RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 G3V3G9 751 aa12.04□□□□□ -0.48
SMARCA4-218ENST00000592158 ADCY3O60266 1144 aa12.04□□□□□ -0.48
SMARCA4-218ENST00000592158 NTSR2O95665 410 aa12.04□□□□□ -0.48
SMARCA4-218ENST00000592158 ELNP15502 786 aa12.04□□□□□ -0.48
SMARCA4-218ENST00000592158 GRAPQ13588 217 aa12.04□□□□□ -0.48
SMARCA4-218ENST00000592158 DCAF8Q5TAQ9 597 aa12.04□□□□□ -0.48
SMARCA4-218ENST00000592158 C17orf99Q6UX52 265 aa12.04□□□□□ -0.48
SMARCA4-218ENST00000592158 PODNQ7Z5L7 613 aa12.04□□□□□ -0.48
SMARCA4-218ENST00000592158 ANKRD13AQ8IZ07 590 aa12.04□□□□□ -0.48
SMARCA4-218ENST00000592158 GRAPLQ8TC17 118 aaPredicted RBP12.04□□□□□ -0.48
SMARCA4-218ENST00000592158 KHSRPQ92945 711 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMARCA4-218ENST00000592158 ELP3Q9H9T3 547 aa12.04□□□□□ -0.48
SMARCA4-218ENST00000592158 EPG5Q9HCE0 2579 aa12.03□□□□□ -0.48
SMARCA4-218ENST00000592158 SASH1O94885 1247 aa12.03□□□□□ -0.48
SMARCA4-218ENST00000592158 IREB2P48200 963 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-218ENST00000592158 GTF2A2P52657 109 aa12.03□□□□□ -0.48
SMARCA4-218ENST00000592158 PDE3AQ14432 1141 aa12.03□□□□□ -0.48
SMARCA4-218ENST00000592158 NBPF10Q6P3W6 841 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-218ENST00000592158 DDX46Q7L014 1031 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-218ENST00000592158 CARD11Q9BXL7 1154 aa12.03□□□□□ -0.48
SMARCA4-218ENST00000592158 CPA4Q9UI42 421 aa12.03□□□□□ -0.48
SMARCA4-218ENST00000592158 GABRQQ9UN88 632 aa12.03□□□□□ -0.48
SMARCA4-218ENST00000592158 LAMB2P55268 1798 aa12.02□□□□□ -0.48
SMARCA4-218ENST00000592158 PRR33A8MZF0 331 aa12.02□□□□□ -0.49
SMARCA4-218ENST00000592158 CCDC85BQ15834 202 aaPredicted RBP12.02□□□□□ -0.49
SMARCA4-218ENST00000592158 C9orf50Q5SZB4 431 aa12.02□□□□□ -0.49
SMARCA4-218ENST00000592158 AKNAD1Q5T1N1 836 aa12.02□□□□□ -0.49
SMARCA4-218ENST00000592158 ZBTB38Q8NAP3 1195 aaPredicted RBP12.02□□□□□ -0.49
SMARCA4-218ENST00000592158 PHOX2BQ99453 314 aa12.02□□□□□ -0.49
SMARCA4-218ENST00000592158 ZC3H12CQ9C0D7 883 aaKnown RBP12.02□□□□□ -0.49
SMARCA4-218ENST00000592158 PFASO15067 1338 aa12.02□□□□□ -0.49
SMARCA4-218ENST00000592158 ANKRD36CQ5JPF3 1778 aa12.02□□□□□ -0.49
SMARCA4-218ENST00000592158 MGAMO43451 1857 aa12.02□□□□□ -0.49
SMARCA4-218ENST00000592158 KMT2BQ9UMN6 2715 aaPredicted RBP12.02□□□□□ -0.49
SMARCA4-218ENST00000592158 REV3LO60673 3130 aa12.01□□□□□ -0.49
SMARCA4-218ENST00000592158 USP2O75604 605 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-218ENST00000592158 TMC4Q7Z404 712 aa12.01□□□□□ -0.49
SMARCA4-218ENST00000592158 UIMC1Q96RL1 719 aa12.01□□□□□ -0.49
SMARCA4-218ENST00000592158 GAS2L1Q99501 681 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-218ENST00000592158 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMARCA4-218ENST00000592158 DEFB129Q9H1M3 183 aa12.01□□□□□ -0.49
SMARCA4-218ENST00000592158 ATRXP46100 2492 aa12.01□□□□□ -0.49
SMARCA4-218ENST00000592158 OTOFQ9HC10 1997 aa12.01□□□□□ -0.49
SMARCA4-218ENST00000592158 COL1A1P02452 1464 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-218ENST00000592158 KCNQ3O43525 872 aa12□□□□□ -0.49
SMARCA4-218ENST00000592158 SLC24A1O60721 1099 aa12□□□□□ -0.49
SMARCA4-218ENST00000592158 GPSM2P81274 684 aa12□□□□□ -0.49
SMARCA4-218ENST00000592158 TEFQ10587 303 aa12□□□□□ -0.49
SMARCA4-218ENST00000592158 SLC10A5Q5PT55 438 aa12□□□□□ -0.49
SMARCA4-218ENST00000592158 CARD14Q9BXL6 1004 aa12□□□□□ -0.49
SMARCA4-218ENST00000592158 KCNH6Q9H252 994 aa12□□□□□ -0.49
SMARCA4-218ENST00000592158 ZCCHC17Q9NP64 241 aaKnown RBP12□□□□□ -0.49
SMARCA4-218ENST00000592158 COL3A1P02461 1466 aaPredicted RBP12□□□□□ -0.49
SMARCA4-218ENST00000592158 ERVV-1B6SEH8 477 aa11.99□□□□□ -0.49
SMARCA4-218ENST00000592158 BTBD19C9JJ37 291 aa11.99□□□□□ -0.49
SMARCA4-218ENST00000592158 RGS20O76081 388 aa11.99□□□□□ -0.49
SMARCA4-218ENST00000592158 ITGB8P26012 769 aa11.99□□□□□ -0.49
SMARCA4-218ENST00000592158 KCNQ1P51787 676 aa11.99□□□□□ -0.49
SMARCA4-218ENST00000592158 KCTD2Q14681 263 aa11.99□□□□□ -0.49
SMARCA4-218ENST00000592158 LRRC26Q2I0M4 334 aa11.99□□□□□ -0.49
SMARCA4-218ENST00000592158 PPP1R42Q7Z4L9 355 aa11.99□□□□□ -0.49
SMARCA4-218ENST00000592158 OGFOD1Q8N543 542 aa11.99□□□□□ -0.49
SMARCA4-218ENST00000592158 TBC1D16Q8TBP0 767 aa11.99□□□□□ -0.49
SMARCA4-218ENST00000592158 PXYLP1Q8TE99 480 aa11.99□□□□□ -0.49
SMARCA4-218ENST00000592158 CXXC1Q9P0U4 656 aaPredicted RBP11.99□□□□□ -0.49
SMARCA4-218ENST00000592158 ZFHX4Q86UP3 3567 aa11.98□□□□□ -0.49
SMARCA4-218ENST00000592158 FCGRTP55899 365 aa11.98□□□□□ -0.49
SMARCA4-218ENST00000592158 TFF2Q03403 129 aa11.98□□□□□ -0.49
SMARCA4-218ENST00000592158 SUPT20HL1Q3ZLR7 823 aa11.98□□□□□ -0.49
SMARCA4-218ENST00000592158 ERMP1Q7Z2K6 904 aa11.98□□□□□ -0.49
SMARCA4-218ENST00000592158 NGEFQ8N5V2 710 aa11.98□□□□□ -0.49
SMARCA4-218ENST00000592158 TESK2Q96S53 571 aa11.98□□□□□ -0.49
SMARCA4-218ENST00000592158 SIPA1L3O60292 1781 aaPredicted RBP11.97□□□□□ -0.49
SMARCA4-218ENST00000592158 MAP3K15Q6ZN16 1313 aa11.97□□□□□ -0.49
SMARCA4-218ENST00000592158 USP17L3A6NCW0 530 aa11.97□□□□□ -0.49
SMARCA4-218ENST00000592158 USP17L4A6NCW7 530 aa11.97□□□□□ -0.49
SMARCA4-218ENST00000592158 PI4K2BG5E9Z4 385 aa11.97□□□□□ -0.49
SMARCA4-218ENST00000592158 FLT3LGP49771 235 aa11.97□□□□□ -0.49
SMARCA4-218ENST00000592158 MTHFSDQ2M296 383 aaKnown RBP11.97□□□□□ -0.49
SMARCA4-218ENST00000592158 AAK1Q2M2I8 961 aa11.97□□□□□ -0.49
SMARCA4-218ENST00000592158 USP17L1Q7RTZ2 530 aa11.97□□□□□ -0.49
SMARCA4-218ENST00000592158 TSPYL2Q9H2G4 693 aaPredicted RBP11.97□□□□□ -0.49
SMARCA4-218ENST00000592158 ZNF576Q9H609 170 aa11.97□□□□□ -0.49
SMARCA4-218ENST00000592158 DCHS1Q96JQ0 3298 aa11.97□□□□□ -0.49
SMARCA4-218ENST00000592158 LTBP2Q14767 1821 aa11.96□□□□□ -0.49
SMARCA4-218ENST00000592158 NBPF12Q5TAG4 269 aaPredicted RBP11.96□□□□□ -0.49
SMARCA4-218ENST00000592158 ZNF34Q8IZ26 560 aa11.96□□□□□ -0.49
SMARCA4-218ENST00000592158 PTPRZ1P23471 2315 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-218ENST00000592158 CETPP11597 493 aa11.95□□□□□ -0.5
SMARCA4-218ENST00000592158 HCLS1P14317 486 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-218ENST00000592158 MXD3Q9BW11 206 aa11.95□□□□□ -0.5
SMARCA4-218ENST00000592158 SNRPA1P09661 255 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-218ENST00000592158 U2AF1L5P0DN76 240 aaPredicted RBP11.94□□□□□ -0.5
SMARCA4-218ENST00000592158 DNAJB2P25686 324 aa11.94□□□□□ -0.5
SMARCA4-218ENST00000592158 U2AF1Q01081 240 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMARCA4-218ENST00000592158 IRF5Q13568 498 aa11.94□□□□□ -0.5
SMARCA4-218ENST00000592158 UTP14AQ9BVJ6 771 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-218ENST00000592158 TAOK2Q9UL54 1235 aa11.94□□□□□ -0.5
SMARCA4-218ENST00000592158 OGDHLQ9ULD0 1010 aa11.94□□□□□ -0.5
SMARCA4-218ENST00000592158 PPP2R3BQ9Y5P8 575 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms