RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 NIM1KQ8IY84 436 aa14.21□□□□□ -0.13
SMAD4-211ENST00000590499 GPC2Q8N158 579 aa14.21□□□□□ -0.13
SMAD4-211ENST00000590499 FBXW7Q969H0 707 aa14.21□□□□□ -0.13
SMAD4-211ENST00000590499 PODXL2Q9NZ53 605 aa14.21□□□□□ -0.13
SMAD4-211ENST00000590499 POLLQ9UGP5 575 aa14.21□□□□□ -0.13
SMAD4-211ENST00000590499 NSFL1CQ9UNZ2 370 aaKnown RBP14.21□□□□□ -0.13
SMAD4-211ENST00000590499 ADAMTSL1Q8N6G6 1762 aa14.21□□□□□ -0.13
SMAD4-211ENST00000590499 A0A1B0GUL6 1792 aa14.2□□□□□ -0.14
SMAD4-211ENST00000590499 GRM8O00222 908 aa14.2□□□□□ -0.14
SMAD4-211ENST00000590499 FOXO4P98177 505 aa14.2□□□□□ -0.14
SMAD4-211ENST00000590499 FAM161AQ3B820 660 aa14.2□□□□□ -0.14
SMAD4-211ENST00000590499 SLC4A10Q6U841 1118 aa14.2□□□□□ -0.14
SMAD4-211ENST00000590499 ANKRD18AQ8IVF6 992 aa14.2□□□□□ -0.14
SMAD4-211ENST00000590499 C16orf71Q8IYS4 520 aaPredicted RBP14.2□□□□□ -0.14
SMAD4-211ENST00000590499 TBC1D16Q8TBP0 767 aa14.2□□□□□ -0.14
SMAD4-211ENST00000590499 CDC5LQ99459 802 aaKnown RBP14.2□□□□□ -0.14
SMAD4-211ENST00000590499 SRCIN1Q9C0H9 1055 aa14.2□□□□□ -0.14
SMAD4-211ENST00000590499 SMC4Q9NTJ3 1288 aa14.2□□□□□ -0.14
SMAD4-211ENST00000590499 WBP1LQ9NX94 342 aa14.2□□□□□ -0.14
SMAD4-211ENST00000590499 UTYO14607 1347 aa14.19□□□□□ -0.14
SMAD4-211ENST00000590499 LCE2BO14633 110 aa14.19□□□□□ -0.14
SMAD4-211ENST00000590499 HSPA6P17066 643 aa14.19□□□□□ -0.14
SMAD4-211ENST00000590499 EIF6P56537 245 aaKnown RBP14.19□□□□□ -0.14
SMAD4-211ENST00000590499 HNRNPUQ00839 825 aaKnown RBP eCLIP14.19□□□□□ -0.14
SMAD4-211ENST00000590499 KCNC4Q03721 635 aa14.19□□□□□ -0.14
SMAD4-211ENST00000590499 FSTL1Q12841 308 aa14.19□□□□□ -0.14
SMAD4-211ENST00000590499 EPHA10Q5JZY3 1008 aa14.19□□□□□ -0.14
SMAD4-211ENST00000590499 ZFRQ96KR1 1074 aaKnown RBP14.19□□□□□ -0.14
SMAD4-211ENST00000590499 TSHZ2Q9NRE2 1034 aa14.19□□□□□ -0.14
SMAD4-211ENST00000590499 BSDC1Q9NW68 430 aaPredicted RBP14.19□□□□□ -0.14
SMAD4-211ENST00000590499 ZNRF3Q9ULT6 936 aa14.19□□□□□ -0.14
SMAD4-211ENST00000590499 SCN9AQ15858 1988 aa14.19□□□□□ -0.14
SMAD4-211ENST00000590499 IQCA1LA6NCM1 817 aa14.18□□□□□ -0.14
SMAD4-211ENST00000590499 YDJCA8MPS7 323 aa14.18□□□□□ -0.14
SMAD4-211ENST00000590499 ITGA6P23229 1130 aa14.18□□□□□ -0.14
SMAD4-211ENST00000590499 RARSP54136 660 aaKnown RBP14.18□□□□□ -0.14
SMAD4-211ENST00000590499 DDX12PQ92771 950 aa14.18□□□□□ -0.14
SMAD4-211ENST00000590499 KAZALD1Q96I82 304 aa14.18□□□□□ -0.14
SMAD4-211ENST00000590499 TAF1DQ9H5J8 278 aaPredicted RBP14.18□□□□□ -0.14
SMAD4-211ENST00000590499 PSME4Q14997 1843 aa14.18□□□□□ -0.14
SMAD4-211ENST00000590499 NBPF7P0C2Y1 421 aaPredicted RBP14.17□□□□□ -0.14
SMAD4-211ENST00000590499 SCNN1DP51172 638 aa14.17□□□□□ -0.14
SMAD4-211ENST00000590499 CXCL9Q07325 125 aa14.17□□□□□ -0.14
SMAD4-211ENST00000590499 WASHC4Q2M389 1173 aa14.17□□□□□ -0.14
SMAD4-211ENST00000590499 SMC1BQ8NDV3 1235 aa14.17□□□□□ -0.14
SMAD4-211ENST00000590499 GPR101Q96P66 508 aaPredicted RBP14.17□□□□□ -0.14
SMAD4-211ENST00000590499 EPAS1Q99814 870 aa14.17□□□□□ -0.14
SMAD4-211ENST00000590499 KIAA1468Q9P260 1216 aa14.17□□□□□ -0.14
SMAD4-211ENST00000590499 MINPP1Q9UNW1 487 aa14.17□□□□□ -0.14
SMAD4-211ENST00000590499 XDHP47989 1333 aa14.16□□□□□ -0.14
SMAD4-211ENST00000590499 C6orf229H3BNL8 230 aa14.16□□□□□ -0.14
SMAD4-211ENST00000590499 UFL1O94874 794 aa14.16□□□□□ -0.14
SMAD4-211ENST00000590499 EYA3Q99504 573 aa14.16□□□□□ -0.14
SMAD4-211ENST00000590499 C9orf78Q9NZ63 289 aaPredicted RBP14.16□□□□□ -0.14
SMAD4-211ENST00000590499 ANKIB1Q9P2G1 1089 aa14.16□□□□□ -0.14
SMAD4-211ENST00000590499 HACL1Q9UJ83 578 aa14.16□□□□□ -0.14
SMAD4-211ENST00000590499 GGA1Q9UJY5 639 aa14.16□□□□□ -0.14
SMAD4-211ENST00000590499 GJA3Q9Y6H8 435 aa14.16□□□□□ -0.14
SMAD4-211ENST00000590499 ZBED9Q6R2W3 1325 aa14.15□□□□□ -0.14
SMAD4-211ENST00000590499 SPDYE16A6NNV3 312 aaPredicted RBP14.15□□□□□ -0.14
SMAD4-211ENST00000590499 IGHMBP2P38935 993 aaKnown RBP14.15□□□□□ -0.14
SMAD4-211ENST00000590499 LMBR1LQ6UX01 489 aa14.15□□□□□ -0.14
SMAD4-211ENST00000590499 SUCLG2Q96I99 432 aa14.15□□□□□ -0.14
SMAD4-211ENST00000590499 DBNDD1Q9H9R9 158 aa14.15□□□□□ -0.14
SMAD4-211ENST00000590499 NOB1Q9ULX3 412 aaKnown RBP14.15□□□□□ -0.14
SMAD4-211ENST00000590499 ZNF646O15015 1829 aaPredicted RBP14.15□□□□□ -0.14
SMAD4-211ENST00000590499 ANKRD18BA2A2Z9 1011 aa14.14□□□□□ -0.15
SMAD4-211ENST00000590499 WTIPA6NIX2 430 aaPredicted RBP14.14□□□□□ -0.15
SMAD4-211ENST00000590499 ATP2B4P23634 1241 aa14.14□□□□□ -0.15
SMAD4-211ENST00000590499 EPHX2P34913 555 aa14.14□□□□□ -0.15
SMAD4-211ENST00000590499 RABL6Q3YEC7 729 aaPredicted RBP14.14□□□□□ -0.15
SMAD4-211ENST00000590499 CIAPIN1Q6FI81 312 aa14.14□□□□□ -0.15
SMAD4-211ENST00000590499 USP44Q9H0E7 712 aa14.14□□□□□ -0.15
SMAD4-211ENST00000590499 MED23Q9ULK4 1368 aa14.13□□□□□ -0.15
SMAD4-211ENST00000590499 ECE2O60344 883 aa14.13□□□□□ -0.15
SMAD4-211ENST00000590499 RAD17O75943 681 aa14.13□□□□□ -0.15
SMAD4-211ENST00000590499 IFIT5Q13325 482 aaKnown RBP14.13□□□□□ -0.15
SMAD4-211ENST00000590499 LAPTM4AQ15012 233 aa14.13□□□□□ -0.15
SMAD4-211ENST00000590499 LDHDQ86WU2 507 aa14.13□□□□□ -0.15
SMAD4-211ENST00000590499 ANKRD44Q8N8A2 993 aa14.13□□□□□ -0.15
SMAD4-211ENST00000590499 ZC3H12CQ9C0D7 883 aaKnown RBP14.13□□□□□ -0.15
SMAD4-211ENST00000590499 GPRC5DQ9NZD1 345 aa14.13□□□□□ -0.15
SMAD4-211ENST00000590499 ARIH1Q9Y4X5 557 aaPredicted RBP14.13□□□□□ -0.15
SMAD4-211ENST00000590499 PCNTO95613 3336 aa14.13□□□□□ -0.15
SMAD4-211ENST00000590499 KIF16BQ96L93 1317 aa14.13□□□□□ -0.15
SMAD4-211ENST00000590499 EPS15P42566 896 aa14.12□□□□□ -0.15
SMAD4-211ENST00000590499 GMPSP49915 693 aaPredicted RBP14.12□□□□□ -0.15
SMAD4-211ENST00000590499 CCT4P50991 539 aaKnown RBP14.12□□□□□ -0.15
SMAD4-211ENST00000590499 APLP1P51693 650 aa14.12□□□□□ -0.15
SMAD4-211ENST00000590499 TNIP1Q15025 636 aa14.12□□□□□ -0.15
SMAD4-211ENST00000590499 PNMA8AQ86V59 439 aaPredicted RBP14.12□□□□□ -0.15
SMAD4-211ENST00000590499 ARHGAP45Q92619 1136 aa14.12□□□□□ -0.15
SMAD4-211ENST00000590499 MPHOSPH8Q99549 860 aa14.12□□□□□ -0.15
SMAD4-211ENST00000590499 API5Q9BZZ5 524 aaKnown RBP14.12□□□□□ -0.15
SMAD4-211ENST00000590499 KCNQ5Q9NR82 932 aa14.12□□□□□ -0.15
SMAD4-211ENST00000590499 ZNF609O15014 1411 aa14.12□□□□□ -0.15
SMAD4-211ENST00000590499 PSMD14O00487 310 aa14.11□□□□□ -0.15
SMAD4-211ENST00000590499 LMOD1P29536 600 aaPredicted RBP14.11□□□□□ -0.15
SMAD4-211ENST00000590499 CHRNDQ07001 517 aa14.11□□□□□ -0.15
SMAD4-211ENST00000590499 ANKRD2Q9GZV1 360 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms