RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SIL1Q9H173 461 aa33.95■■■■□ 3.03
SMAD4-213ENST00000591914 HDAC9Q9UKV0 1011 aa33.95■■■■□ 3.03
SMAD4-213ENST00000591914 TLL2Q9Y6L7 1015 aa33.95■■■■□ 3.03
SMAD4-213ENST00000591914 PITPNM2Q9BZ72 1349 aa33.95■■■■□ 3.03
SMAD4-213ENST00000591914 GNAI2P04899 355 aa33.94■■■■□ 3.02
SMAD4-213ENST00000591914 VEGFBP49765 207 aa33.94■■■■□ 3.02
SMAD4-213ENST00000591914 NBPF9Q3BBW0 867 aa33.94■■■■□ 3.02
SMAD4-213ENST00000591914 WNT10BO00744 389 aa33.93■■■■□ 3.02
SMAD4-213ENST00000591914 CAVIN4Q5BKX8 364 aa33.93■■■■□ 3.02
SMAD4-213ENST00000591914 FTSJ3Q8IY81 847 aaKnown RBP33.93■■■■□ 3.02
SMAD4-213ENST00000591914 DZIP1LQ8IYY4 767 aaKnown RBP33.93■■■■□ 3.02
SMAD4-213ENST00000591914 ZNF408Q9H9D4 720 aa33.93■■■■□ 3.02
SMAD4-213ENST00000591914 PA2G4Q9UQ80 394 aaKnown RBP33.93■■■■□ 3.02
SMAD4-213ENST00000591914 JAG2Q9Y219 1238 aa33.93■■■■□ 3.02
SMAD4-213ENST00000591914 SRGAP3O43295 1099 aa33.92■■■■□ 3.02
SMAD4-213ENST00000591914 IFIT1P09914 478 aaKnown RBP33.92■■■■□ 3.02
SMAD4-213ENST00000591914 VPS37DQ86XT2 251 aa33.92■■■■□ 3.02
SMAD4-213ENST00000591914 RLBP1P12271 317 aa33.91■■■■□ 3.02
SMAD4-213ENST00000591914 IL15P40933 162 aaPredicted RBP33.91■■■■□ 3.02
SMAD4-213ENST00000591914 SAPCD2Q86UD0 394 aa33.91■■■■□ 3.02
SMAD4-213ENST00000591914 LPIN2Q92539 896 aa33.91■■■■□ 3.02
SMAD4-213ENST00000591914 ZBED3Q96IU2 234 aaPredicted RBP33.91■■■■□ 3.02
SMAD4-213ENST00000591914 ARAP2Q8WZ64 1704 aa33.9■■■■□ 3.02
SMAD4-213ENST00000591914 CEP126Q9P2H0 1117 aa33.89■■■■□ 3.02
SMAD4-213ENST00000591914 SLC5A1P13866 664 aa33.88■■■■□ 3.01
SMAD4-213ENST00000591914 BCAMP50895 628 aa33.88■■■■□ 3.01
SMAD4-213ENST00000591914 MFSD14BQ5SR56 506 aa33.88■■■■□ 3.01
SMAD4-213ENST00000591914 MTMR14Q8NCE2 650 aa33.88■■■■□ 3.01
SMAD4-213ENST00000591914 HHIPL1Q96JK4 782 aa33.87■■■■□ 3.01
SMAD4-213ENST00000591914 IQSEC3Q9UPP2 1182 aaPredicted RBP33.87■■■■□ 3.01
SMAD4-213ENST00000591914 F8W031 263 aaPredicted RBP33.86■■■■□ 3.01
SMAD4-213ENST00000591914 ATP2B3Q16720 1220 aa33.86■■■■□ 3.01
SMAD4-213ENST00000591914 CDCA5Q96FF9 252 aa33.86■■■■□ 3.01
SMAD4-213ENST00000591914 WDR33Q9C0J8 1336 aaKnown RBP33.85■■■■□ 3.01
SMAD4-213ENST00000591914 DLGAP5Q15398 846 aa33.85■■■■□ 3.01
SMAD4-213ENST00000591914 ITPRIPQ8IWB1 547 aa33.85■■■■□ 3.01
SMAD4-213ENST00000591914 PNMA6EA0A0J9YXQ4 647 aa33.83■■■■□ 3.01
SMAD4-213ENST00000591914 ZBTB7BO15156 539 aaPredicted RBP33.83■■■■□ 3.01
SMAD4-213ENST00000591914 CAPNS2Q96L46 248 aa33.83■■■■□ 3.01
SMAD4-213ENST00000591914 GBA2Q9HCG7 927 aaPredicted RBP33.83■■■■□ 3.01
SMAD4-213ENST00000591914 SCAF8Q9UPN6 1271 aaKnown RBP33.83■■■■□ 3.01
SMAD4-213ENST00000591914 THSD7BQ9C0I4 1608 aa33.82■■■■□ 3.01
SMAD4-213ENST00000591914 FRAT2O75474 233 aaPredicted RBP33.82■■■■□ 3
SMAD4-213ENST00000591914 HSPA1AP0DMV8 641 aaKnown RBP33.82■■■■□ 3
SMAD4-213ENST00000591914 HSPA1BP0DMV9 641 aaKnown RBP33.82■■■■□ 3
SMAD4-213ENST00000591914 ECE1P42892 770 aa33.82■■■■□ 3
SMAD4-213ENST00000591914 CFAP100Q494V2 611 aa33.82■■■■□ 3
SMAD4-213ENST00000591914 CYP4F22Q6NT55 531 aa33.82■■■■□ 3
SMAD4-213ENST00000591914 TBC1D22AQ8WUA7 517 aa33.82■■■■□ 3
SMAD4-213ENST00000591914 ECM29Q5VYK3 1845 aa33.81■■■■□ 3
SMAD4-213ENST00000591914 CHAF1AQ13111 956 aaPredicted RBP33.81■■■■□ 3
SMAD4-213ENST00000591914 PAXIP1Q6ZW49 1069 aaPredicted RBP33.81■■■■□ 3
SMAD4-213ENST00000591914 PCDHAC2Q9Y5I4 1007 aa33.81■■■■□ 3
SMAD4-213ENST00000591914 SPDYE2BA6NHP3 402 aa33.8■■■■□ 3
SMAD4-213ENST00000591914 SPDYE6P0CI01 402 aa33.8■■■■□ 3
SMAD4-213ENST00000591914 APOBEC3FQ8IUX4 373 aaKnown RBP33.8■■■■□ 3
SMAD4-213ENST00000591914 C2orf69Q8N8R5 385 aa33.8■■■■□ 3
SMAD4-213ENST00000591914 RCAN3Q9UKA8 241 aa33.8■■■■□ 3
SMAD4-213ENST00000591914 TTF2Q9UNY4 1162 aaKnown RBP33.8■■■■□ 3
SMAD4-213ENST00000591914 HUNKP57058 714 aa33.79■■■■□ 3
SMAD4-213ENST00000591914 PANK1Q8TE04 598 aa33.79■■■■□ 3
SMAD4-213ENST00000591914 SERPINA10Q9UK55 444 aa33.79■■■■□ 3
SMAD4-213ENST00000591914 PRMT6Q96LA8 375 aaPredicted RBP33.78■■■■□ 3
SMAD4-213ENST00000591914 MYH13Q9UKX3 1938 aa33.78■■■■□ 3
SMAD4-213ENST00000591914 MS4A1P11836 297 aa33.77■■■■□ 3
SMAD4-213ENST00000591914 POLA2Q14181 598 aa33.77■■■■□ 3
SMAD4-213ENST00000591914 GRIK5Q16478 980 aa33.77■■■■□ 3
SMAD4-213ENST00000591914 ATP8B2P98198 1209 aa33.76■■■□□ 2.99
SMAD4-213ENST00000591914 TFCP2Q12800 502 aa33.76■■■□□ 2.99
SMAD4-213ENST00000591914 C1orf115Q9H7X2 142 aa33.76■■■□□ 2.99
SMAD4-213ENST00000591914 COL1A1P02452 1464 aaPredicted RBP33.76■■■□□ 2.99
SMAD4-213ENST00000591914 MYO1BO43795 1136 aa33.75■■■□□ 2.99
SMAD4-213ENST00000591914 GRM1Q13255 1194 aa33.75■■■□□ 2.99
SMAD4-213ENST00000591914 SSH3Q8TE77 659 aa33.75■■■□□ 2.99
SMAD4-213ENST00000591914 PAPPA2Q9BXP8 1791 aa33.75■■■□□ 2.99
SMAD4-213ENST00000591914 ZBTB22O15209 634 aa33.74■■■□□ 2.99
SMAD4-213ENST00000591914 RBM5P52756 815 aaKnown RBP eCLIP33.74■■■□□ 2.99
SMAD4-213ENST00000591914 FKBP1BP68106 108 aa33.74■■■□□ 2.99
SMAD4-213ENST00000591914 PRAMEF18Q5VWM3 479 aa33.74■■■□□ 2.99
SMAD4-213ENST00000591914 AKAP2Q9Y2D5 859 aa33.74■■■□□ 2.99
SMAD4-213ENST00000591914 SUGT1Q9Y2Z0 365 aa33.74■■■□□ 2.99
SMAD4-213ENST00000591914 AOX1Q06278 1338 aa33.74■■■□□ 2.99
SMAD4-213ENST00000591914 ADORA1P30542 326 aa33.73■■■□□ 2.99
SMAD4-213ENST00000591914 GNL3LQ9NVN8 582 aaKnown RBP33.73■■■□□ 2.99
SMAD4-213ENST00000591914 WBP1LQ9NX94 342 aa33.73■■■□□ 2.99
SMAD4-213ENST00000591914 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.73■■■□□ 2.99
SMAD4-213ENST00000591914 PHKA1P46020 1223 aa33.72■■■□□ 2.99
SMAD4-213ENST00000591914 TIMM10P62072 90 aa33.72■■■□□ 2.99
SMAD4-213ENST00000591914 HDLBPQ00341 1268 aaKnown RBP33.72■■■□□ 2.99
SMAD4-213ENST00000591914 WDR66Q8TBY9 1149 aa33.72■■■□□ 2.99
SMAD4-213ENST00000591914 A0A1B0GUL7 405 aa33.71■■■□□ 2.99
SMAD4-213ENST00000591914 SEMA3EO15041 775 aa33.71■■■□□ 2.99
SMAD4-213ENST00000591914 MAP2K2P36507 400 aa33.71■■■□□ 2.99
SMAD4-213ENST00000591914 CRKP46108 304 aa33.71■■■□□ 2.99
SMAD4-213ENST00000591914 G3BP1Q13283 466 aaKnown RBP eCLIP33.71■■■□□ 2.99
SMAD4-213ENST00000591914 RGMBQ6NW40 437 aa33.71■■■□□ 2.99
SMAD4-213ENST00000591914 DEFB129Q9H1M3 183 aa33.71■■■□□ 2.99
SMAD4-213ENST00000591914 CLRN2A0PK11 232 aa33.7■■■□□ 2.99
SMAD4-213ENST00000591914 MAP2K1Q02750 393 aaPredicted RBP33.7■■■□□ 2.99
SMAD4-213ENST00000591914 CCDC102BQ68D86 513 aa33.7■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms