RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 LPIN2Q92539 896 aa24.96■■□□□ 1.59
COPE-204ENST00000593827 MTX1Q13505 466 aa24.95■■□□□ 1.58
COPE-204ENST00000593827 FBXO33Q7Z6M2 555 aa24.95■■□□□ 1.58
COPE-204ENST00000593827 HHIPL1Q96JK4 782 aa24.95■■□□□ 1.58
COPE-204ENST00000593827 COPRSQ9NQ92 184 aa24.95■■□□□ 1.58
COPE-204ENST00000593827 SRGAP3O43295 1099 aa24.94■■□□□ 1.58
COPE-204ENST00000593827 FMR1Q06787 632 aaKnown RBP eCLIP24.94■■□□□ 1.586e-7■■■□□ 15.8
COPE-204ENST00000593827 DLGAP5Q15398 846 aa24.94■■□□□ 1.58
COPE-204ENST00000593827 PAXIP1Q6ZW49 1069 aaPredicted RBP24.94■■□□□ 1.58
COPE-204ENST00000593827 TMEM57Q8N5G2 664 aa24.94■■□□□ 1.58
COPE-204ENST00000593827 C2orf69Q8N8R5 385 aa24.94■■□□□ 1.58
COPE-204ENST00000593827 TBC1D22AQ8WUA7 517 aa24.94■■□□□ 1.58
COPE-204ENST00000593827 SIL1Q9H173 461 aa24.94■■□□□ 1.58
COPE-204ENST00000593827 MYO1BO43795 1136 aa24.93■■□□□ 1.58
COPE-204ENST00000593827 VEGFBP49765 207 aa24.93■■□□□ 1.58
COPE-204ENST00000593827 WNT10BO00744 389 aa24.92■■□□□ 1.58
COPE-204ENST00000593827 FGFR2P21802 821 aa24.92■■□□□ 1.58
COPE-204ENST00000593827 MFSD14BQ5SR56 506 aa24.92■■□□□ 1.58
COPE-204ENST00000593827 ATG9AQ7Z3C6 839 aa24.92■■□□□ 1.58
COPE-204ENST00000593827 SAPCD2Q86UD0 394 aa24.92■■□□□ 1.58
COPE-204ENST00000593827 ADM5C9JUS6 153 aa24.91■■□□□ 1.58
COPE-204ENST00000593827 NBPF9Q3BBW0 867 aa24.91■■□□□ 1.58
COPE-204ENST00000593827 APOBEC3FQ8IUX4 373 aaKnown RBP24.91■■□□□ 1.58
COPE-204ENST00000593827 ITPRIPQ8IWB1 547 aa24.91■■□□□ 1.58
COPE-204ENST00000593827 MTMR14Q8NCE2 650 aa24.91■■□□□ 1.58
COPE-204ENST00000593827 GNL3LQ9NVN8 582 aaKnown RBP24.91■■□□□ 1.58
COPE-204ENST00000593827 WDR33Q9C0J8 1336 aaKnown RBP24.9■■□□□ 1.58
COPE-204ENST00000593827 ATP2B3Q16720 1220 aa24.9■■□□□ 1.58
COPE-204ENST00000593827 CERS5Q8N5B7 392 aa24.9■■□□□ 1.58
COPE-204ENST00000593827 GBA2Q9HCG7 927 aaPredicted RBP24.9■■□□□ 1.58
COPE-204ENST00000593827 AKAP2Q9Y2D5 859 aa24.9■■□□□ 1.58
COPE-204ENST00000593827 A0A1B0GUL6 1792 aa24.9■■□□□ 1.58
COPE-204ENST00000593827 NF2P35240 595 aa24.89■■□□□ 1.58
COPE-204ENST00000593827 CAPNS2Q96L46 248 aa24.89■■□□□ 1.58
COPE-204ENST00000593827 TNNQ9UQP3 1299 aa24.89■■□□□ 1.58
COPE-204ENST00000593827 ASTN2O75129 1339 aaPredicted RBP24.88■■□□□ 1.57
COPE-204ENST00000593827 F8W031 263 aaPredicted RBP24.88■■□□□ 1.57
COPE-204ENST00000593827 BCAMP50895 628 aa24.88■■□□□ 1.57
COPE-204ENST00000593827 RBM5P52756 815 aaKnown RBP eCLIP24.88■■□□□ 1.571e-13■■□□□ 14
COPE-204ENST00000593827 FKBP1BP68106 108 aa24.88■■□□□ 1.57
COPE-204ENST00000593827 MAP2K1Q02750 393 aaPredicted RBP24.88■■□□□ 1.57
COPE-204ENST00000593827 AIDAQ96BJ3 306 aa24.88■■□□□ 1.57
COPE-204ENST00000593827 CDCA5Q96FF9 252 aa24.88■■□□□ 1.57
COPE-204ENST00000593827 PA2G4Q9UQ80 394 aaKnown RBP24.88■■□□□ 1.57
COPE-204ENST00000593827 JAG2Q9Y219 1238 aa24.88■■□□□ 1.57
COPE-204ENST00000593827 SUGT1Q9Y2Z0 365 aa24.88■■□□□ 1.57
COPE-204ENST00000593827 HUNKP57058 714 aa24.87■■□□□ 1.57
COPE-204ENST00000593827 CHAF1AQ13111 956 aaPredicted RBP24.87■■□□□ 1.57
COPE-204ENST00000593827 ZBED3Q96IU2 234 aaPredicted RBP24.87■■□□□ 1.57
COPE-204ENST00000593827 SERPINA10Q9UK55 444 aa24.87■■□□□ 1.57
COPE-204ENST00000593827 TRPM7Q96QT4 1865 aa24.87■■□□□ 1.57
COPE-204ENST00000593827 HSPA1AP0DMV8 641 aaKnown RBP24.86■■□□□ 1.57
COPE-204ENST00000593827 HSPA1BP0DMV9 641 aaKnown RBP24.86■■□□□ 1.57
COPE-204ENST00000593827 CFAP100Q494V2 611 aa24.86■■□□□ 1.57
COPE-204ENST00000593827 COL13A1Q5TAT6 717 aaPredicted RBP24.86■■□□□ 1.57
COPE-204ENST00000593827 WDR66Q8TBY9 1149 aa24.86■■□□□ 1.57
COPE-204ENST00000593827 TTF2Q9UNY4 1162 aaKnown RBP24.86■■□□□ 1.57
COPE-204ENST00000593827 MAST3O60307 1309 aa24.86■■□□□ 1.57
COPE-204ENST00000593827 MAP2K2P36507 400 aa24.85■■□□□ 1.57
COPE-204ENST00000593827 G3BP1Q13283 466 aaKnown RBP eCLIP24.85■■□□□ 1.576e-7■□□□□ 10.5
COPE-204ENST00000593827 CHMP4BQ9H444 224 aaKnown RBP24.85■■□□□ 1.57
COPE-204ENST00000593827 RCAN3Q9UKA8 241 aa24.85■■□□□ 1.57
COPE-204ENST00000593827 IQSEC3Q9UPP2 1182 aaPredicted RBP24.85■■□□□ 1.57
COPE-204ENST00000593827 SPDYE2BA6NHP3 402 aa24.84■■□□□ 1.57
COPE-204ENST00000593827 SEMA3EO15041 775 aa24.84■■□□□ 1.57
COPE-204ENST00000593827 SPDYE6P0CI01 402 aa24.84■■□□□ 1.57
COPE-204ENST00000593827 HDLBPQ00341 1268 aaKnown RBP24.84■■□□□ 1.57
COPE-204ENST00000593827 GRM1Q13255 1194 aa24.84■■□□□ 1.57
COPE-204ENST00000593827 CYP4F22Q6NT55 531 aa24.84■■□□□ 1.57
COPE-204ENST00000593827 BEGAINQ9BUH8 593 aa24.84■■□□□ 1.57
COPE-204ENST00000593827 PPP2R3BQ9Y5P8 575 aa24.84■■□□□ 1.57
COPE-204ENST00000593827 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.83■■□□□ 1.57
COPE-204ENST00000593827 CCDC102AQ96A19 550 aa24.83■■□□□ 1.57
COPE-204ENST00000593827 PCNTO95613 3336 aa24.83■■□□□ 1.57
COPE-204ENST00000593827 COL1A1P02452 1464 aaPredicted RBP24.83■■□□□ 1.56
COPE-204ENST00000593827 ZBTB7BO15156 539 aaPredicted RBP24.82■■□□□ 1.56
COPE-204ENST00000593827 TNFAIP1Q13829 316 aa24.82■■□□□ 1.56
COPE-204ENST00000593827 RLBP1P12271 317 aa24.81■■□□□ 1.56
COPE-204ENST00000593827 ATP8B2P98198 1209 aa24.81■■□□□ 1.56
COPE-204ENST00000593827 NOGQ13253 232 aa24.81■■□□□ 1.56
COPE-204ENST00000593827 MVPQ14764 893 aaKnown RBP24.81■■□□□ 1.56
COPE-204ENST00000593827 RGMBQ6NW40 437 aa24.81■■□□□ 1.56
COPE-204ENST00000593827 DLK2Q6UY11 383 aa24.81■■□□□ 1.56
COPE-204ENST00000593827 MRIQ9BWK5 157 aa24.81■■□□□ 1.56
COPE-204ENST00000593827 DENND2AQ9ULE3 1009 aa24.81■■□□□ 1.56
COPE-204ENST00000593827 ZBTB22O15209 634 aa24.8■■□□□ 1.56
COPE-204ENST00000593827 TEKT1Q969V4 418 aa24.8■■□□□ 1.56
COPE-204ENST00000593827 ZNF646O15015 1829 aaPredicted RBP24.79■■□□□ 1.56
COPE-204ENST00000593827 PNMA6EA0A0J9YXQ4 647 aa24.79■■□□□ 1.56
COPE-204ENST00000593827 TFCP2Q12800 502 aa24.79■■□□□ 1.56
COPE-204ENST00000593827 OS9Q13438 667 aaPredicted RBP24.79■■□□□ 1.56
COPE-204ENST00000593827 TTLL12Q14166 644 aaPredicted RBP24.79■■□□□ 1.56
COPE-204ENST00000593827 ZGPATQ8N5A5 531 aaKnown RBP24.79■■□□□ 1.56
COPE-204ENST00000593827 DEFB129Q9H1M3 183 aa24.79■■□□□ 1.56
COPE-204ENST00000593827 WBP1LQ9NX94 342 aa24.79■■□□□ 1.56
COPE-204ENST00000593827 CRKP46108 304 aa24.78■■□□□ 1.56
COPE-204ENST00000593827 ZNF157P51786 506 aaPredicted RBP24.78■■□□□ 1.56
COPE-204ENST00000593827 POLA2Q14181 598 aa24.78■■□□□ 1.56
COPE-204ENST00000593827 SUPT20HL1Q3ZLR7 823 aa24.78■■□□□ 1.56
COPE-204ENST00000593827 GORABQ5T7V8 394 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms