RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 DPF2Q92785 391 aa18.36■□□□□ 0.53
DDX39A-221ENST00000593026 EAF2Q96CJ1 260 aaPredicted RBP18.36■□□□□ 0.53
DDX39A-221ENST00000593026 LRRCC1Q9C099 1032 aa18.36■□□□□ 0.53
DDX39A-221ENST00000593026 JAG2Q9Y219 1238 aa18.36■□□□□ 0.53
DDX39A-221ENST00000593026 MYH13Q9UKX3 1938 aa18.35■□□□□ 0.53
DDX39A-221ENST00000593026 EPS15P42566 896 aa18.35■□□□□ 0.53
DDX39A-221ENST00000593026 CHAF1AQ13111 956 aaPredicted RBP18.35■□□□□ 0.53
DDX39A-221ENST00000593026 AACSQ86V21 672 aa18.35■□□□□ 0.53
DDX39A-221ENST00000593026 DBNDD2Q9BQY9 259 aa18.35■□□□□ 0.53
DDX39A-221ENST00000593026 MXD3Q9BW11 206 aa18.35■□□□□ 0.53
DDX39A-221ENST00000593026 CCDC8Q9H0W5 538 aaPredicted RBP18.35■□□□□ 0.53
DDX39A-221ENST00000593026 KIF3CO14782 793 aa18.34■□□□□ 0.53
DDX39A-221ENST00000593026 SEMA3EO15041 775 aa18.34■□□□□ 0.53
DDX39A-221ENST00000593026 EPHX2P34913 555 aa18.34■□□□□ 0.53
DDX39A-221ENST00000593026 MICALL2Q8IY33 904 aa18.34■□□□□ 0.53
DDX39A-221ENST00000593026 GMLQ99445 158 aa18.34■□□□□ 0.53
DDX39A-221ENST00000593026 BCL11AQ9H165 835 aa18.34■□□□□ 0.53
DDX39A-221ENST00000593026 RWDD1Q9H446 243 aaPredicted RBP18.34■□□□□ 0.53
DDX39A-221ENST00000593026 TAF1DQ9H5J8 278 aaPredicted RBP18.34■□□□□ 0.53
DDX39A-221ENST00000593026 CNOT7Q9UIV1 285 aaKnown RBP18.34■□□□□ 0.53
DDX39A-221ENST00000593026 DBNLQ9UJU6 430 aaKnown RBP18.34■□□□□ 0.53
DDX39A-221ENST00000593026 H7C1D1 291 aa18.33■□□□□ 0.52
DDX39A-221ENST00000593026 FKBP1AP62942 108 aaKnown RBP18.33■□□□□ 0.52
DDX39A-221ENST00000593026 CCDC158Q5M9N0 1113 aa18.33■□□□□ 0.52
DDX39A-221ENST00000593026 MFSD14BQ5SR56 506 aa18.33■□□□□ 0.52
DDX39A-221ENST00000593026 C16orf71Q8IYS4 520 aaPredicted RBP18.33■□□□□ 0.52
DDX39A-221ENST00000593026 CERS5Q8N5B7 392 aa18.33■□□□□ 0.52
DDX39A-221ENST00000593026 TLR7Q9NYK1 1049 aaKnown RBP18.33■□□□□ 0.52
DDX39A-221ENST00000593026 DENND2AQ9ULE3 1009 aa18.33■□□□□ 0.52
DDX39A-221ENST00000593026 COL1A1P02452 1464 aaPredicted RBP18.33■□□□□ 0.52
DDX39A-221ENST00000593026 SHTN1A0MZ66 631 aa18.32■□□□□ 0.52
DDX39A-221ENST00000593026 SMARCA5O60264 1052 aaPredicted RBP18.32■□□□□ 0.52
DDX39A-221ENST00000593026 TOMM70O94826 608 aa18.32■□□□□ 0.52
DDX39A-221ENST00000593026 NEFLP07196 543 aa18.32■□□□□ 0.52
DDX39A-221ENST00000593026 IFIT2P09913 472 aaKnown RBP18.32■□□□□ 0.52
DDX39A-221ENST00000593026 USP17L8P0C7I0 530 aa18.32■□□□□ 0.52
DDX39A-221ENST00000593026 RASGRF1Q13972 1273 aa18.32■□□□□ 0.52
DDX39A-221ENST00000593026 TTC39AQ5SRH9 613 aa18.32■□□□□ 0.52
DDX39A-221ENST00000593026 TBC1D22AQ8WUA7 517 aa18.32■□□□□ 0.52
DDX39A-221ENST00000593026 GCC1Q96CN9 775 aa18.32■□□□□ 0.52
DDX39A-221ENST00000593026 ADARB2Q9NS39 739 aaKnown RBP18.32■□□□□ 0.52
DDX39A-221ENST00000593026 ZBTB22O15209 634 aa18.31■□□□□ 0.52
DDX39A-221ENST00000593026 UQCRFS1P1P0C7P4 283 aa18.31■□□□□ 0.52
DDX39A-221ENST00000593026 ARID4AP29374 1257 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-221ENST00000593026 PNMA8AQ86V59 439 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-221ENST00000593026 KIAA0825Q8IV33 1275 aa18.31■□□□□ 0.52
DDX39A-221ENST00000593026 OGFOD1Q8N543 542 aa18.31■□□□□ 0.52
DDX39A-221ENST00000593026 WDR66Q8TBY9 1149 aa18.31■□□□□ 0.52
DDX39A-221ENST00000593026 EAPPQ56P03 285 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-221ENST00000593026 PDS5AQ29RF7 1337 aaKnown RBP18.29■□□□□ 0.52
DDX39A-221ENST00000593026 F8W031 263 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-221ENST00000593026 IGHDP01880 384 aa18.29■□□□□ 0.52
DDX39A-221ENST00000593026 ZNF280AP59817 542 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-221ENST00000593026 USP50Q70EL3 339 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-221ENST00000593026 ZBTB47Q9UFB7 747 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-221ENST00000593026 HDAC9Q9UKV0 1011 aa18.29■□□□□ 0.52
DDX39A-221ENST00000593026 MCAMP43121 646 aa18.28■□□□□ 0.52
DDX39A-221ENST00000593026 MMP14P50281 582 aa18.28■□□□□ 0.52
DDX39A-221ENST00000593026 SCARF1Q14162 830 aa18.28■□□□□ 0.52
DDX39A-221ENST00000593026 TBC1D10BQ4KMP7 808 aaPredicted RBP18.28■□□□□ 0.52
DDX39A-221ENST00000593026 SAMD7Q7Z3H4 446 aa18.28■□□□□ 0.52
DDX39A-221ENST00000593026 SPATA5Q8NB90 893 aa18.28■□□□□ 0.52
DDX39A-221ENST00000593026 TRPM4Q8TD43 1214 aa18.28■□□□□ 0.52
DDX39A-221ENST00000593026 ZNF512BQ96KM6 892 aaPredicted RBP18.28■□□□□ 0.52
DDX39A-221ENST00000593026 HMG20BQ9P0W2 317 aa18.28■□□□□ 0.52
DDX39A-221ENST00000593026 SALL1Q9NSC2 1324 aa18.27■□□□□ 0.52
DDX39A-221ENST00000593026 KIF4BQ2VIQ3 1234 aa18.27■□□□□ 0.52
DDX39A-221ENST00000593026 RBM26Q5T8P6 1007 aaKnown RBP18.27■□□□□ 0.52
DDX39A-221ENST00000593026 PI16Q6UXB8 463 aa18.27■□□□□ 0.52
DDX39A-221ENST00000593026 SMC5Q8IY18 1101 aa18.27■□□□□ 0.52
DDX39A-221ENST00000593026 ZGPATQ8N5A5 531 aaKnown RBP18.27■□□□□ 0.52
DDX39A-221ENST00000593026 MYOZ2Q9NPC6 264 aa18.27■□□□□ 0.52
DDX39A-221ENST00000593026 TTF2Q9UNY4 1162 aaKnown RBP18.27■□□□□ 0.52
DDX39A-221ENST00000593026 SUGT1Q9Y2Z0 365 aa18.27■□□□□ 0.52
DDX39A-221ENST00000593026 EGFRP00533 1210 aa18.26■□□□□ 0.51
DDX39A-221ENST00000593026 POTEIP0CG38 1075 aa18.26■□□□□ 0.51
DDX39A-221ENST00000593026 POTEJP0CG39 1038 aa18.26■□□□□ 0.51
DDX39A-221ENST00000593026 GRIK5Q16478 980 aa18.26■□□□□ 0.51
DDX39A-221ENST00000593026 ANKRD45Q5TZF3 282 aa18.26■□□□□ 0.51
DDX39A-221ENST00000593026 LDHDQ86WU2 507 aa18.26■□□□□ 0.51
DDX39A-221ENST00000593026 RBM46Q8TBY0 533 aaKnown RBP18.26■□□□□ 0.51
DDX39A-221ENST00000593026 CLEC11AQ9Y240 323 aa18.26■□□□□ 0.51
DDX39A-221ENST00000593026 ADAMTSL1Q8N6G6 1762 aa18.26■□□□□ 0.51
DDX39A-221ENST00000593026 MAST3O60307 1309 aa18.25■□□□□ 0.51
DDX39A-221ENST00000593026 HIRAP54198 1017 aaPredicted RBP18.25■□□□□ 0.51
DDX39A-221ENST00000593026 SNRKQ9NRH2 765 aa18.25■□□□□ 0.51
DDX39A-221ENST00000593026 ABCF2Q9UG63 623 aa18.25■□□□□ 0.51
DDX39A-221ENST00000593026 AKAP11Q9UKA4 1901 aa18.24■□□□□ 0.51
DDX39A-221ENST00000593026 LDHBP07195 334 aaKnown RBP18.24■□□□□ 0.51
DDX39A-221ENST00000593026 HSPA6P17066 643 aa18.24■□□□□ 0.51
DDX39A-221ENST00000593026 PRDX5P30044 214 aa18.24■□□□□ 0.51
DDX39A-221ENST00000593026 GPATCH3Q96I76 525 aa18.24■□□□□ 0.51
DDX39A-221ENST00000593026 ZAP70P43403 619 aa18.23■□□□□ 0.51
DDX39A-221ENST00000593026 RBM5P52756 815 aaKnown RBP eCLIP18.23■□□□□ 0.514e-7■□□□□ 8.1
DDX39A-221ENST00000593026 FSTL1Q12841 308 aa18.23■□□□□ 0.51
DDX39A-221ENST00000593026 DLGAP5Q15398 846 aa18.23■□□□□ 0.51
DDX39A-221ENST00000593026 SPTY2D1Q68D10 685 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-221ENST00000593026 B4GALNT3Q6L9W6 998 aa18.23■□□□□ 0.51
DDX39A-221ENST00000593026 CHADLQ6NUI6 762 aa18.23■□□□□ 0.51
DDX39A-221ENST00000593026 SMC1BQ8NDV3 1235 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms