000594759 NEK1Q96PY6 1258 aa13.97□□□□□ -0.17
LIG1-207ENST00000594759 NEO1Q92859 1461 aa13.97□□□□□ -0.17
LIG1-207ENST00000594759 PNMA6EA0A0J9YXQ4 647 aa13.96□□□□□ -0.17
LIG1-207ENST00000594759 KRT28Q7Z3Y7 464 aa13.96□□□□□ -0.17
LIG1-207ENST00000594759 SPATS2Q86XZ4 545 aaKnown RBP13.96□□□□□ -0.17
LIG1-207ENST00000594759 SUGP1Q8IWZ8 645 aaKnown RBP13.96□□□□□ -0.17
LIG1-207ENST00000594759 ARMC2Q8NEN0 867 aa13.96□□□□□ -0.17
LIG1-207ENST00000594759 PUS7Q96PZ0 661 aaKnown RBP13.96□□□□□ -0.17
LIG1-207ENST00000594759 AKR1B15C9JRZ8 316 aaPredicted RBP13.96□□□□□ -0.17
LIG1-207ENST00000594759 PTCD1O75127 700 aaKnown RBP13.96□□□□□ -0.17
LIG1-207ENST00000594759 YEATS4O95619 227 aa13.96□□□□□ -0.17
LIG1-207ENST00000594759 ADKP55263 362 aaKnown RBP13.96□□□□□ -0.17
LIG1-207ENST00000594759 TAF7Q15545 349 aaPredicted RBP13.96□□□□□ -0.17
LIG1-207ENST00000594759 G2E3Q7L622 706 aa13.96□□□□□ -0.17
LIG1-207ENST00000594759 KCNH5Q8NCM2 988 aa13.96□□□□□ -0.17
LIG1-207ENST00000594759 CABLES1Q8TDN4 633 aa13.96□□□□□ -0.17
LIG1-207ENST00000594759 LRRC59Q96AG4 307 aaKnown RBP13.96□□□□□ -0.17
LIG1-207ENST00000594759 CALR3Q96L12 384 aaKnown RBP13.96□□□□□ -0.17
LIG1-207ENST00000594759 KAT6BQ8WYB5 2073 aa13.96□□□□□ -0.17
LIG1-207ENST00000594759 SLC8A1P32418 973 aa13.96□□□□□ -0.17
LIG1-207ENST00000594759 IRX1P78414 480 aaPredicted RBP13.96□□□□□ -0.17
LIG1-207ENST00000594759 HOMEZQ8IX15 550 aa13.96□□□□□ -0.17
LIG1-207ENST00000594759 SMARCC2Q8TAQ2 1214 aa13.96□□□□□ -0.17
LIG1-207ENST00000594759 IRAK4Q9NWZ3 460 aa13.96□□□□□ -0.17
LIG1-207ENST00000594759 CDC42BPBQ9Y5S2 1711 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms