RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 MPHOSPH8Q99549 860 aa16.72■□□□□ 0.27
H3F3B-213ENST00000593254 LEMD3Q9Y2U8 911 aa16.72■□□□□ 0.27
H3F3B-213ENST00000593254 ANKRD18BA2A2Z9 1011 aa16.71■□□□□ 0.27
H3F3B-213ENST00000593254 SLC4A10Q6U841 1118 aa16.71■□□□□ 0.27
H3F3B-213ENST00000593254 MRPL50Q8N5N7 158 aaKnown RBP16.71■□□□□ 0.27
H3F3B-213ENST00000593254 SRCIN1Q9C0H9 1055 aa16.71■□□□□ 0.27
H3F3B-213ENST00000593254 ANKRD2Q9GZV1 360 aa16.71■□□□□ 0.27
H3F3B-213ENST00000593254 LAMB1P07942 1786 aa16.71■□□□□ 0.27
H3F3B-213ENST00000593254 WNT10BO00744 389 aa16.7■□□□□ 0.26
H3F3B-213ENST00000593254 PTPN12Q05209 780 aaKnown RBP16.7■□□□□ 0.26
H3F3B-213ENST00000593254 MKRN3Q13064 507 aaKnown RBP16.7■□□□□ 0.26
H3F3B-213ENST00000593254 IFIT5Q13325 482 aaKnown RBP16.7■□□□□ 0.26
H3F3B-213ENST00000593254 TTLL12Q14166 644 aaPredicted RBP16.7■□□□□ 0.26
H3F3B-213ENST00000593254 EPHA10Q5JZY3 1008 aa16.7■□□□□ 0.26
H3F3B-213ENST00000593254 CDCA7LQ96GN5 454 aa16.7■□□□□ 0.26
H3F3B-213ENST00000593254 C9orf78Q9NZ63 289 aaPredicted RBP16.7■□□□□ 0.26
H3F3B-213ENST00000593254 ZNF804BA4D1E1 1349 aa16.7■□□□□ 0.26
H3F3B-213ENST00000593254 PTPRCP08575 1304 aa16.7■□□□□ 0.26
H3F3B-213ENST00000593254 CHRNDQ07001 517 aa16.69■□□□□ 0.26
H3F3B-213ENST00000593254 DACT2Q5SW24 774 aa16.69■□□□□ 0.26
H3F3B-213ENST00000593254 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
H3F3B-213ENST00000593254 TXNRD3Q86VQ6 643 aa16.69■□□□□ 0.26
H3F3B-213ENST00000593254 TRMT2AQ8IZ69 625 aaKnown RBP16.69■□□□□ 0.26
H3F3B-213ENST00000593254 SSH1Q8WYL5 1049 aa16.69■□□□□ 0.26
H3F3B-213ENST00000593254 COA1Q9GZY4 146 aa16.69■□□□□ 0.26
H3F3B-213ENST00000593254 RANBP2P49792 3224 aaKnown RBP16.69■□□□□ 0.26
H3F3B-213ENST00000593254 POTEFA5A3E0 1075 aa16.68■□□□□ 0.26
H3F3B-213ENST00000593254 NF2P35240 595 aa16.68■□□□□ 0.26
H3F3B-213ENST00000593254 LDLRAD1Q5T700 205 aa16.68■□□□□ 0.26
H3F3B-213ENST00000593254 SPRYD7Q5W111 196 aa16.68■□□□□ 0.26
H3F3B-213ENST00000593254 CHMP3Q9Y3E7 222 aa16.68■□□□□ 0.26
H3F3B-213ENST00000593254 UTYO14607 1347 aa16.68■□□□□ 0.26
H3F3B-213ENST00000593254 ALDH1A1P00352 501 aa16.67■□□□□ 0.26
H3F3B-213ENST00000593254 KLRK1P26718 216 aa16.67■□□□□ 0.26
H3F3B-213ENST00000593254 INTS3Q68E01 1043 aaKnown RBP16.67■□□□□ 0.26
H3F3B-213ENST00000593254 OTOP1Q7RTM1 612 aa16.67■□□□□ 0.26
H3F3B-213ENST00000593254 ARMC9Q7Z3E5 817 aa16.67■□□□□ 0.26
H3F3B-213ENST00000593254 MXD3Q9BW11 206 aa16.67■□□□□ 0.26
H3F3B-213ENST00000593254 NBPF7P0C2Y1 421 aaPredicted RBP16.66■□□□□ 0.26
H3F3B-213ENST00000593254 MMP14P50281 582 aa16.66■□□□□ 0.26
H3F3B-213ENST00000593254 CCDC57Q2TAC2 916 aa16.66■□□□□ 0.26
H3F3B-213ENST00000593254 ALDH1L2Q3SY69 923 aa16.66■□□□□ 0.26
H3F3B-213ENST00000593254 STRIP1Q5VSL9 837 aa16.66■□□□□ 0.26
H3F3B-213ENST00000593254 OGFOD1Q8N543 542 aa16.66■□□□□ 0.26
H3F3B-213ENST00000593254 KAZALD1Q96I82 304 aa16.66■□□□□ 0.26
H3F3B-213ENST00000593254 SUCLG2Q96I99 432 aa16.66■□□□□ 0.26
H3F3B-213ENST00000593254 TRIOBPQ9H2D6 2365 aa16.66■□□□□ 0.26
H3F3B-213ENST00000593254 MYO3BQ8WXR4 1341 aa16.66■□□□□ 0.26
H3F3B-213ENST00000593254 IRS2Q9Y4H2 1338 aa16.66■□□□□ 0.26
H3F3B-213ENST00000593254 KCNJ4P48050 445 aa16.65■□□□□ 0.26
H3F3B-213ENST00000593254 C15orf52Q6ZUT6 534 aaKnown RBP16.65■□□□□ 0.26
H3F3B-213ENST00000593254 ZBED3Q96IU2 234 aaPredicted RBP16.65■□□□□ 0.26
H3F3B-213ENST00000593254 ZNF594Q96JF6 807 aaPredicted RBP16.65■□□□□ 0.26
H3F3B-213ENST00000593254 TRIM17Q9Y577 477 aa16.65■□□□□ 0.26
H3F3B-213ENST00000593254 MANSC4A6NHS7 340 aaPredicted RBP16.64■□□□□ 0.25
H3F3B-213ENST00000593254 SNAP23O00161 211 aa16.64■□□□□ 0.25
H3F3B-213ENST00000593254 TAF5LO75529 589 aa16.64■□□□□ 0.25
H3F3B-213ENST00000593254 SASH1O94885 1247 aa16.64■□□□□ 0.25
H3F3B-213ENST00000593254 CT47B1P0C2W7 299 aaPredicted RBP16.64■□□□□ 0.25
H3F3B-213ENST00000593254 FXR1P51114 621 aaKnown RBP eCLIP16.64■□□□□ 0.25
H3F3B-213ENST00000593254 INHBEP58166 350 aa16.64■□□□□ 0.25
H3F3B-213ENST00000593254 LDHAL6AQ6ZMR3 332 aa16.64■□□□□ 0.25
H3F3B-213ENST00000593254 IFNL1Q8IU54 200 aa16.64■□□□□ 0.25
H3F3B-213ENST00000593254 APOBEC3FQ8IUX4 373 aaKnown RBP16.64■□□□□ 0.25
H3F3B-213ENST00000593254 HELBQ8NG08 1087 aaPredicted RBP16.64■□□□□ 0.25
H3F3B-213ENST00000593254 COL1A1P02452 1464 aaPredicted RBP16.63■□□□□ 0.25
H3F3B-213ENST00000593254 PRKG1Q13976 671 aa16.63■□□□□ 0.25
H3F3B-213ENST00000593254 MAP3K11Q16584 847 aa16.63■□□□□ 0.25
H3F3B-213ENST00000593254 RABL6Q3YEC7 729 aaPredicted RBP16.63■□□□□ 0.25
H3F3B-213ENST00000593254 TAF7LQ5H9L4 462 aa16.63■□□□□ 0.25
H3F3B-213ENST00000593254 CD209Q9NNX6 404 aa16.63■□□□□ 0.25
H3F3B-213ENST00000593254 SMC4Q9NTJ3 1288 aa16.63■□□□□ 0.25
H3F3B-213ENST00000593254 IGF2BP3O00425 579 aaKnown RBP eCLIP16.62■□□□□ 0.25
H3F3B-213ENST00000593254 ZBTB48P10074 688 aaPredicted RBP16.62■□□□□ 0.25
H3F3B-213ENST00000593254 TTLL5Q6EMB2 1281 aa16.62■□□□□ 0.25
H3F3B-213ENST00000593254 FBXW7Q969H0 707 aa16.62■□□□□ 0.25
H3F3B-213ENST00000593254 ARMC5Q96C12 935 aa16.62■□□□□ 0.25
H3F3B-213ENST00000593254 BICC1Q9H694 974 aaKnown RBP16.62■□□□□ 0.25
H3F3B-213ENST00000593254 CNNM1Q9NRU3 951 aa16.62■□□□□ 0.25
H3F3B-213ENST00000593254 ANGEL1Q9UNK9 670 aaKnown RBP16.62■□□□□ 0.25
H3F3B-213ENST00000593254 FZD1Q9UP38 647 aa16.62■□□□□ 0.25
H3F3B-213ENST00000593254 PTPN22Q9Y2R2 807 aa16.62■□□□□ 0.25
H3F3B-213ENST00000593254 ECM29Q5VYK3 1845 aa16.61■□□□□ 0.25
H3F3B-213ENST00000593254 SSC5DA1L4H1 1573 aa16.61■□□□□ 0.25
H3F3B-213ENST00000593254 ANKRD44Q8N8A2 993 aa16.61■□□□□ 0.25
H3F3B-213ENST00000593254 USP44Q9H0E7 712 aa16.61■□□□□ 0.25
H3F3B-213ENST00000593254 A0A0C4DFX4 3053 aa16.6■□□□□ 0.25
H3F3B-213ENST00000593254 GTF2IP78347 998 aa16.6■□□□□ 0.25
H3F3B-213ENST00000593254 SLC10A4Q96EP9 437 aa16.6■□□□□ 0.25
H3F3B-213ENST00000593254 DEFB129Q9H1M3 183 aa16.6■□□□□ 0.25
H3F3B-213ENST00000593254 UNCXA6NJT0 531 aa16.59■□□□□ 0.25
H3F3B-213ENST00000593254 IL1R1P14778 569 aa16.59■□□□□ 0.25
H3F3B-213ENST00000593254 EN2P19622 333 aaPredicted RBP16.59■□□□□ 0.25
H3F3B-213ENST00000593254 ZNF804AQ7Z570 1209 aa16.59■□□□□ 0.25
H3F3B-213ENST00000593254 KIAA0825Q8IV33 1275 aa16.59■□□□□ 0.25
H3F3B-213ENST00000593254 ERO1AQ96HE7 468 aa16.59■□□□□ 0.25
H3F3B-213ENST00000593254 WNK4Q96J92 1243 aa16.59■□□□□ 0.25
H3F3B-213ENST00000593254 CLMNQ96JQ2 1002 aa16.59■□□□□ 0.25
H3F3B-213ENST00000593254 PUS3Q9BZE2 481 aaKnown RBP16.59■□□□□ 0.25
H3F3B-213ENST00000593254 PLIN1O60240 522 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms