RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 COL1A1P02452 1464 aaPredicted RBP22.59■■□□□ 1.21
VAT1-208ENST00000590924 IL1R1P14778 569 aa22.58■■□□□ 1.21
VAT1-208ENST00000590924 TAF7LQ5H9L4 462 aa22.58■■□□□ 1.21
VAT1-208ENST00000590924 ZNF804AQ7Z570 1209 aa22.58■■□□□ 1.21
VAT1-208ENST00000590924 APOBEC3FQ8IUX4 373 aaKnown RBP22.58■■□□□ 1.21
VAT1-208ENST00000590924 REM2Q8IYK8 340 aaPredicted RBP22.58■■□□□ 1.21
VAT1-208ENST00000590924 ZNF594Q96JF6 807 aaPredicted RBP22.58■■□□□ 1.21
VAT1-208ENST00000590924 PRAMEF18Q5VWM3 479 aa22.57■■□□□ 1.2
VAT1-208ENST00000590924 CERS5Q8N5B7 392 aa22.57■■□□□ 1.2
VAT1-208ENST00000590924 ARHGAP45Q92619 1136 aa22.57■■□□□ 1.2
VAT1-208ENST00000590924 CSRNP1Q96S65 589 aa22.57■■□□□ 1.2
VAT1-208ENST00000590924 CNNM1Q9NRU3 951 aa22.57■■□□□ 1.2
VAT1-208ENST00000590924 MYH13Q9UKX3 1938 aa22.57■■□□□ 1.2
VAT1-208ENST00000590924 UTYO14607 1347 aa22.57■■□□□ 1.2
VAT1-208ENST00000590924 KIF16BQ96L93 1317 aa22.57■■□□□ 1.2
VAT1-208ENST00000590924 NF2P35240 595 aa22.56■■□□□ 1.2
VAT1-208ENST00000590924 FKBP1AP62942 108 aaKnown RBP22.56■■□□□ 1.2
VAT1-208ENST00000590924 MOB2Q70IA6 237 aa22.56■■□□□ 1.2
VAT1-208ENST00000590924 KAZALD1Q96I82 304 aa22.56■■□□□ 1.2
VAT1-208ENST00000590924 RNF186Q9NXI6 227 aa22.56■■□□□ 1.2
VAT1-208ENST00000590924 IPO8O15397 1037 aaKnown RBP22.55■■□□□ 1.2
VAT1-208ENST00000590924 MTMR14Q8NCE2 650 aa22.55■■□□□ 1.2
VAT1-208ENST00000590924 SUCLG2Q96I99 432 aa22.55■■□□□ 1.2
VAT1-208ENST00000590924 MCOLN1Q9GZU1 580 aa22.55■■□□□ 1.2
VAT1-208ENST00000590924 UBE2Q2LH0YL09 131 aa22.54■■□□□ 1.2
VAT1-208ENST00000590924 TRPA1O75762 1119 aa22.54■■□□□ 1.2
VAT1-208ENST00000590924 NBPF7P0C2Y1 421 aaPredicted RBP22.54■■□□□ 1.2
VAT1-208ENST00000590924 RCAN3Q9UKA8 241 aa22.54■■□□□ 1.2
VAT1-208ENST00000590924 BCAR3O75815 825 aa22.53■■□□□ 1.2
VAT1-208ENST00000590924 DLGAP5Q15398 846 aa22.53■■□□□ 1.2
VAT1-208ENST00000590924 API5Q9BZZ5 524 aaKnown RBP22.53■■□□□ 1.2
VAT1-208ENST00000590924 NOB1Q9ULX3 412 aaKnown RBP22.53■■□□□ 1.2
VAT1-208ENST00000590924 PLIN1O60240 522 aa22.52■■□□□ 1.2
VAT1-208ENST00000590924 DGKZQ13574 1117 aa22.52■■□□□ 1.2
VAT1-208ENST00000590924 UBE4AQ14139 1066 aa22.52■■□□□ 1.2
VAT1-208ENST00000590924 TTLL12Q14166 644 aaPredicted RBP22.52■■□□□ 1.2
VAT1-208ENST00000590924 RABL6Q3YEC7 729 aaPredicted RBP22.52■■□□□ 1.2
VAT1-208ENST00000590924 CCDC85CA6NKD9 419 aa22.51■■□□□ 1.19
VAT1-208ENST00000590924 FAM205AQ6ZU69 1335 aa22.51■■□□□ 1.19
VAT1-208ENST00000590924 ARMC9Q7Z3E5 817 aa22.5■■□□□ 1.19
VAT1-208ENST00000590924 PUS3Q9BZE2 481 aaKnown RBP22.5■■□□□ 1.19
VAT1-208ENST00000590924 BICC1Q9H694 974 aaKnown RBP22.5■■□□□ 1.19
VAT1-208ENST00000590924 RIPOR2Q9Y4F9 1068 aa22.5■■□□□ 1.19
VAT1-208ENST00000590924 OTOFQ9HC10 1997 aa22.5■■□□□ 1.19
VAT1-208ENST00000590924 SPDYE2BA6NHP3 402 aa22.49■■□□□ 1.19
VAT1-208ENST00000590924 F8W031 263 aaPredicted RBP22.49■■□□□ 1.19
VAT1-208ENST00000590924 SPDYE6P0CI01 402 aa22.49■■□□□ 1.19
VAT1-208ENST00000590924 CFAP100Q494V2 611 aa22.49■■□□□ 1.19
VAT1-208ENST00000590924 TDRD7Q8NHU6 1098 aaKnown RBP22.49■■□□□ 1.19
VAT1-208ENST00000590924 DEFB129Q9H1M3 183 aa22.49■■□□□ 1.19
VAT1-208ENST00000590924 PPP2R3BQ9Y5P8 575 aa22.49■■□□□ 1.19
VAT1-208ENST00000590924 MYO1BO43795 1136 aa22.48■■□□□ 1.19
VAT1-208ENST00000590924 JAG2Q9Y219 1238 aa22.48■■□□□ 1.19
VAT1-208ENST00000590924 PCDHAC2Q9Y5I4 1007 aa22.48■■□□□ 1.19
VAT1-208ENST00000590924 MROH5Q6ZUA9 1318 aa22.48■■□□□ 1.19
VAT1-208ENST00000590924 SSC5DA1L4H1 1573 aa22.47■■□□□ 1.19
VAT1-208ENST00000590924 LDLRAD1Q5T700 205 aa22.47■■□□□ 1.19
VAT1-208ENST00000590924 ZKSCAN2Q63HK3 967 aa22.47■■□□□ 1.19
VAT1-208ENST00000590924 ATF7IPQ6VMQ6 1270 aa22.47■■□□□ 1.19
VAT1-208ENST00000590924 ANKRD44Q8N8A2 993 aa22.47■■□□□ 1.19
VAT1-208ENST00000590924 HIBADHP31937 336 aaKnown RBP22.46■■□□□ 1.19
VAT1-208ENST00000590924 GYG1P46976 350 aa22.46■■□□□ 1.19
VAT1-208ENST00000590924 PTPN12Q05209 780 aaKnown RBP22.46■■□□□ 1.19
VAT1-208ENST00000590924 FRAT1Q92837 279 aaPredicted RBP22.46■■□□□ 1.19
VAT1-208ENST00000590924 FAM84BQ96KN1 310 aaPredicted RBP22.46■■□□□ 1.19
VAT1-208ENST00000590924 PRMT6Q96LA8 375 aaPredicted RBP22.46■■□□□ 1.19
VAT1-208ENST00000590924 ANGEL1Q9UNK9 670 aaKnown RBP22.46■■□□□ 1.19
VAT1-208ENST00000590924 TM4SF4P48230 202 aa22.45■■□□□ 1.18
VAT1-208ENST00000590924 RGS19P49795 217 aa22.45■■□□□ 1.18
VAT1-208ENST00000590924 PRKG1Q13976 671 aa22.45■■□□□ 1.18
VAT1-208ENST00000590924 MAP3K11Q16584 847 aa22.45■■□□□ 1.18
VAT1-208ENST00000590924 MFSD14BQ5SR56 506 aa22.45■■□□□ 1.18
VAT1-208ENST00000590924 CLRN2A0PK11 232 aa22.44■■□□□ 1.18
VAT1-208ENST00000590924 USP44Q9H0E7 712 aa22.44■■□□□ 1.18
VAT1-208ENST00000590924 AOX1Q06278 1338 aa22.43■■□□□ 1.18
VAT1-208ENST00000590924 MS4A1P11836 297 aa22.43■■□□□ 1.18
VAT1-208ENST00000590924 TRIM27P14373 513 aa22.43■■□□□ 1.18
VAT1-208ENST00000590924 SREBF2Q12772 1141 aa22.43■■□□□ 1.18
VAT1-208ENST00000590924 LRRC24Q50LG9 513 aa22.43■■□□□ 1.18
VAT1-208ENST00000590924 VGLL2Q8N8G2 317 aa22.43■■□□□ 1.18
VAT1-208ENST00000590924 SERPINA10Q9UK55 444 aa22.43■■□□□ 1.18
VAT1-208ENST00000590924 PPP1R12BO60237 982 aaPredicted RBP22.42■■□□□ 1.18
VAT1-208ENST00000590924 RBM5P52756 815 aaKnown RBP eCLIP22.42■■□□□ 1.18
VAT1-208ENST00000590924 METTL24Q5JXM2 366 aa22.42■■□□□ 1.18
VAT1-208ENST00000590924 FBXO33Q7Z6M2 555 aa22.42■■□□□ 1.18
VAT1-208ENST00000590924 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.42■■□□□ 1.18
VAT1-208ENST00000590924 VEZTQ9HBM0 779 aa22.42■■□□□ 1.18
VAT1-208ENST00000590924 TTF2Q9UNY4 1162 aaKnown RBP22.42■■□□□ 1.18
VAT1-208ENST00000590924 UNCXA6NJT0 531 aa22.41■■□□□ 1.18
VAT1-208ENST00000590924 PDE8BO95263 885 aa22.41■■□□□ 1.18
VAT1-208ENST00000590924 MKRN3Q13064 507 aaKnown RBP22.41■■□□□ 1.18
VAT1-208ENST00000590924 SUPT20HL1Q3ZLR7 823 aa22.41■■□□□ 1.18
VAT1-208ENST00000590924 NOM1Q5C9Z4 860 aaKnown RBP22.41■■□□□ 1.18
VAT1-208ENST00000590924 SPRYD7Q5W111 196 aa22.41■■□□□ 1.18
VAT1-208ENST00000590924 INTS3Q68E01 1043 aaKnown RBP22.41■■□□□ 1.18
VAT1-208ENST00000590924 CTU1Q7Z7A3 348 aaKnown RBP22.41■■□□□ 1.18
VAT1-208ENST00000590924 FZD1Q9UP38 647 aa22.41■■□□□ 1.18
VAT1-208ENST00000590924 TNFAIP1Q13829 316 aa22.4■■□□□ 1.18
VAT1-208ENST00000590924 SPDYE2Q495Y8 402 aa22.4■■□□□ 1.18
VAT1-208ENST00000590924 VPS37DQ86XT2 251 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms