RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 SIL1Q9H173 461 aa21.6■■□□□ 1.05
IRF3-208ENST00000594387 TLL2Q9Y6L7 1015 aa21.6■■□□□ 1.05
IRF3-208ENST00000594387 PITPNM2Q9BZ72 1349 aa21.59■■□□□ 1.05
IRF3-208ENST00000594387 CIAO1O76071 339 aa21.59■■□□□ 1.05
IRF3-208ENST00000594387 GRM1Q13255 1194 aa21.59■■□□□ 1.05
IRF3-208ENST00000594387 DLGAP5Q15398 846 aa21.59■■□□□ 1.05
IRF3-208ENST00000594387 WDR33Q9C0J8 1336 aaKnown RBP21.58■■□□□ 1.05
IRF3-208ENST00000594387 ADM5C9JUS6 153 aa21.58■■□□□ 1.05
IRF3-208ENST00000594387 F8W031 263 aaPredicted RBP21.58■■□□□ 1.05
IRF3-208ENST00000594387 SRGAP3O43295 1099 aa21.58■■□□□ 1.05
IRF3-208ENST00000594387 MYO1BO43795 1136 aa21.58■■□□□ 1.05
IRF3-208ENST00000594387 IL15P40933 162 aaPredicted RBP21.58■■□□□ 1.05
IRF3-208ENST00000594387 DZIP1LQ8IYY4 767 aaKnown RBP21.58■■□□□ 1.05
IRF3-208ENST00000594387 FAM205AQ6ZU69 1335 aa21.57■■□□□ 1.04
IRF3-208ENST00000594387 WNT10BO00744 389 aa21.57■■□□□ 1.04
IRF3-208ENST00000594387 MS4A1P11836 297 aa21.57■■□□□ 1.04
IRF3-208ENST00000594387 RBM5P52756 815 aaKnown RBP eCLIP21.57■■□□□ 1.04
IRF3-208ENST00000594387 NBPF9Q3BBW0 867 aa21.57■■□□□ 1.04
IRF3-208ENST00000594387 MFSD14BQ5SR56 506 aa21.57■■□□□ 1.04
IRF3-208ENST00000594387 TMEM57Q8N5G2 664 aa21.57■■□□□ 1.04
IRF3-208ENST00000594387 VGLL2Q8N8G2 317 aa21.57■■□□□ 1.04
IRF3-208ENST00000594387 LPIN2Q92539 896 aa21.57■■□□□ 1.04
IRF3-208ENST00000594387 AIDAQ96BJ3 306 aa21.57■■□□□ 1.04
IRF3-208ENST00000594387 GBA2Q9HCG7 927 aaPredicted RBP21.57■■□□□ 1.04
IRF3-208ENST00000594387 JAG2Q9Y219 1238 aa21.57■■□□□ 1.04
IRF3-208ENST00000594387 ARAP2Q8WZ64 1704 aa21.56■■□□□ 1.04
IRF3-208ENST00000594387 FBXO33Q7Z6M2 555 aa21.56■■□□□ 1.04
IRF3-208ENST00000594387 SAPCD2Q86UD0 394 aa21.56■■□□□ 1.04
IRF3-208ENST00000594387 TBC1D22AQ8WUA7 517 aa21.56■■□□□ 1.04
IRF3-208ENST00000594387 HHIPL1Q96JK4 782 aa21.56■■□□□ 1.04
IRF3-208ENST00000594387 CAPNS2Q96L46 248 aa21.56■■□□□ 1.04
IRF3-208ENST00000594387 COPRSQ9NQ92 184 aa21.56■■□□□ 1.04
IRF3-208ENST00000594387 ASTN2O75129 1339 aaPredicted RBP21.55■■□□□ 1.04
IRF3-208ENST00000594387 HSPA1AP0DMV8 641 aaKnown RBP21.55■■□□□ 1.04
IRF3-208ENST00000594387 HSPA1BP0DMV9 641 aaKnown RBP21.55■■□□□ 1.04
IRF3-208ENST00000594387 NF2P35240 595 aa21.55■■□□□ 1.04
IRF3-208ENST00000594387 CHAF1AQ13111 956 aaPredicted RBP21.55■■□□□ 1.04
IRF3-208ENST00000594387 APOBEC3FQ8IUX4 373 aaKnown RBP21.55■■□□□ 1.04
IRF3-208ENST00000594387 ITPRIPQ8IWB1 547 aa21.55■■□□□ 1.04
IRF3-208ENST00000594387 GNL3LQ9NVN8 582 aaKnown RBP21.55■■□□□ 1.04
IRF3-208ENST00000594387 TNNQ9UQP3 1299 aa21.55■■□□□ 1.04
IRF3-208ENST00000594387 HUNKP57058 714 aa21.54■■□□□ 1.04
IRF3-208ENST00000594387 ATP2B3Q16720 1220 aa21.54■■□□□ 1.04
IRF3-208ENST00000594387 ATG9AQ7Z3C6 839 aa21.54■■□□□ 1.04
IRF3-208ENST00000594387 CERS5Q8N5B7 392 aa21.54■■□□□ 1.04
IRF3-208ENST00000594387 CDCA5Q96FF9 252 aa21.54■■□□□ 1.04
IRF3-208ENST00000594387 BEGAINQ9BUH8 593 aa21.54■■□□□ 1.04
IRF3-208ENST00000594387 IQSEC3Q9UPP2 1182 aaPredicted RBP21.54■■□□□ 1.04
IRF3-208ENST00000594387 BCAMP50895 628 aa21.53■■□□□ 1.04
IRF3-208ENST00000594387 MAP2K1Q02750 393 aaPredicted RBP21.53■■□□□ 1.04
IRF3-208ENST00000594387 CYP4F22Q6NT55 531 aa21.53■■□□□ 1.04
IRF3-208ENST00000594387 TTF2Q9UNY4 1162 aaKnown RBP21.53■■□□□ 1.04
IRF3-208ENST00000594387 PA2G4Q9UQ80 394 aaKnown RBP21.53■■□□□ 1.04
IRF3-208ENST00000594387 AKAP2Q9Y2D5 859 aa21.53■■□□□ 1.04
IRF3-208ENST00000594387 CEP350Q5VT06 3117 aa21.53■■□□□ 1.04
IRF3-208ENST00000594387 FGFR2P21802 821 aa21.52■■□□□ 1.04
IRF3-208ENST00000594387 MTX1Q13505 466 aa21.52■■□□□ 1.04
IRF3-208ENST00000594387 CFAP100Q494V2 611 aa21.52■■□□□ 1.04
IRF3-208ENST00000594387 DLK2Q6UY11 383 aa21.52■■□□□ 1.04
IRF3-208ENST00000594387 MTMR14Q8NCE2 650 aa21.52■■□□□ 1.04
IRF3-208ENST00000594387 G3BP1Q13283 466 aaKnown RBP eCLIP21.51■■□□□ 1.03
IRF3-208ENST00000594387 TTLL12Q14166 644 aaPredicted RBP21.51■■□□□ 1.03
IRF3-208ENST00000594387 MAP2K2P36507 400 aa21.5■■□□□ 1.03
IRF3-208ENST00000594387 FKBP1BP68106 108 aa21.5■■□□□ 1.03
IRF3-208ENST00000594387 MAST3O60307 1309 aa21.5■■□□□ 1.03
IRF3-208ENST00000594387 RGMBQ6NW40 437 aa21.49■■□□□ 1.03
IRF3-208ENST00000594387 WDR66Q8TBY9 1149 aa21.49■■□□□ 1.03
IRF3-208ENST00000594387 CCDC102AQ96A19 550 aa21.49■■□□□ 1.03
IRF3-208ENST00000594387 SERPINA10Q9UK55 444 aa21.49■■□□□ 1.03
IRF3-208ENST00000594387 ZBED3Q96IU2 234 aaPredicted RBP21.48■■□□□ 1.03
IRF3-208ENST00000594387 VEZTQ9HBM0 779 aa21.48■■□□□ 1.03
IRF3-208ENST00000594387 SCAF8Q9UPN6 1271 aaKnown RBP21.48■■□□□ 1.03
IRF3-208ENST00000594387 PAPPA2Q9BXP8 1791 aa21.48■■□□□ 1.03
IRF3-208ENST00000594387 AKAP11Q9UKA4 1901 aa21.47■■□□□ 1.03
IRF3-208ENST00000594387 SPDYE2BA6NHP3 402 aa21.47■■□□□ 1.03
IRF3-208ENST00000594387 SPDYE6P0CI01 402 aa21.47■■□□□ 1.03
IRF3-208ENST00000594387 ZNF157P51786 506 aaPredicted RBP21.47■■□□□ 1.03
IRF3-208ENST00000594387 OS9Q13438 667 aaPredicted RBP21.47■■□□□ 1.03
IRF3-208ENST00000594387 TNFAIP1Q13829 316 aa21.47■■□□□ 1.03
IRF3-208ENST00000594387 PRMT6Q96LA8 375 aaPredicted RBP21.47■■□□□ 1.03
IRF3-208ENST00000594387 RCAN3Q9UKA8 241 aa21.47■■□□□ 1.03
IRF3-208ENST00000594387 SUGT1Q9Y2Z0 365 aa21.47■■□□□ 1.03
IRF3-208ENST00000594387 COL1A1P02452 1464 aaPredicted RBP21.46■■□□□ 1.03
IRF3-208ENST00000594387 ATP8B2P98198 1209 aa21.46■■□□□ 1.03
IRF3-208ENST00000594387 HDLBPQ00341 1268 aaKnown RBP21.46■■□□□ 1.03
IRF3-208ENST00000594387 NOGQ13253 232 aa21.46■■□□□ 1.03
IRF3-208ENST00000594387 GORABQ5T7V8 394 aa21.46■■□□□ 1.03
IRF3-208ENST00000594387 TEKT1Q969V4 418 aa21.46■■□□□ 1.03
IRF3-208ENST00000594387 NEUROD6Q96NK8 337 aa21.46■■□□□ 1.03
IRF3-208ENST00000594387 CHMP4BQ9H444 224 aaKnown RBP21.46■■□□□ 1.03
IRF3-208ENST00000594387 DENND2AQ9ULE3 1009 aa21.46■■□□□ 1.03
IRF3-208ENST00000594387 PPP2R3BQ9Y5P8 575 aa21.46■■□□□ 1.03
IRF3-208ENST00000594387 CLRN2A0PK11 232 aa21.45■■□□□ 1.02
IRF3-208ENST00000594387 SEMA3EO15041 775 aa21.45■■□□□ 1.02
IRF3-208ENST00000594387 CRKP46108 304 aa21.45■■□□□ 1.02
IRF3-208ENST00000594387 TFCP2Q12800 502 aa21.45■■□□□ 1.02
IRF3-208ENST00000594387 PRAMEF18Q5VWM3 479 aa21.45■■□□□ 1.02
IRF3-208ENST00000594387 ARMC9Q7Z3E5 817 aa21.45■■□□□ 1.02
IRF3-208ENST00000594387 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.45■■□□□ 1.02
IRF3-208ENST00000594387 DEFB129Q9H1M3 183 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms