RNA–Protein interactions for RNA: ENST00000592159.1

KDM4B-209, Transcript of lysine demethylase 4B, humanhuman

TSL 3

Gene KDM4B, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-209ENST00000592159 THSD7BQ9C0I4 1608 aa11.95□□□□□ -0.5
KDM4B-209ENST00000592159 POLR2AP24928 1970 aaKnown RBP11.94□□□□□ -0.5
KDM4B-209ENST00000592159 ADM5C9JUS6 153 aa11.94□□□□□ -0.5
KDM4B-209ENST00000592159 IRS4O14654 1257 aaPredicted RBP11.94□□□□□ -0.5
KDM4B-209ENST00000592159 RAB11FIP3O75154 756 aa11.94□□□□□ -0.5
KDM4B-209ENST00000592159 G3BP1Q13283 466 aaKnown RBP eCLIP11.94□□□□□ -0.54e-7■□□□□ 8.1
KDM4B-209ENST00000592159 SULF1Q8IWU6 871 aa11.94□□□□□ -0.5
KDM4B-209ENST00000592159 SIL1Q9H173 461 aa11.94□□□□□ -0.5
KDM4B-209ENST00000592159 ANKIB1Q9P2G1 1089 aa11.94□□□□□ -0.5
KDM4B-209ENST00000592159 LAMB2P55268 1798 aa11.94□□□□□ -0.5
KDM4B-209ENST00000592159 EGFRP00533 1210 aa11.93□□□□□ -0.5
KDM4B-209ENST00000592159 HSP90B1P14625 803 aaKnown RBP11.93□□□□□ -0.5
KDM4B-209ENST00000592159 KIF4BQ2VIQ3 1234 aa11.93□□□□□ -0.5
KDM4B-209ENST00000592159 RABL6Q3YEC7 729 aaPredicted RBP11.93□□□□□ -0.5
KDM4B-209ENST00000592159 TBC1D16Q8TBP0 767 aa11.93□□□□□ -0.5
KDM4B-209ENST00000592159 IL1RAPL2Q9NP60 686 aa11.93□□□□□ -0.5
KDM4B-209ENST00000592159 TSHZ2Q9NRE2 1034 aa11.93□□□□□ -0.5
KDM4B-209ENST00000592159 RNF186Q9NXI6 227 aa11.93□□□□□ -0.5
KDM4B-209ENST00000592159 FAM155AB1AL88 458 aaPredicted RBP11.92□□□□□ -0.5
KDM4B-209ENST00000592159 VIL1P09327 827 aaKnown RBP11.92□□□□□ -0.5
KDM4B-209ENST00000592159 ERC1Q8IUD2 1116 aa11.92□□□□□ -0.5
KDM4B-209ENST00000592159 KLHDC4Q8TBB5 520 aa11.92□□□□□ -0.5
KDM4B-209ENST00000592159 RHPN1Q8TCX5 695 aa11.92□□□□□ -0.5
KDM4B-209ENST00000592159 CNKSR2Q8WXI2 1034 aa11.92□□□□□ -0.5
KDM4B-209ENST00000592159 KIF1BPQ96EK5 621 aa11.92□□□□□ -0.5
KDM4B-209ENST00000592159 CCDC85AQ96PX6 553 aaPredicted RBP11.92□□□□□ -0.5
KDM4B-209ENST00000592159 RNF216Q9NWF9 866 aaPredicted RBP11.92□□□□□ -0.5
KDM4B-209ENST00000592159 SAGE1Q9NXZ1 904 aa11.92□□□□□ -0.5
KDM4B-209ENST00000592159 NOP58Q9Y2X3 529 aaKnown RBP11.92□□□□□ -0.5
KDM4B-209ENST00000592159 UFL1O94874 794 aa11.91□□□□□ -0.5
KDM4B-209ENST00000592159 SCARF1Q14162 830 aa11.91□□□□□ -0.5
KDM4B-209ENST00000592159 OTUD7AQ8TE49 926 aaPredicted RBP11.91□□□□□ -0.5
KDM4B-209ENST00000592159 CSRNP1Q96S65 589 aa11.91□□□□□ -0.5
KDM4B-209ENST00000592159 GGA3Q9NZ52 723 aa11.91□□□□□ -0.5
KDM4B-209ENST00000592159 GGA1Q9UJY5 639 aa11.91□□□□□ -0.5
KDM4B-209ENST00000592159 PDE8AO60658 829 aa11.9□□□□□ -0.5
KDM4B-209ENST00000592159 SOX10P56693 466 aa11.9□□□□□ -0.5
KDM4B-209ENST00000592159 CCDC57Q2TAC2 916 aa11.9□□□□□ -0.5
KDM4B-209ENST00000592159 TAF7LQ5H9L4 462 aa11.9□□□□□ -0.5
KDM4B-209ENST00000592159 PLEKHM2Q8IWE5 1019 aa11.9□□□□□ -0.5
KDM4B-209ENST00000592159 REM2Q8IYK8 340 aaPredicted RBP11.9□□□□□ -0.5
KDM4B-209ENST00000592159 CDCA5Q96FF9 252 aa11.9□□□□□ -0.5
KDM4B-209ENST00000592159 PLA2G12BQ9BX93 195 aa11.9□□□□□ -0.5
KDM4B-209ENST00000592159 SEC31BQ9NQW1 1179 aa11.9□□□□□ -0.5
KDM4B-209ENST00000592159 RTL9Q8NET4 1388 aa11.9□□□□□ -0.5
KDM4B-209ENST00000592159 SLC10A3P09131 477 aa11.89□□□□□ -0.51
KDM4B-209ENST00000592159 RFX5P48382 616 aaPredicted RBP11.89□□□□□ -0.51
KDM4B-209ENST00000592159 CTSWP56202 376 aa11.89□□□□□ -0.51
KDM4B-209ENST00000592159 PTPN12Q05209 780 aaKnown RBP11.89□□□□□ -0.51
KDM4B-209ENST00000592159 C1QBPQ07021 282 aaKnown RBP11.89□□□□□ -0.51
KDM4B-209ENST00000592159 CCDC152Q4G0S7 254 aa11.89□□□□□ -0.51
KDM4B-209ENST00000592159 ANGEL2Q5VTE6 544 aaKnown RBP11.89□□□□□ -0.51
KDM4B-209ENST00000592159 RSBN1LQ6PCB5 846 aaPredicted RBP11.89□□□□□ -0.51
KDM4B-209ENST00000592159 AGBL3Q8NEM8 1001 aa11.89□□□□□ -0.51
KDM4B-209ENST00000592159 ZNF594Q96JF6 807 aaPredicted RBP11.89□□□□□ -0.51
KDM4B-209ENST00000592159 COPRSQ9NQ92 184 aa11.89□□□□□ -0.51
KDM4B-209ENST00000592159 PODXL2Q9NZ53 605 aa11.89□□□□□ -0.51
KDM4B-209ENST00000592159 ASTN2O75129 1339 aaPredicted RBP11.88□□□□□ -0.51
KDM4B-209ENST00000592159 CSF1RP07333 972 aa11.88□□□□□ -0.51
KDM4B-209ENST00000592159 USP17L8P0C7I0 530 aa11.88□□□□□ -0.51
KDM4B-209ENST00000592159 IFIT5Q13325 482 aaKnown RBP11.88□□□□□ -0.51
KDM4B-209ENST00000592159 TTLL12Q14166 644 aaPredicted RBP11.88□□□□□ -0.51
KDM4B-209ENST00000592159 CTU1Q7Z7A3 348 aaKnown RBP11.88□□□□□ -0.51
KDM4B-209ENST00000592159 CLASRPQ8N2M8 674 aaKnown RBP11.88□□□□□ -0.51
KDM4B-209ENST00000592159 TTLL11Q8NHH1 800 aa11.88□□□□□ -0.51
KDM4B-209ENST00000592159 HDAC9Q9UKV0 1011 aa11.88□□□□□ -0.51
KDM4B-209ENST00000592159 DUOX1Q9NRD9 1551 aa11.88□□□□□ -0.51
KDM4B-209ENST00000592159 AKAP11Q9UKA4 1901 aa11.88□□□□□ -0.51
KDM4B-209ENST00000592159 ANKRD18BA2A2Z9 1011 aa11.87□□□□□ -0.51
KDM4B-209ENST00000592159 SASH1O94885 1247 aa11.87□□□□□ -0.51
KDM4B-209ENST00000592159 IFIT2P09913 472 aaKnown RBP11.87□□□□□ -0.51
KDM4B-209ENST00000592159 MX1P20591 662 aa11.87□□□□□ -0.51
KDM4B-209ENST00000592159 ITGA6P23229 1130 aa11.87□□□□□ -0.51
KDM4B-209ENST00000592159 PDE1AP54750 535 aa11.87□□□□□ -0.51
KDM4B-209ENST00000592159 ZNF280AP59817 542 aaPredicted RBP11.87□□□□□ -0.51
KDM4B-209ENST00000592159 AACSQ86V21 672 aa11.87□□□□□ -0.51
KDM4B-209ENST00000592159 ANKRD18AQ8IVF6 992 aa11.87□□□□□ -0.51
KDM4B-209ENST00000592159 FBXW7Q969H0 707 aa11.87□□□□□ -0.51
KDM4B-209ENST00000592159 BACH2Q9BYV9 841 aa11.87□□□□□ -0.51
KDM4B-209ENST00000592159 GREM2Q9H772 168 aa11.87□□□□□ -0.51
KDM4B-209ENST00000592159 MYOZ2Q9NPC6 264 aa11.87□□□□□ -0.51
KDM4B-209ENST00000592159 PCDH10Q9P2E7 1040 aa11.87□□□□□ -0.51
KDM4B-209ENST00000592159 DDX60Q8IY21 1712 aaKnown RBP11.86□□□□□ -0.51
KDM4B-209ENST00000592159 USP17L3A6NCW0 530 aa11.86□□□□□ -0.51
KDM4B-209ENST00000592159 USP17L4A6NCW7 530 aa11.86□□□□□ -0.51
KDM4B-209ENST00000592159 UBE2Q2LH0YL09 131 aa11.86□□□□□ -0.51
KDM4B-209ENST00000592159 ATP2B4P23634 1241 aa11.86□□□□□ -0.51
KDM4B-209ENST00000592159 FKBP1BP68106 108 aa11.86□□□□□ -0.51
KDM4B-209ENST00000592159 TFCP2Q12800 502 aa11.86□□□□□ -0.51
KDM4B-209ENST00000592159 C8orf34Q49A92 452 aa11.86□□□□□ -0.51
KDM4B-209ENST00000592159 TTC22Q5TAA0 569 aa11.86□□□□□ -0.51
KDM4B-209ENST00000592159 TSHZ3Q63HK5 1081 aa11.86□□□□□ -0.51
KDM4B-209ENST00000592159 USP17L1Q7RTZ2 530 aa11.86□□□□□ -0.51
KDM4B-209ENST00000592159 SCAF8Q9UPN6 1271 aaKnown RBP11.86□□□□□ -0.51
KDM4B-209ENST00000592159 XDHP47989 1333 aa11.86□□□□□ -0.51
KDM4B-209ENST00000592159 EYA2O00167 538 aa11.85□□□□□ -0.51
KDM4B-209ENST00000592159 TBC1D8O95759 1140 aa11.85□□□□□ -0.51
KDM4B-209ENST00000592159 NF2P35240 595 aa11.85□□□□□ -0.51
KDM4B-209ENST00000592159 IL15P40933 162 aaPredicted RBP11.85□□□□□ -0.51
KDM4B-209ENST00000592159 LRRC24Q50LG9 513 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms