RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 METTL24Q5JXM2 366 aa16.43■□□□□ 0.22
PRKCSH-218ENST00000593053 API5Q9BZZ5 524 aaKnown RBP16.43■□□□□ 0.22
PRKCSH-218ENST00000593053 TSKSQ9UJT2 592 aa16.43■□□□□ 0.22
PRKCSH-218ENST00000593053 FAM155AB1AL88 458 aaPredicted RBP16.42■□□□□ 0.22
PRKCSH-218ENST00000593053 HIBADHP31937 336 aaKnown RBP16.42■□□□□ 0.22
PRKCSH-218ENST00000593053 RARSP54136 660 aaKnown RBP16.42■□□□□ 0.22
PRKCSH-218ENST00000593053 DLGAP5Q15398 846 aa16.42■□□□□ 0.22
PRKCSH-218ENST00000593053 MIER1Q8N108 512 aa16.42■□□□□ 0.22
PRKCSH-218ENST00000593053 CCDC102AQ96A19 550 aa16.42■□□□□ 0.22
PRKCSH-218ENST00000593053 ZBED3Q96IU2 234 aaPredicted RBP16.42■□□□□ 0.22
PRKCSH-218ENST00000593053 FAM84BQ96KN1 310 aaPredicted RBP16.42■□□□□ 0.22
PRKCSH-218ENST00000593053 ZNF646O15015 1829 aaPredicted RBP16.42■□□□□ 0.22
PRKCSH-218ENST00000593053 UBTFL1P0CB47 393 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-218ENST00000593053 FKBP1AP62942 108 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-218ENST00000593053 FKBP1BP68106 108 aa16.41■□□□□ 0.22
PRKCSH-218ENST00000593053 MOB2Q70IA6 237 aa16.41■□□□□ 0.22
PRKCSH-218ENST00000593053 TDRD7Q8NHU6 1098 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-218ENST00000593053 FAM205AQ6ZU69 1335 aa16.41■□□□□ 0.22
PRKCSH-218ENST00000593053 CA12O43570 354 aa16.4■□□□□ 0.22
PRKCSH-218ENST00000593053 PDE8BO95263 885 aa16.4■□□□□ 0.22
PRKCSH-218ENST00000593053 DIEXFQ68CQ4 756 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-218ENST00000593053 APOBEC3FQ8IUX4 373 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-218ENST00000593053 VGLL2Q8N8G2 317 aa16.4■□□□□ 0.22
PRKCSH-218ENST00000593053 PCDHAC2Q9Y5I4 1007 aa16.4■□□□□ 0.22
PRKCSH-218ENST00000593053 A0A1B0GUL6 1792 aa16.4■□□□□ 0.22
PRKCSH-218ENST00000593053 POLR2AP24928 1970 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-218ENST00000593053 UBE2Q2LH0YL09 131 aa16.39■□□□□ 0.21
PRKCSH-218ENST00000593053 SLC10A3P09131 477 aa16.39■□□□□ 0.21
PRKCSH-218ENST00000593053 NF2P35240 595 aa16.39■□□□□ 0.21
PRKCSH-218ENST00000593053 RFX5P48382 616 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-218ENST00000593053 KIF23Q02241 960 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-218ENST00000593053 TTLL12Q14166 644 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-218ENST00000593053 CFAP100Q494V2 611 aa16.39■□□□□ 0.21
PRKCSH-218ENST00000593053 MFSD14BQ5SR56 506 aa16.39■□□□□ 0.21
PRKCSH-218ENST00000593053 VPS37DQ86XT2 251 aa16.39■□□□□ 0.21
PRKCSH-218ENST00000593053 MTMR14Q8NCE2 650 aa16.39■□□□□ 0.21
PRKCSH-218ENST00000593053 KIF16BQ96L93 1317 aa16.39■□□□□ 0.21
PRKCSH-218ENST00000593053 RBM5P52756 815 aaKnown RBP eCLIP16.38■□□□□ 0.21
PRKCSH-218ENST00000593053 CAVIN4Q5BKX8 364 aa16.38■□□□□ 0.21
PRKCSH-218ENST00000593053 FBXO33Q7Z6M2 555 aa16.38■□□□□ 0.21
PRKCSH-218ENST00000593053 IQSEC3Q9UPP2 1182 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-218ENST00000593053 CLRN2A0PK11 232 aa16.37■□□□□ 0.21
PRKCSH-218ENST00000593053 SPDYE2BA6NHP3 402 aa16.37■□□□□ 0.21
PRKCSH-218ENST00000593053 EYA2O00167 538 aa16.37■□□□□ 0.21
PRKCSH-218ENST00000593053 MYO1BO43795 1136 aa16.37■□□□□ 0.21
PRKCSH-218ENST00000593053 SPDYE6P0CI01 402 aa16.37■□□□□ 0.21
PRKCSH-218ENST00000593053 PTPN12Q05209 780 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-218ENST00000593053 PUM3Q15397 648 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-218ENST00000593053 RASAL3Q86YV0 1011 aa16.37■□□□□ 0.21
PRKCSH-218ENST00000593053 PRMT6Q96LA8 375 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-218ENST00000593053 DEFB129Q9H1M3 183 aa16.37■□□□□ 0.21
PRKCSH-218ENST00000593053 TTF2Q9UNY4 1162 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-218ENST00000593053 LRRFIP2Q9Y608 721 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-218ENST00000593053 PAPPA2Q9BXP8 1791 aa16.36■□□□□ 0.21
PRKCSH-218ENST00000593053 FRAT2O75474 233 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-218ENST00000593053 IFIT1P09914 478 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-218ENST00000593053 BCAMP50895 628 aa16.36■□□□□ 0.21
PRKCSH-218ENST00000593053 HNRNPUQ00839 825 aaKnown RBP eCLIP16.36■□□□□ 0.21
PRKCSH-218ENST00000593053 CHAF1AQ13111 956 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-218ENST00000593053 PRKG1Q13976 671 aa16.36■□□□□ 0.21
PRKCSH-218ENST00000593053 ARHGAP45Q92619 1136 aa16.36■□□□□ 0.21
PRKCSH-218ENST00000593053 MEIS3Q99687 375 aa16.36■□□□□ 0.21
PRKCSH-218ENST00000593053 VEZTQ9HBM0 779 aa16.36■□□□□ 0.21
PRKCSH-218ENST00000593053 AOX1Q06278 1338 aa16.36■□□□□ 0.21
PRKCSH-218ENST00000593053 FGFR2P21802 821 aa16.35■□□□□ 0.21
PRKCSH-218ENST00000593053 ATG9AQ7Z3C6 839 aa16.35■□□□□ 0.21
PRKCSH-218ENST00000593053 CSRNP1Q96S65 589 aa16.35■□□□□ 0.21
PRKCSH-218ENST00000593053 SIL1Q9H173 461 aa16.35■□□□□ 0.21
PRKCSH-218ENST00000593053 SERPINA10Q9UK55 444 aa16.35■□□□□ 0.21
PRKCSH-218ENST00000593053 HDAC5Q9UQL6 1122 aa16.35■□□□□ 0.21
PRKCSH-218ENST00000593053 BCAR3O75815 825 aa16.34■□□□□ 0.21
PRKCSH-218ENST00000593053 GRIK5Q16478 980 aa16.34■□□□□ 0.21
PRKCSH-218ENST00000593053 INTS3Q68E01 1043 aaKnown RBP16.34■□□□□ 0.21
PRKCSH-218ENST00000593053 ARMC9Q7Z3E5 817 aa16.34■□□□□ 0.21
PRKCSH-218ENST00000593053 FRAT1Q92837 279 aaPredicted RBP16.34■□□□□ 0.21
PRKCSH-218ENST00000593053 COL1A1P02452 1464 aaPredicted RBP16.34■□□□□ 0.21
PRKCSH-218ENST00000593053 IPO8O15397 1037 aaKnown RBP16.33■□□□□ 0.2
PRKCSH-218ENST00000593053 SLC5A1P13866 664 aa16.33■□□□□ 0.2
PRKCSH-218ENST00000593053 TBC1D22AQ8WUA7 517 aa16.33■□□□□ 0.2
PRKCSH-218ENST00000593053 LPIN2Q92539 896 aa16.33■□□□□ 0.2
PRKCSH-218ENST00000593053 RNF186Q9NXI6 227 aa16.33■□□□□ 0.2
PRKCSH-218ENST00000593053 FZD1Q9UP38 647 aa16.33■□□□□ 0.2
PRKCSH-218ENST00000593053 TNNQ9UQP3 1299 aa16.33■□□□□ 0.2
PRKCSH-218ENST00000593053 PPP2R3BQ9Y5P8 575 aa16.33■□□□□ 0.2
PRKCSH-218ENST00000593053 TRPA1O75762 1119 aa16.32■□□□□ 0.2
PRKCSH-218ENST00000593053 CIAO1O76071 339 aa16.32■□□□□ 0.2
PRKCSH-218ENST00000593053 TRIM27P14373 513 aa16.32■□□□□ 0.2
PRKCSH-218ENST00000593053 CRKP46108 304 aa16.32■□□□□ 0.2
PRKCSH-218ENST00000593053 RASA3Q14644 834 aa16.32■□□□□ 0.2
PRKCSH-218ENST00000593053 DZIP1LQ8IYY4 767 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-218ENST00000593053 TDRD3Q9H7E2 651 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-218ENST00000593053 SAGE1Q9NXZ1 904 aa16.32■□□□□ 0.2
PRKCSH-218ENST00000593053 CEP126Q9P2H0 1117 aa16.32■□□□□ 0.2
PRKCSH-218ENST00000593053 ZNF70Q9UC06 446 aaPredicted RBP16.32■□□□□ 0.2
PRKCSH-218ENST00000593053 FBXO3Q9UK99 471 aa16.32■□□□□ 0.2
PRKCSH-218ENST00000593053 ANGEL1Q9UNK9 670 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-218ENST00000593053 PA2G4Q9UQ80 394 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-218ENST00000593053 GNAI3P08754 354 aa16.31■□□□□ 0.2
PRKCSH-218ENST00000593053 MKRN3Q13064 507 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-218ENST00000593053 ATP2B3Q16720 1220 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms