RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 SNPHO15079 494 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 IPO8O15397 1037 aaKnown RBP8.07□□□□□ -1.12
VPS4B-205ENST00000591383 BRD1O95696 1058 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 IGKV5-2P06315 115 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 TRIM27P14373 513 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 LMOD1P29536 600 aaPredicted RBP8.07□□□□□ -1.12
VPS4B-205ENST00000591383 TM4SF1P30408 202 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 ERFEQ4G0M1 354 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 SUSD4Q5VX71 490 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 ZKSCAN2Q63HK3 967 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 NLGN2Q8NFZ4 835 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 LINS1Q8NG48 757 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 PRR7Q8TB68 274 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 SYMPKQ92797 1274 aaKnown RBP8.07□□□□□ -1.12
VPS4B-205ENST00000591383 UCN2Q96RP3 112 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 ISCA1Q9BUE6 129 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 SRCIN1Q9C0H9 1055 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 MTMR7Q9Y216 660 aa8.07□□□□□ -1.12
VPS4B-205ENST00000591383 RNF123Q5XPI4 1314 aa8.06□□□□□ -1.12
VPS4B-205ENST00000591383 PLIN1O60240 522 aa8.06□□□□□ -1.12
VPS4B-205ENST00000591383 CFHP08603 1231 aa8.06□□□□□ -1.12
VPS4B-205ENST00000591383 HCLS1P14317 486 aaPredicted RBP8.06□□□□□ -1.12
VPS4B-205ENST00000591383 SOX11P35716 441 aa8.06□□□□□ -1.12
VPS4B-205ENST00000591383 KCNA1Q09470 495 aa8.06□□□□□ -1.12
VPS4B-205ENST00000591383 NR6A1Q15406 480 aa8.06□□□□□ -1.12
VPS4B-205ENST00000591383 ATF7IPQ6VMQ6 1270 aa8.06□□□□□ -1.12
VPS4B-205ENST00000591383 TPTE2Q6XPS3 522 aa8.06□□□□□ -1.12
VPS4B-205ENST00000591383 UBE3BQ7Z3V4 1068 aa8.06□□□□□ -1.12
VPS4B-205ENST00000591383 SLF2Q8IX21 1173 aa8.06□□□□□ -1.12
VPS4B-205ENST00000591383 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.06□□□□□ -1.12
VPS4B-205ENST00000591383 CCDC191Q8NCU4 936 aa8.06□□□□□ -1.12
VPS4B-205ENST00000591383 JARID2Q92833 1246 aaPredicted RBP8.06□□□□□ -1.12
VPS4B-205ENST00000591383 TFIP11Q9UBB9 837 aaKnown RBP8.06□□□□□ -1.12
VPS4B-205ENST00000591383 CARNS1A5YM72 827 aa8.05□□□□□ -1.12
VPS4B-205ENST00000591383 IRS4O14654 1257 aaPredicted RBP8.05□□□□□ -1.12
VPS4B-205ENST00000591383 CHRNA5P30532 468 aa8.05□□□□□ -1.12
VPS4B-205ENST00000591383 SLC4A3P48751 1232 aa8.05□□□□□ -1.12
VPS4B-205ENST00000591383 CCT4P50991 539 aaKnown RBP8.05□□□□□ -1.12
VPS4B-205ENST00000591383 GCKRQ14397 625 aa8.05□□□□□ -1.12
VPS4B-205ENST00000591383 BEND3Q5T5X7 828 aa8.05□□□□□ -1.12
VPS4B-205ENST00000591383 C2CD5Q86YS7 1000 aa8.05□□□□□ -1.12
VPS4B-205ENST00000591383 ITPRIPQ8IWB1 547 aa8.05□□□□□ -1.12
VPS4B-205ENST00000591383 SYNE4Q8N205 404 aa8.05□□□□□ -1.12
VPS4B-205ENST00000591383 RPGRQ92834 1020 aaKnown RBP8.05□□□□□ -1.12
VPS4B-205ENST00000591383 FAM89AQ96GI7 184 aa8.05□□□□□ -1.12
VPS4B-205ENST00000591383 SLC4A5Q9BY07 1137 aa8.05□□□□□ -1.12
VPS4B-205ENST00000591383 C9orf78Q9NZ63 289 aaPredicted RBP8.05□□□□□ -1.12
VPS4B-205ENST00000591383 ARFGEF1Q9Y6D6 1849 aa8.05□□□□□ -1.12
VPS4B-205ENST00000591383 TAF1P21675 1872 aa8.04□□□□□ -1.12
VPS4B-205ENST00000591383 GRM8O00222 908 aa8.04□□□□□ -1.12
VPS4B-205ENST00000591383 ALDH1L1O75891 902 aa8.04□□□□□ -1.12
VPS4B-205ENST00000591383 PCCAP05165 728 aaPredicted RBP8.04□□□□□ -1.12
VPS4B-205ENST00000591383 DPEP1P16444 411 aa8.04□□□□□ -1.12
VPS4B-205ENST00000591383 PDE6BP35913 854 aa8.04□□□□□ -1.12
VPS4B-205ENST00000591383 RRP1P56182 461 aaKnown RBP8.04□□□□□ -1.12
VPS4B-205ENST00000591383 SAMD7Q7Z3H4 446 aa8.04□□□□□ -1.12
VPS4B-205ENST00000591383 DZIP1LQ8IYY4 767 aaKnown RBP8.04□□□□□ -1.12
VPS4B-205ENST00000591383 TMEM57Q8N5G2 664 aa8.04□□□□□ -1.12
VPS4B-205ENST00000591383 ZBTB38Q8NAP3 1195 aaPredicted RBP8.04□□□□□ -1.12
VPS4B-205ENST00000591383 PANK1Q8TE04 598 aa8.04□□□□□ -1.12
VPS4B-205ENST00000591383 CCDC85AQ96PX6 553 aaPredicted RBP8.04□□□□□ -1.12
VPS4B-205ENST00000591383 CHMP3Q9Y3E7 222 aa8.04□□□□□ -1.12
VPS4B-205ENST00000591383 CD2APQ9Y5K6 639 aa8.04□□□□□ -1.12
VPS4B-205ENST00000591383 COL4A1P02462 1669 aa8.04□□□□□ -1.12
VPS4B-205ENST00000591383 LRRC37AA6NMS7 1700 aa8.03□□□□□ -1.12
VPS4B-205ENST00000591383 A0A1B0GUL6 1792 aa8.03□□□□□ -1.12
VPS4B-205ENST00000591383 A0A0G2JLW4 131 aa8.03□□□□□ -1.12
VPS4B-205ENST00000591383 H0YIN7 160 aa8.03□□□□□ -1.12
VPS4B-205ENST00000591383 ARHGAP33O14559 1287 aa8.03□□□□□ -1.12
VPS4B-205ENST00000591383 RLBP1P12271 317 aa8.03□□□□□ -1.12
VPS4B-205ENST00000591383 CTSWP56202 376 aa8.03□□□□□ -1.12
VPS4B-205ENST00000591383 TRIM28Q13263 835 aaKnown RBP8.03□□□□□ -1.12
VPS4B-205ENST00000591383 SEMA3FQ13275 785 aa8.03□□□□□ -1.12
VPS4B-205ENST00000591383 POTEEQ6S8J3 1075 aa8.03□□□□□ -1.12
VPS4B-205ENST00000591383 ARHGAP45Q92619 1136 aa8.03□□□□□ -1.12
VPS4B-205ENST00000591383 ZNF622Q969S3 477 aaKnown RBP eCLIP8.03□□□□□ -1.12
VPS4B-205ENST00000591383 BRIP1Q9BX63 1249 aa8.03□□□□□ -1.12
VPS4B-205ENST00000591383 SLX4Q8IY92 1834 aa8.03□□□□□ -1.12
VPS4B-205ENST00000591383 CDHR2Q9BYE9 1310 aa8.03□□□□□ -1.12
VPS4B-205ENST00000591383 ATG7O95352 703 aa8.02□□□□□ -1.13
VPS4B-205ENST00000591383 UBTFL1P0CB47 393 aaPredicted RBP8.02□□□□□ -1.13
VPS4B-205ENST00000591383 HSP90B1P14625 803 aaKnown RBP8.02□□□□□ -1.13
VPS4B-205ENST00000591383 DMRTA1Q5VZB9 504 aa8.02□□□□□ -1.13
VPS4B-205ENST00000591383 NLRP3Q96P20 1036 aa8.02□□□□□ -1.13
VPS4B-205ENST00000591383 MEIS3Q99687 375 aa8.02□□□□□ -1.13
VPS4B-205ENST00000591383 SYT17Q9BSW7 474 aa8.02□□□□□ -1.13
VPS4B-205ENST00000591383 MAFBQ9Y5Q3 323 aaPredicted RBP8.02□□□□□ -1.13
VPS4B-205ENST00000591383 TIAM2Q8IVF5 1701 aa8.01□□□□□ -1.13
VPS4B-205ENST00000591383 PDE8AO60658 829 aa8.01□□□□□ -1.13
VPS4B-205ENST00000591383 CENPBP07199 599 aaPredicted RBP8.01□□□□□ -1.13
VPS4B-205ENST00000591383 NPR1P16066 1061 aa8.01□□□□□ -1.13
VPS4B-205ENST00000591383 CCDC152Q4G0S7 254 aa8.01□□□□□ -1.13
VPS4B-205ENST00000591383 C20orf194Q5TEA3 1177 aa8.01□□□□□ -1.13
VPS4B-205ENST00000591383 INTS3Q68E01 1043 aaKnown RBP8.01□□□□□ -1.13
VPS4B-205ENST00000591383 PRPF40BQ6NWY9 871 aaKnown RBP8.01□□□□□ -1.13
VPS4B-205ENST00000591383 TBC1D9Q6ZT07 1266 aa8.01□□□□□ -1.13
VPS4B-205ENST00000591383 DDX46Q7L014 1031 aaKnown RBP8.01□□□□□ -1.13
VPS4B-205ENST00000591383 RETREG3Q86VR2 466 aa8.01□□□□□ -1.13
VPS4B-205ENST00000591383 SUCLG2Q96I99 432 aa8.01□□□□□ -1.13
VPS4B-205ENST00000591383 BCS1LQ9Y276 419 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms