RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 SCNN1DP51172 638 aa20.67■□□□□ 0.9
LSM14A-208ENST00000590416 TTC39AQ5SRH9 613 aa20.67■□□□□ 0.9
LSM14A-208ENST00000590416 DACT2Q5SW24 774 aa20.67■□□□□ 0.9
LSM14A-208ENST00000590416 CCDC102BQ68D86 513 aa20.67■□□□□ 0.9
LSM14A-208ENST00000590416 DBNDD2Q9BQY9 259 aa20.67■□□□□ 0.9
LSM14A-208ENST00000590416 RWDD1Q9H446 243 aaPredicted RBP20.67■□□□□ 0.9
LSM14A-208ENST00000590416 ZBTB47Q9UFB7 747 aaPredicted RBP20.67■□□□□ 0.9
LSM14A-208ENST00000590416 IFIT2P09913 472 aaKnown RBP20.66■□□□□ 0.9
LSM14A-208ENST00000590416 EPS15P42566 896 aa20.66■□□□□ 0.9
LSM14A-208ENST00000590416 EAPPQ56P03 285 aaPredicted RBP20.66■□□□□ 0.9
LSM14A-208ENST00000590416 CCDC158Q5M9N0 1113 aa20.66■□□□□ 0.9
LSM14A-208ENST00000590416 MICALL2Q8IY33 904 aa20.66■□□□□ 0.9
LSM14A-208ENST00000590416 AGBL3Q8NEM8 1001 aa20.66■□□□□ 0.9
LSM14A-208ENST00000590416 GPRC5DQ9NZD1 345 aa20.66■□□□□ 0.9
LSM14A-208ENST00000590416 CNOT7Q9UIV1 285 aaKnown RBP20.66■□□□□ 0.9
LSM14A-208ENST00000590416 MYO3BQ8WXR4 1341 aa20.66■□□□□ 0.9
LSM14A-208ENST00000590416 POTECB2RU33 542 aa20.65■□□□□ 0.9
LSM14A-208ENST00000590416 H7C1D1 291 aa20.65■□□□□ 0.9
LSM14A-208ENST00000590416 SMARCA5O60264 1052 aaPredicted RBP20.65■□□□□ 0.9
LSM14A-208ENST00000590416 EPHX2P34913 555 aa20.65■□□□□ 0.9
LSM14A-208ENST00000590416 HDAC1Q13547 482 aaPredicted RBP20.65■□□□□ 0.9
LSM14A-208ENST00000590416 DPF2Q92785 391 aa20.65■□□□□ 0.9
LSM14A-208ENST00000590416 EAF2Q96CJ1 260 aaPredicted RBP20.65■□□□□ 0.9
LSM14A-208ENST00000590416 DENND2AQ9ULE3 1009 aa20.65■□□□□ 0.9
LSM14A-208ENST00000590416 FAM205AQ6ZU69 1335 aa20.64■□□□□ 0.89
LSM14A-208ENST00000590416 F8W031 263 aaPredicted RBP20.64■□□□□ 0.89
LSM14A-208ENST00000590416 MFSD14BQ5SR56 506 aa20.64■□□□□ 0.89
LSM14A-208ENST00000590416 TAF1DQ9H5J8 278 aaPredicted RBP20.64■□□□□ 0.89
LSM14A-208ENST00000590416 TLR7Q9NYK1 1049 aaKnown RBP20.64■□□□□ 0.89
LSM14A-208ENST00000590416 SHTN1A0MZ66 631 aa20.63■□□□□ 0.89
LSM14A-208ENST00000590416 KIAA0825Q8IV33 1275 aa20.63■□□□□ 0.89
LSM14A-208ENST00000590416 ADARB2Q9NS39 739 aaKnown RBP20.63■□□□□ 0.89
LSM14A-208ENST00000590416 DBNLQ9UJU6 430 aaKnown RBP20.63■□□□□ 0.89
LSM14A-208ENST00000590416 HDAC9Q9UKV0 1011 aa20.63■□□□□ 0.89
LSM14A-208ENST00000590416 KIF3CO14782 793 aa20.62■□□□□ 0.89
LSM14A-208ENST00000590416 SEMA3EO15041 775 aa20.62■□□□□ 0.89
LSM14A-208ENST00000590416 USP17L8P0C7I0 530 aa20.62■□□□□ 0.89
LSM14A-208ENST00000590416 UQCRFS1P1P0C7P4 283 aa20.62■□□□□ 0.89
LSM14A-208ENST00000590416 RBM26Q5T8P6 1007 aaKnown RBP20.62■□□□□ 0.89
LSM14A-208ENST00000590416 OGFOD1Q8N543 542 aa20.62■□□□□ 0.89
LSM14A-208ENST00000590416 TBC1D22AQ8WUA7 517 aa20.62■□□□□ 0.89
LSM14A-208ENST00000590416 GCC1Q96CN9 775 aa20.62■□□□□ 0.89
LSM14A-208ENST00000590416 CLEC11AQ9Y240 323 aa20.62■□□□□ 0.89
LSM14A-208ENST00000590416 FKBP1AP62942 108 aaKnown RBP20.61■□□□□ 0.89
LSM14A-208ENST00000590416 RASGRF1Q13972 1273 aa20.61■□□□□ 0.89
LSM14A-208ENST00000590416 CERS5Q8N5B7 392 aa20.61■□□□□ 0.89
LSM14A-208ENST00000590416 WDR66Q8TBY9 1149 aa20.61■□□□□ 0.89
LSM14A-208ENST00000590416 COL1A1P02452 1464 aaPredicted RBP20.61■□□□□ 0.89
LSM14A-208ENST00000590416 ARID4AP29374 1257 aaPredicted RBP20.6■□□□□ 0.89
LSM14A-208ENST00000590416 TBC1D10BQ4KMP7 808 aaPredicted RBP20.6■□□□□ 0.89
LSM14A-208ENST00000590416 ANKRD45Q5TZF3 282 aa20.6■□□□□ 0.89
LSM14A-208ENST00000590416 SAMD7Q7Z3H4 446 aa20.6■□□□□ 0.89
LSM14A-208ENST00000590416 PNMA8AQ86V59 439 aaPredicted RBP20.6■□□□□ 0.89
LSM14A-208ENST00000590416 GMLQ99445 158 aa20.6■□□□□ 0.89
LSM14A-208ENST00000590416 IGHDP01880 384 aa20.59■□□□□ 0.89
LSM14A-208ENST00000590416 KIF4BQ2VIQ3 1234 aa20.59■□□□□ 0.89
LSM14A-208ENST00000590416 MCAMP43121 646 aa20.58■□□□□ 0.89
LSM14A-208ENST00000590416 USP50Q70EL3 339 aaPredicted RBP20.58■□□□□ 0.89
LSM14A-208ENST00000590416 SPATA5Q8NB90 893 aa20.58■□□□□ 0.89
LSM14A-208ENST00000590416 TRPM4Q8TD43 1214 aa20.58■□□□□ 0.89
LSM14A-208ENST00000590416 ABCF2Q9UG63 623 aa20.58■□□□□ 0.89
LSM14A-208ENST00000590416 TTF2Q9UNY4 1162 aaKnown RBP20.58■□□□□ 0.89
LSM14A-208ENST00000590416 RBM5P52756 815 aaKnown RBP eCLIP20.57■□□□□ 0.88
LSM14A-208ENST00000590416 B4GALNT3Q6L9W6 998 aa20.57■□□□□ 0.88
LSM14A-208ENST00000590416 PI16Q6UXB8 463 aa20.57■□□□□ 0.88
LSM14A-208ENST00000590416 ZGPATQ8N5A5 531 aaKnown RBP20.57■□□□□ 0.88
LSM14A-208ENST00000590416 MYOZ2Q9NPC6 264 aa20.57■□□□□ 0.88
LSM14A-208ENST00000590416 SNRKQ9NRH2 765 aa20.57■□□□□ 0.88
LSM14A-208ENST00000590416 HMG20BQ9P0W2 317 aa20.57■□□□□ 0.88
LSM14A-208ENST00000590416 POTEIP0CG38 1075 aa20.56■□□□□ 0.88
LSM14A-208ENST00000590416 POTEJP0CG39 1038 aa20.56■□□□□ 0.88
LSM14A-208ENST00000590416 ZNF280AP59817 542 aaPredicted RBP20.56■□□□□ 0.88
LSM14A-208ENST00000590416 SCARF1Q14162 830 aa20.56■□□□□ 0.88
LSM14A-208ENST00000590416 LDHDQ86WU2 507 aa20.56■□□□□ 0.88
LSM14A-208ENST00000590416 GPATCH3Q96I76 525 aa20.56■□□□□ 0.88
LSM14A-208ENST00000590416 AKAP11Q9UKA4 1901 aa20.56■□□□□ 0.88
LSM14A-208ENST00000590416 MAST3O60307 1309 aa20.55■□□□□ 0.88
LSM14A-208ENST00000590416 PDS5AQ29RF7 1337 aaKnown RBP20.55■□□□□ 0.88
LSM14A-208ENST00000590416 TOMM70O94826 608 aa20.55■□□□□ 0.88
LSM14A-208ENST00000590416 LDHBP07195 334 aaKnown RBP20.55■□□□□ 0.88
LSM14A-208ENST00000590416 EGFRP00533 1210 aa20.54■□□□□ 0.88
LSM14A-208ENST00000590416 MMP14P50281 582 aa20.54■□□□□ 0.88
LSM14A-208ENST00000590416 DLGAP5Q15398 846 aa20.54■□□□□ 0.88
LSM14A-208ENST00000590416 GRIK5Q16478 980 aa20.54■□□□□ 0.88
LSM14A-208ENST00000590416 SPTY2D1Q68D10 685 aaPredicted RBP20.54■□□□□ 0.88
LSM14A-208ENST00000590416 SUGT1Q9Y2Z0 365 aa20.54■□□□□ 0.88
LSM14A-208ENST00000590416 ADAMTSL1Q8N6G6 1762 aa20.54■□□□□ 0.88
LSM14A-208ENST00000590416 SALL1Q9NSC2 1324 aa20.53■□□□□ 0.88
LSM14A-208ENST00000590416 PRDX5P30044 214 aa20.53■□□□□ 0.88
LSM14A-208ENST00000590416 ZAP70P43403 619 aa20.53■□□□□ 0.88
LSM14A-208ENST00000590416 CFAP100Q494V2 611 aa20.53■□□□□ 0.88
LSM14A-208ENST00000590416 ERICH6Q7L0X2 663 aa20.53■□□□□ 0.88
LSM14A-208ENST00000590416 DZIP1Q86YF9 867 aaKnown RBP20.53■□□□□ 0.88
LSM14A-208ENST00000590416 SMC5Q8IY18 1101 aa20.53■□□□□ 0.88
LSM14A-208ENST00000590416 SMC1BQ8NDV3 1235 aa20.53■□□□□ 0.88
LSM14A-208ENST00000590416 RBM46Q8TBY0 533 aaKnown RBP20.53■□□□□ 0.88
LSM14A-208ENST00000590416 ZNF512BQ96KM6 892 aaPredicted RBP20.53■□□□□ 0.88
LSM14A-208ENST00000590416 DNAJC2Q99543 621 aaKnown RBP20.53■□□□□ 0.88
LSM14A-208ENST00000590416 ZBTB22O15209 634 aa20.52■□□□□ 0.88
LSM14A-208ENST00000590416 CRKP46108 304 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms