RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 FRAT2O75474 233 aaPredicted RBP24.14■■□□□ 1.45
LSM4-203ENST00000593829 RBM46Q8TBY0 533 aaKnown RBP24.14■■□□□ 1.45
LSM4-203ENST00000593829 NEUROD6Q96NK8 337 aa24.14■■□□□ 1.45
LSM4-203ENST00000593829 MXD3Q9BW11 206 aa24.14■■□□□ 1.45
LSM4-203ENST00000593829 GPR108Q9NPR9 543 aa24.14■■□□□ 1.45
LSM4-203ENST00000593829 FAM205AQ6ZU69 1335 aa24.13■■□□□ 1.45
LSM4-203ENST00000593829 ADORA1P30542 326 aa24.13■■□□□ 1.45
LSM4-203ENST00000593829 EAPPQ56P03 285 aaPredicted RBP24.13■■□□□ 1.45
LSM4-203ENST00000593829 IQSEC3Q9UPP2 1182 aaPredicted RBP24.13■■□□□ 1.45
LSM4-203ENST00000593829 AAMPQ13685 434 aa24.12■■□□□ 1.45
LSM4-203ENST00000593829 USP50Q70EL3 339 aaPredicted RBP24.12■■□□□ 1.45
LSM4-203ENST00000593829 XAGE2Q96GT9 111 aa24.12■■□□□ 1.45
LSM4-203ENST00000593829 GNL3LQ9NVN8 582 aaKnown RBP24.12■■□□□ 1.45
LSM4-203ENST00000593829 SHTN1A0MZ66 631 aa24.12■■□□□ 1.45
LSM4-203ENST00000593829 JAG2Q9Y219 1238 aa24.12■■□□□ 1.45
LSM4-203ENST00000593829 PCDHB15Q9Y5E8 787 aa24.12■■□□□ 1.45
LSM4-203ENST00000593829 USP17L8P0C7I0 530 aa24.11■■□□□ 1.45
LSM4-203ENST00000593829 FKBP1AP62942 108 aaKnown RBP24.11■■□□□ 1.45
LSM4-203ENST00000593829 TNNI3KQ59H18 835 aa24.11■■□□□ 1.45
LSM4-203ENST00000593829 FPGT-TNNI3KV9GXZ4 949 aa24.11■■□□□ 1.45
LSM4-203ENST00000593829 ZNF646O15015 1829 aaPredicted RBP24.1■■□□□ 1.45
LSM4-203ENST00000593829 LDHDQ86WU2 507 aa24.1■■□□□ 1.45
LSM4-203ENST00000593829 ARAP2Q8WZ64 1704 aa24.1■■□□□ 1.45
LSM4-203ENST00000593829 POTEIP0CG38 1075 aa24.1■■□□□ 1.45
LSM4-203ENST00000593829 POTEJP0CG39 1038 aa24.1■■□□□ 1.45
LSM4-203ENST00000593829 PHKA1P46020 1223 aa24.1■■□□□ 1.45
LSM4-203ENST00000593829 CCDC102BQ68D86 513 aa24.1■■□□□ 1.45
LSM4-203ENST00000593829 RAB11FIP3O75154 756 aa24.09■■□□□ 1.45
LSM4-203ENST00000593829 ZNF280AP59817 542 aaPredicted RBP24.09■■□□□ 1.45
LSM4-203ENST00000593829 CHAF1AQ13111 956 aaPredicted RBP24.09■■□□□ 1.45
LSM4-203ENST00000593829 GORABQ5T7V8 394 aa24.09■■□□□ 1.45
LSM4-203ENST00000593829 OGFOD1Q8N543 542 aa24.09■■□□□ 1.45
LSM4-203ENST00000593829 CERS5Q8N5B7 392 aa24.09■■□□□ 1.45
LSM4-203ENST00000593829 SMC1BQ8NDV3 1235 aa24.09■■□□□ 1.45
LSM4-203ENST00000593829 ZBTB47Q9UFB7 747 aaPredicted RBP24.09■■□□□ 1.45
LSM4-203ENST00000593829 CLEC11AQ9Y240 323 aa24.09■■□□□ 1.45
LSM4-203ENST00000593829 MMP14P50281 582 aa24.08■■□□□ 1.45
LSM4-203ENST00000593829 MFSD14BQ5SR56 506 aa24.08■■□□□ 1.45
LSM4-203ENST00000593829 SAMD7Q7Z3H4 446 aa24.08■■□□□ 1.45
LSM4-203ENST00000593829 RHPN1Q8TCX5 695 aa24.08■■□□□ 1.45
LSM4-203ENST00000593829 APBB1O00213 710 aa24.08■■□□□ 1.44
LSM4-203ENST00000593829 C1QTNF8P60827 252 aa24.08■■□□□ 1.44
LSM4-203ENST00000593829 KIAA0825Q8IV33 1275 aa24.08■■□□□ 1.44
LSM4-203ENST00000593829 EXOC6Q8TAG9 804 aa24.08■■□□□ 1.44
LSM4-203ENST00000593829 KIF1BPQ96EK5 621 aa24.08■■□□□ 1.44
LSM4-203ENST00000593829 SEMA3EO15041 775 aa24.07■■□□□ 1.44
LSM4-203ENST00000593829 CHADLQ6NUI6 762 aa24.07■■□□□ 1.44
LSM4-203ENST00000593829 TRPM4Q8TD43 1214 aa24.07■■□□□ 1.44
LSM4-203ENST00000593829 TBC1D22AQ8WUA7 517 aa24.07■■□□□ 1.44
LSM4-203ENST00000593829 FSTL1Q12841 308 aa24.06■■□□□ 1.44
LSM4-203ENST00000593829 TBC1D10BQ4KMP7 808 aaPredicted RBP24.06■■□□□ 1.44
LSM4-203ENST00000593829 RBM26Q5T8P6 1007 aaKnown RBP24.06■■□□□ 1.44
LSM4-203ENST00000593829 HDAC9Q9UKV0 1011 aa24.06■■□□□ 1.44
LSM4-203ENST00000593829 DENND2AQ9ULE3 1009 aa24.06■■□□□ 1.44
LSM4-203ENST00000593829 ZBTB22O15209 634 aa24.06■■□□□ 1.44
LSM4-203ENST00000593829 EAF2Q96CJ1 260 aaPredicted RBP24.06■■□□□ 1.44
LSM4-203ENST00000593829 HIRAP54198 1017 aaPredicted RBP24.05■■□□□ 1.44
LSM4-203ENST00000593829 KIF4BQ2VIQ3 1234 aa24.05■■□□□ 1.44
LSM4-203ENST00000593829 WDR66Q8TBY9 1149 aa24.05■■□□□ 1.44
LSM4-203ENST00000593829 DCTPP1Q9H773 170 aa24.05■■□□□ 1.44
LSM4-203ENST00000593829 MYOZ2Q9NPC6 264 aa24.05■■□□□ 1.44
LSM4-203ENST00000593829 ADAMTSL1Q8N6G6 1762 aa24.05■■□□□ 1.44
LSM4-203ENST00000593829 EGFRP00533 1210 aa24.04■■□□□ 1.44
LSM4-203ENST00000593829 DBNDD2Q9BQY9 259 aa24.04■■□□□ 1.44
LSM4-203ENST00000593829 IL1RAPL2Q9NP60 686 aa24.04■■□□□ 1.44
LSM4-203ENST00000593829 CLASRPQ8N2M8 674 aaKnown RBP24.04■■□□□ 1.44
LSM4-203ENST00000593829 ZC3H15Q8WU90 426 aaKnown RBP24.04■■□□□ 1.44
LSM4-203ENST00000593829 CCDC8Q9H0W5 538 aaPredicted RBP24.04■■□□□ 1.44
LSM4-203ENST00000593829 F8W031 263 aaPredicted RBP24.03■■□□□ 1.44
LSM4-203ENST00000593829 CCDC158Q5M9N0 1113 aa24.03■■□□□ 1.44
LSM4-203ENST00000593829 AACSQ86V21 672 aa24.03■■□□□ 1.44
LSM4-203ENST00000593829 COL1A1P02452 1464 aaPredicted RBP24.02■■□□□ 1.44
LSM4-203ENST00000593829 RASGRF1Q13972 1273 aa24.02■■□□□ 1.44
LSM4-203ENST00000593829 DBNLQ9UJU6 430 aaKnown RBP24.02■■□□□ 1.44
LSM4-203ENST00000593829 UQCRFS1P1P0C7P4 283 aa24.02■■□□□ 1.44
LSM4-203ENST00000593829 LRRCC1Q9C099 1032 aa24.02■■□□□ 1.44
LSM4-203ENST00000593829 ARID4AP29374 1257 aaPredicted RBP24.01■■□□□ 1.43
LSM4-203ENST00000593829 TTC39AQ5SRH9 613 aa24.01■■□□□ 1.43
LSM4-203ENST00000593829 MAP1SQ66K74 1059 aaPredicted RBP24.01■■□□□ 1.43
LSM4-203ENST00000593829 PGAP2Q9UHJ9 254 aa24.01■■□□□ 1.43
LSM4-203ENST00000593829 TTF2Q9UNY4 1162 aaKnown RBP24.01■■□□□ 1.43
LSM4-203ENST00000593829 SUGT1Q9Y2Z0 365 aa24.01■■□□□ 1.43
LSM4-203ENST00000593829 PDS5AQ29RF7 1337 aaKnown RBP24.01■■□□□ 1.43
LSM4-203ENST00000593829 MYH13Q9UKX3 1938 aa24.01■■□□□ 1.43
LSM4-203ENST00000593829 TLR7Q9NYK1 1049 aaKnown RBP24■■□□□ 1.43
LSM4-203ENST00000593829 HDAC1Q13547 482 aaPredicted RBP23.99■■□□□ 1.43
LSM4-203ENST00000593829 CNTROBQ8N137 903 aa23.99■■□□□ 1.43
LSM4-203ENST00000593829 IFIT2P09913 472 aaKnown RBP23.98■■□□□ 1.43
LSM4-203ENST00000593829 SCARF1Q14162 830 aa23.98■■□□□ 1.43
LSM4-203ENST00000593829 GRIK5Q16478 980 aa23.98■■□□□ 1.43
LSM4-203ENST00000593829 SALL1Q9NSC2 1324 aa23.98■■□□□ 1.43
LSM4-203ENST00000593829 HMG20BQ9P0W2 317 aa23.98■■□□□ 1.43
LSM4-203ENST00000593829 DLGAP5Q15398 846 aa23.98■■□□□ 1.43
LSM4-203ENST00000593829 ZGPATQ8N5A5 531 aaKnown RBP23.98■■□□□ 1.43
LSM4-203ENST00000593829 SPATA5Q8NB90 893 aa23.98■■□□□ 1.43
LSM4-203ENST00000593829 ZNF512BQ96KM6 892 aaPredicted RBP23.98■■□□□ 1.43
LSM4-203ENST00000593829 MCAMP43121 646 aa23.97■■□□□ 1.43
LSM4-203ENST00000593829 NBR1Q14596 966 aa23.97■■□□□ 1.43
LSM4-203ENST00000593829 MTMR14Q8NCE2 650 aa23.97■■□□□ 1.43
LSM4-203ENST00000593829 SERPINA10Q9UK55 444 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms