RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 DOCK2Q92608 1830 aa18.27■□□□□ 0.52
VRK3-207ENST00000594092 MCCP23508 829 aa18.26■□□□□ 0.51
VRK3-207ENST00000594092 ADD2P35612 726 aa18.26■□□□□ 0.51
VRK3-207ENST00000594092 ZSCAN25Q6NSZ9 544 aa18.26■□□□□ 0.51
VRK3-207ENST00000594092 OSBP2Q969R2 916 aa18.26■□□□□ 0.51
VRK3-207ENST00000594092 SLX4Q8IY92 1834 aa18.26■□□□□ 0.51
VRK3-207ENST00000594092 PDS5AQ29RF7 1337 aaKnown RBP18.26■□□□□ 0.51
VRK3-207ENST00000594092 C6orf229H3BNL8 230 aa18.26■□□□□ 0.51
VRK3-207ENST00000594092 FRAT2O75474 233 aaPredicted RBP18.26■□□□□ 0.51
VRK3-207ENST00000594092 POLD1P28340 1107 aa18.26■□□□□ 0.51
VRK3-207ENST00000594092 SLC9C2Q5TAH2 1124 aa18.26■□□□□ 0.51
VRK3-207ENST00000594092 ZNF804AQ7Z570 1209 aa18.26■□□□□ 0.51
VRK3-207ENST00000594092 MPNDQ8N594 471 aa18.26■□□□□ 0.51
VRK3-207ENST00000594092 WWC3Q9ULE0 1092 aa18.26■□□□□ 0.51
VRK3-207ENST00000594092 MAST3O60307 1309 aa18.25■□□□□ 0.51
VRK3-207ENST00000594092 KIF13BQ9NQT8 1826 aa18.25■□□□□ 0.51
VRK3-207ENST00000594092 PSDA5PKW4 1024 aaPredicted RBP18.25■□□□□ 0.51
VRK3-207ENST00000594092 PDE6AP16499 860 aa18.25■□□□□ 0.51
VRK3-207ENST00000594092 HSPA4P34932 840 aa18.25■□□□□ 0.51
VRK3-207ENST00000594092 MAP3K12Q12852 859 aa18.25■□□□□ 0.51
VRK3-207ENST00000594092 WASHC4Q2M389 1173 aa18.25■□□□□ 0.51
VRK3-207ENST00000594092 APPBP2Q92624 585 aa18.25■□□□□ 0.51
VRK3-207ENST00000594092 TMX4Q9H1E5 349 aaPredicted RBP18.25■□□□□ 0.51
VRK3-207ENST00000594092 DUOX1Q9NRD9 1551 aa18.24■□□□□ 0.51
VRK3-207ENST00000594092 DLEC1Q9Y238 1755 aa18.24■□□□□ 0.51
VRK3-207ENST00000594092 M0R2C6 588 aa18.24■□□□□ 0.51
VRK3-207ENST00000594092 UBE3CQ15386 1083 aa18.24■□□□□ 0.51
VRK3-207ENST00000594092 TDRD7Q8NHU6 1098 aaKnown RBP18.24■□□□□ 0.51
VRK3-207ENST00000594092 MAP4K1Q92918 833 aa18.24■□□□□ 0.51
VRK3-207ENST00000594092 PALD1Q9ULE6 856 aa18.24■□□□□ 0.51
VRK3-207ENST00000594092 MYH13Q9UKX3 1938 aa18.24■□□□□ 0.51
VRK3-207ENST00000594092 TCRBV5S4A2TA0A5A2 114 aa18.23■□□□□ 0.51
VRK3-207ENST00000594092 DPP8Q6V1X1 898 aaPredicted RBP18.23■□□□□ 0.51
VRK3-207ENST00000594092 ZNF532Q9HCE3 1301 aa18.23■□□□□ 0.51
VRK3-207ENST00000594092 C7orf43Q8WVR3 580 aa18.23■□□□□ 0.51
VRK3-207ENST00000594092 PUS7LQ9H0K6 701 aaKnown RBP18.23■□□□□ 0.51
VRK3-207ENST00000594092 LRP2BPQ9P2M1 347 aa18.23■□□□□ 0.51
VRK3-207ENST00000594092 RBM8AQ9Y5S9 174 aaKnown RBP18.23■□□□□ 0.51
VRK3-207ENST00000594092 A0A0G2JLW4 131 aa18.22■□□□□ 0.51
VRK3-207ENST00000594092 DPEP1P16444 411 aa18.22■□□□□ 0.51
VRK3-207ENST00000594092 KCNA3P22001 575 aa18.22■□□□□ 0.51
VRK3-207ENST00000594092 SLC4A3P48751 1232 aa18.22■□□□□ 0.51
VRK3-207ENST00000594092 ANAPC15P60006 121 aa18.22■□□□□ 0.51
VRK3-207ENST00000594092 CHAF1AQ13111 956 aaPredicted RBP18.22■□□□□ 0.51
VRK3-207ENST00000594092 MAGEB6Q8N7X4 407 aa18.22■□□□□ 0.51
VRK3-207ENST00000594092 IL17RAQ96F46 866 aa18.22■□□□□ 0.51
VRK3-207ENST00000594092 SGIP1Q9BQI5 828 aa18.22■□□□□ 0.51
VRK3-207ENST00000594092 CD209Q9NNX6 404 aa18.22■□□□□ 0.51
VRK3-207ENST00000594092 ABCF2Q9UG63 623 aa18.22■□□□□ 0.51
VRK3-207ENST00000594092 NECTIN1Q15223 517 aa18.21■□□□□ 0.51
VRK3-207ENST00000594092 ZNF219Q9P2Y4 722 aaPredicted RBP18.21■□□□□ 0.51
VRK3-207ENST00000594092 IL1R1P14778 569 aa18.21■□□□□ 0.51
VRK3-207ENST00000594092 RABEP1Q15276 862 aa18.21■□□□□ 0.51
VRK3-207ENST00000594092 TTLL6Q8N841 843 aa18.21■□□□□ 0.51
VRK3-207ENST00000594092 TBC1D2Q9BYX2 928 aa18.21■□□□□ 0.51
VRK3-207ENST00000594092 RIMBP2O15034 1052 aa18.2■□□□□ 0.5
VRK3-207ENST00000594092 VPS53Q5VIR6 699 aa18.2■□□□□ 0.5
VRK3-207ENST00000594092 HSCBQ8IWL3 235 aa18.2■□□□□ 0.5
VRK3-207ENST00000594092 RASEFQ8IZ41 740 aa18.2■□□□□ 0.5
VRK3-207ENST00000594092 KCNB2Q92953 911 aa18.2■□□□□ 0.5
VRK3-207ENST00000594092 GPAA1O43292 621 aa18.19■□□□□ 0.5
VRK3-207ENST00000594092 TGFB2P61812 414 aa18.19■□□□□ 0.5
VRK3-207ENST00000594092 DSCC1Q9BVC3 393 aa18.19■□□□□ 0.5
VRK3-207ENST00000594092 RAI14Q9P0K7 980 aa18.19■□□□□ 0.5
VRK3-207ENST00000594092 JAG2Q9Y219 1238 aa18.19■□□□□ 0.5
VRK3-207ENST00000594092 SNX14Q9Y5W7 946 aa18.19■□□□□ 0.5
VRK3-207ENST00000594092 SNED1Q8TER0 1413 aa18.19■□□□□ 0.5
VRK3-207ENST00000594092 KIAA1551Q9HCM1 1747 aa18.19■□□□□ 0.5
VRK3-207ENST00000594092 HSPD1P10809 573 aaKnown RBP18.19■□□□□ 0.5
VRK3-207ENST00000594092 CREB3L3Q68CJ9 461 aa18.19■□□□□ 0.5
VRK3-207ENST00000594092 CC2D2BQ6DHV5 1058 aa18.19■□□□□ 0.5
VRK3-207ENST00000594092 WDR66Q8TBY9 1149 aa18.19■□□□□ 0.5
VRK3-207ENST00000594092 SNX21Q969T3 373 aa18.19■□□□□ 0.5
VRK3-207ENST00000594092 ZC3H12CQ9C0D7 883 aaKnown RBP18.19■□□□□ 0.5
VRK3-207ENST00000594092 SALL1Q9NSC2 1324 aa18.18■□□□□ 0.5
VRK3-207ENST00000594092 PTGER2P43116 358 aa18.18■□□□□ 0.5
VRK3-207ENST00000594092 EYA3Q99504 573 aa18.18■□□□□ 0.5
VRK3-207ENST00000594092 RTFDC1Q9BY42 306 aaPredicted RBP18.18■□□□□ 0.5
VRK3-207ENST00000594092 COA1Q9GZY4 146 aa18.18■□□□□ 0.5
VRK3-207ENST00000594092 U3KPZ7 1027 aaPredicted RBP18.18■□□□□ 0.5
VRK3-207ENST00000594092 SLC27A2O14975 620 aa18.17■□□□□ 0.5
VRK3-207ENST00000594092 C21orf2O43822 256 aa18.17■□□□□ 0.5
VRK3-207ENST00000594092 ILDR2Q71H61 639 aa18.17■□□□□ 0.5
VRK3-207ENST00000594092 ZNF384Q8TF68 577 aa18.17■□□□□ 0.5
VRK3-207ENST00000594092 FOXP2O15409 715 aa18.16■□□□□ 0.5
VRK3-207ENST00000594092 CYP7A1P22680 504 aa18.16■□□□□ 0.5
VRK3-207ENST00000594092 PRDX5P30044 214 aa18.16■□□□□ 0.5
VRK3-207ENST00000594092 ZGPATQ8N5A5 531 aaKnown RBP18.16■□□□□ 0.5
VRK3-207ENST00000594092 SPTY2D1Q68D10 685 aaPredicted RBP18.16■□□□□ 0.5
VRK3-207ENST00000594092 AIDAQ96BJ3 306 aa18.16■□□□□ 0.5
VRK3-207ENST00000594092 NSUN4Q96CB9 384 aaKnown RBP18.16■□□□□ 0.5
VRK3-207ENST00000594092 MBD4O95243 580 aa18.15■□□□□ 0.5
VRK3-207ENST00000594092 CD2BP2O95400 341 aaKnown RBP18.15■□□□□ 0.5
VRK3-207ENST00000594092 MECOMQ03112 1051 aa18.15■□□□□ 0.5
VRK3-207ENST00000594092 RNF20Q5VTR2 975 aa18.15■□□□□ 0.5
VRK3-207ENST00000594092 NAA16Q6N069 864 aaPredicted RBP18.15■□□□□ 0.5
VRK3-207ENST00000594092 ADGRA1Q86SQ6 560 aa18.15■□□□□ 0.5
VRK3-207ENST00000594092 STRBPQ96SI9 672 aaKnown RBP18.15■□□□□ 0.5
VRK3-207ENST00000594092 CHD4Q14839 1912 aa18.14■□□□□ 0.5
VRK3-207ENST00000594092 ZKSCAN1P17029 563 aaPredicted RBP18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms