RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 POTEFA5A3E0 1075 aa11.7□□□□□ -0.54
APOC1-207ENST00000592176 SNAP23O00161 211 aa11.7□□□□□ -0.54
APOC1-207ENST00000592176 IGF2BP3O00425 579 aaKnown RBP eCLIP11.7□□□□□ -0.54
APOC1-207ENST00000592176 TAF5LO75529 589 aa11.7□□□□□ -0.54
APOC1-207ENST00000592176 USP2O75604 605 aaPredicted RBP11.7□□□□□ -0.54
APOC1-207ENST00000592176 TWISTNBQ3B726 338 aaPredicted RBP11.7□□□□□ -0.54
APOC1-207ENST00000592176 CFAP100Q494V2 611 aa11.7□□□□□ -0.54
APOC1-207ENST00000592176 NBPF12Q5TAG4 269 aaPredicted RBP11.7□□□□□ -0.54
APOC1-207ENST00000592176 C15orf52Q6ZUT6 534 aaKnown RBP11.7□□□□□ -0.54
APOC1-207ENST00000592176 CERS5Q8N5B7 392 aa11.7□□□□□ -0.54
APOC1-207ENST00000592176 PRMT6Q96LA8 375 aaPredicted RBP11.7□□□□□ -0.54
APOC1-207ENST00000592176 MYH16Q9H6N6 1097 aa11.7□□□□□ -0.54
APOC1-207ENST00000592176 PTPN22Q9Y2R2 807 aa11.7□□□□□ -0.54
APOC1-207ENST00000592176 PCDHAC2Q9Y5I4 1007 aa11.7□□□□□ -0.54
APOC1-207ENST00000592176 IREB2P48200 963 aaKnown RBP11.69□□□□□ -0.54
APOC1-207ENST00000592176 RBM5P52756 815 aaKnown RBP eCLIP11.69□□□□□ -0.54
APOC1-207ENST00000592176 CASP7P55210 303 aa11.69□□□□□ -0.54
APOC1-207ENST00000592176 FKBP1AP62942 108 aaKnown RBP11.69□□□□□ -0.54
APOC1-207ENST00000592176 IFIT5Q13325 482 aaKnown RBP11.69□□□□□ -0.54
APOC1-207ENST00000592176 HABP4Q5JVS0 413 aaKnown RBP11.69□□□□□ -0.54
APOC1-207ENST00000592176 ZNF804AQ7Z570 1209 aa11.69□□□□□ -0.54
APOC1-207ENST00000592176 LINS1Q8NG48 757 aa11.69□□□□□ -0.54
APOC1-207ENST00000592176 CD99L2Q8TCZ2 262 aa11.69□□□□□ -0.54
APOC1-207ENST00000592176 DNAAF4Q8WXU2 420 aa11.69□□□□□ -0.54
APOC1-207ENST00000592176 EFCC1Q9HA90 598 aa11.69□□□□□ -0.54
APOC1-207ENST00000592176 VEZTQ9HBM0 779 aa11.69□□□□□ -0.54
APOC1-207ENST00000592176 SPDYE2BA6NHP3 402 aa11.68□□□□□ -0.54
APOC1-207ENST00000592176 SPDYE6P0CI01 402 aa11.68□□□□□ -0.54
APOC1-207ENST00000592176 IL1R1P14778 569 aa11.68□□□□□ -0.54
APOC1-207ENST00000592176 SP3Q02447 781 aa11.68□□□□□ -0.54
APOC1-207ENST00000592176 FLIIQ13045 1269 aa11.68□□□□□ -0.54
APOC1-207ENST00000592176 CRHR2Q13324 411 aa11.68□□□□□ -0.54
APOC1-207ENST00000592176 FKBP5Q13451 457 aaPredicted RBP11.68□□□□□ -0.54
APOC1-207ENST00000592176 RASA3Q14644 834 aa11.68□□□□□ -0.54
APOC1-207ENST00000592176 ANKRD13AQ8IZ07 590 aa11.68□□□□□ -0.54
APOC1-207ENST00000592176 COL1A1P02452 1464 aaPredicted RBP11.68□□□□□ -0.54
APOC1-207ENST00000592176 TESPA1A2RU30 521 aaPredicted RBP11.67□□□□□ -0.54
APOC1-207ENST00000592176 PLIN1O60240 522 aa11.67□□□□□ -0.54
APOC1-207ENST00000592176 EN2P19622 333 aaPredicted RBP11.67□□□□□ -0.54
APOC1-207ENST00000592176 GJA5P36382 358 aa11.67□□□□□ -0.54
APOC1-207ENST00000592176 ARHGEF6Q15052 776 aa11.67□□□□□ -0.54
APOC1-207ENST00000592176 PTPN18Q99952 460 aa11.67□□□□□ -0.54
APOC1-207ENST00000592176 TMEM106CQ9BVX2 250 aa11.67□□□□□ -0.54
APOC1-207ENST00000592176 CHMP3Q9Y3E7 222 aa11.67□□□□□ -0.54
APOC1-207ENST00000592176 PSME4Q14997 1843 aa11.67□□□□□ -0.54
APOC1-207ENST00000592176 IRS2Q9Y4H2 1338 aa11.66□□□□□ -0.54
APOC1-207ENST00000592176 FOXO4P98177 505 aa11.66□□□□□ -0.54
APOC1-207ENST00000592176 CCDC27Q2M243 656 aa11.66□□□□□ -0.54
APOC1-207ENST00000592176 WWC1Q8IX03 1113 aa11.66□□□□□ -0.54
APOC1-207ENST00000592176 ARMC5Q96C12 935 aa11.66□□□□□ -0.54
APOC1-207ENST00000592176 ELP3Q9H9T3 547 aa11.66□□□□□ -0.54
APOC1-207ENST00000592176 JAG2Q9Y219 1238 aa11.66□□□□□ -0.54
APOC1-207ENST00000592176 TNFAIP1Q13829 316 aa11.65□□□□□ -0.54
APOC1-207ENST00000592176 CCDC57Q2TAC2 916 aa11.65□□□□□ -0.54
APOC1-207ENST00000592176 TAF7LQ5H9L4 462 aa11.65□□□□□ -0.54
APOC1-207ENST00000592176 LMBR1LQ6UX01 489 aa11.65□□□□□ -0.54
APOC1-207ENST00000592176 LDHAL6AQ6ZMR3 332 aa11.65□□□□□ -0.54
APOC1-207ENST00000592176 NBPF11Q86T75 865 aa11.65□□□□□ -0.54
APOC1-207ENST00000592176 OPTNQ96CV9 577 aa11.65□□□□□ -0.54
APOC1-207ENST00000592176 CNNM1Q9NRU3 951 aa11.65□□□□□ -0.54
APOC1-207ENST00000592176 ZNF70Q9UC06 446 aaPredicted RBP11.65□□□□□ -0.54
APOC1-207ENST00000592176 AOX1Q06278 1338 aa11.64□□□□□ -0.55
APOC1-207ENST00000592176 MAP3K9P80192 1104 aa11.64□□□□□ -0.55
APOC1-207ENST00000592176 ZNF594Q96JF6 807 aaPredicted RBP11.64□□□□□ -0.55
APOC1-207ENST00000592176 MS4A4AQ96JQ5 239 aa11.64□□□□□ -0.55
APOC1-207ENST00000592176 TDRD3Q9H7E2 651 aaKnown RBP11.64□□□□□ -0.55
APOC1-207ENST00000592176 ZFYVE28Q9HCC9 887 aa11.64□□□□□ -0.55
APOC1-207ENST00000592176 TTF2Q9UNY4 1162 aaKnown RBP11.64□□□□□ -0.55
APOC1-207ENST00000592176 IL16Q14005 1332 aa11.63□□□□□ -0.55
APOC1-207ENST00000592176 FAM205AQ6ZU69 1335 aa11.63□□□□□ -0.55
APOC1-207ENST00000592176 SSC5DA1L4H1 1573 aa11.63□□□□□ -0.55
APOC1-207ENST00000592176 VAMP4O75379 141 aa11.63□□□□□ -0.55
APOC1-207ENST00000592176 HIBADHP31937 336 aaKnown RBP11.63□□□□□ -0.55
APOC1-207ENST00000592176 GTF2A2P52657 109 aa11.63□□□□□ -0.55
APOC1-207ENST00000592176 SPDYE2Q495Y8 402 aa11.63□□□□□ -0.55
APOC1-207ENST00000592176 BEND3Q5T5X7 828 aa11.63□□□□□ -0.55
APOC1-207ENST00000592176 DZIP1LQ8IYY4 767 aaKnown RBP11.63□□□□□ -0.55
APOC1-207ENST00000592176 TDRD7Q8NHU6 1098 aaKnown RBP11.63□□□□□ -0.55
APOC1-207ENST00000592176 SERPINA10Q9UK55 444 aa11.63□□□□□ -0.55
APOC1-207ENST00000592176 CCL15-CCL14A0A0B4J2E2 113 aa11.62□□□□□ -0.55
APOC1-207ENST00000592176 TCP10L2B9ZVM9 353 aa11.62□□□□□ -0.55
APOC1-207ENST00000592176 F6X3S4 739 aa11.62□□□□□ -0.55
APOC1-207ENST00000592176 WDHD1O75717 1129 aaPredicted RBP11.62□□□□□ -0.55
APOC1-207ENST00000592176 TNNI2P48788 182 aa11.62□□□□□ -0.55
APOC1-207ENST00000592176 CAP1Q01518 475 aa11.62□□□□□ -0.55
APOC1-207ENST00000592176 UBE4AQ14139 1066 aa11.62□□□□□ -0.55
APOC1-207ENST00000592176 TAF1CQ15572 869 aaPredicted RBP11.62□□□□□ -0.55
APOC1-207ENST00000592176 CCL15Q16663 113 aa11.62□□□□□ -0.55
APOC1-207ENST00000592176 SLC4A8Q2Y0W8 1093 aa11.62□□□□□ -0.55
APOC1-207ENST00000592176 EPHA10Q5JZY3 1008 aa11.62□□□□□ -0.55
APOC1-207ENST00000592176 MFSD14BQ5SR56 506 aa11.62□□□□□ -0.55
APOC1-207ENST00000592176 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.62□□□□□ -0.55
APOC1-207ENST00000592176 BRI3BPQ8WY22 251 aa11.62□□□□□ -0.55
APOC1-207ENST00000592176 ZNF333Q96JL9 665 aa11.62□□□□□ -0.55
APOC1-207ENST00000592176 FAM84BQ96KN1 310 aaPredicted RBP11.62□□□□□ -0.55
APOC1-207ENST00000592176 TEPSINQ96N21 525 aa11.62□□□□□ -0.55
APOC1-207ENST00000592176 CSADQ9Y600 493 aa11.62□□□□□ -0.55
APOC1-207ENST00000592176 GYG1P46976 350 aa11.61□□□□□ -0.55
APOC1-207ENST00000592176 SLC9C1Q4G0N8 1177 aa11.61□□□□□ -0.55
APOC1-207ENST00000592176 CNKSR2Q8WXI2 1034 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms