RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 AOX1Q06278 1338 aa14.75□□□□□ -0.05
APOC1-206ENST00000590334 MX1P20591 662 aa14.75□□□□□ -0.05
APOC1-206ENST00000590334 PDE4AP27815 886 aa14.75□□□□□ -0.05
APOC1-206ENST00000590334 RASGRF1Q13972 1273 aa14.75□□□□□ -0.05
APOC1-206ENST00000590334 TTC39AQ5SRH9 613 aa14.75□□□□□ -0.05
APOC1-206ENST00000590334 OTUD7AQ8TE49 926 aaPredicted RBP14.75□□□□□ -0.05
APOC1-206ENST00000590334 GPATCH3Q96I76 525 aa14.75□□□□□ -0.05
APOC1-206ENST00000590334 OSBPL3Q9H4L5 887 aa14.75□□□□□ -0.05
APOC1-206ENST00000590334 DENND2AQ9ULE3 1009 aa14.75□□□□□ -0.05
APOC1-206ENST00000590334 USP17L3A6NCW0 530 aa14.74□□□□□ -0.05
APOC1-206ENST00000590334 USP17L4A6NCW7 530 aa14.74□□□□□ -0.05
APOC1-206ENST00000590334 MCAMP43121 646 aa14.74□□□□□ -0.05
APOC1-206ENST00000590334 PDE1AP54750 535 aa14.74□□□□□ -0.05
APOC1-206ENST00000590334 FKBP1AP62942 108 aaKnown RBP14.74□□□□□ -0.05
APOC1-206ENST00000590334 CXCL9Q07325 125 aa14.74□□□□□ -0.05
APOC1-206ENST00000590334 SCARF1Q14162 830 aa14.74□□□□□ -0.05
APOC1-206ENST00000590334 STRIP1Q5VSL9 837 aa14.74□□□□□ -0.05
APOC1-206ENST00000590334 USP17L1Q7RTZ2 530 aa14.74□□□□□ -0.05
APOC1-206ENST00000590334 PLEKHM2Q8IWE5 1019 aa14.74□□□□□ -0.05
APOC1-206ENST00000590334 KCNQ5Q9NR82 932 aa14.74□□□□□ -0.05
APOC1-206ENST00000590334 HMG20BQ9P0W2 317 aa14.74□□□□□ -0.05
APOC1-206ENST00000590334 IQSEC3Q9UPP2 1182 aaPredicted RBP14.74□□□□□ -0.05
APOC1-206ENST00000590334 SALL1Q9NSC2 1324 aa14.73□□□□□ -0.05
APOC1-206ENST00000590334 WDR90Q96KV7 1748 aa14.73□□□□□ -0.05
APOC1-206ENST00000590334 VIL1P09327 827 aaKnown RBP14.73□□□□□ -0.05
APOC1-206ENST00000590334 EIF6P56537 245 aaKnown RBP14.73□□□□□ -0.05
APOC1-206ENST00000590334 TNIP1Q15025 636 aa14.73□□□□□ -0.05
APOC1-206ENST00000590334 DACT2Q5SW24 774 aa14.73□□□□□ -0.05
APOC1-206ENST00000590334 TTLL5Q6EMB2 1281 aa14.73□□□□□ -0.05
APOC1-206ENST00000590334 SPATA5Q8NB90 893 aa14.73□□□□□ -0.05
APOC1-206ENST00000590334 PI4K2BQ8TCG2 481 aa14.73□□□□□ -0.05
APOC1-206ENST00000590334 BCL11AQ9H165 835 aa14.73□□□□□ -0.05
APOC1-206ENST00000590334 SCN4AP35499 1836 aa14.73□□□□□ -0.05
APOC1-206ENST00000590334 ZNF541Q9H0D2 1346 aa14.72□□□□□ -0.05
APOC1-206ENST00000590334 FRAT2O75474 233 aaPredicted RBP14.72□□□□□ -0.05
APOC1-206ENST00000590334 RAD17O75943 681 aa14.72□□□□□ -0.05
APOC1-206ENST00000590334 GTF2IP78347 998 aa14.72□□□□□ -0.05
APOC1-206ENST00000590334 CIAPIN1Q6FI81 312 aa14.72□□□□□ -0.05
APOC1-206ENST00000590334 WDR66Q8TBY9 1149 aa14.72□□□□□ -0.05
APOC1-206ENST00000590334 HAUS7Q99871 368 aa14.72□□□□□ -0.05
APOC1-206ENST00000590334 ECM29Q5VYK3 1845 aa14.71□□□□□ -0.05
APOC1-206ENST00000590334 MYH2Q9UKX2 1941 aa14.71□□□□□ -0.05
APOC1-206ENST00000590334 PSMD14O00487 310 aa14.71□□□□□ -0.05
APOC1-206ENST00000590334 ERC2O15083 957 aa14.71□□□□□ -0.05
APOC1-206ENST00000590334 GLRX3O76003 335 aaKnown RBP14.71□□□□□ -0.05
APOC1-206ENST00000590334 PI16Q6UXB8 463 aa14.71□□□□□ -0.05
APOC1-206ENST00000590334 GPC2Q8N158 579 aa14.71□□□□□ -0.05
APOC1-206ENST00000590334 TBC1D22AQ8WUA7 517 aa14.71□□□□□ -0.05
APOC1-206ENST00000590334 MYO3BQ8WXR4 1341 aa14.7□□□□□ -0.06
APOC1-206ENST00000590334 IGSF3O75054 1194 aa14.7□□□□□ -0.06
APOC1-206ENST00000590334 CYP2E1P05181 493 aaPredicted RBP14.7□□□□□ -0.06
APOC1-206ENST00000590334 ZAP70P43403 619 aa14.7□□□□□ -0.06
APOC1-206ENST00000590334 TSHZ3Q63HK5 1081 aa14.7□□□□□ -0.06
APOC1-206ENST00000590334 RSBN1LQ6PCB5 846 aaPredicted RBP14.7□□□□□ -0.06
APOC1-206ENST00000590334 CERS5Q8N5B7 392 aa14.7□□□□□ -0.06
APOC1-206ENST00000590334 GMLQ99445 158 aa14.7□□□□□ -0.06
APOC1-206ENST00000590334 SUGT1Q9Y2Z0 365 aa14.7□□□□□ -0.06
APOC1-206ENST00000590334 ADAMTSL1Q8N6G6 1762 aa14.7□□□□□ -0.06
APOC1-206ENST00000590334 GLTPD2A6NH11 291 aa14.69□□□□□ -0.06
APOC1-206ENST00000590334 RPS12P25398 132 aaKnown RBP14.69□□□□□ -0.06
APOC1-206ENST00000590334 CHAF1AQ13111 956 aaPredicted RBP14.69□□□□□ -0.06
APOC1-206ENST00000590334 MFSD14BQ5SR56 506 aa14.69□□□□□ -0.06
APOC1-206ENST00000590334 ZGPATQ8N5A5 531 aaKnown RBP14.69□□□□□ -0.06
APOC1-206ENST00000590334 AGBL3Q8NEM8 1001 aa14.69□□□□□ -0.06
APOC1-206ENST00000590334 BOLA2Q9H3K6 86 aa14.69□□□□□ -0.06
APOC1-206ENST00000590334 SNRKQ9NRH2 765 aa14.69□□□□□ -0.06
APOC1-206ENST00000590334 MMP14P50281 582 aa14.68□□□□□ -0.06
APOC1-206ENST00000590334 TTF1Q15361 905 aaPredicted RBP14.68□□□□□ -0.06
APOC1-206ENST00000590334 DPY19L2Q6NUT2 758 aa14.68□□□□□ -0.06
APOC1-206ENST00000590334 DPF2Q92785 391 aa14.68□□□□□ -0.06
APOC1-206ENST00000590334 FBXW7Q969H0 707 aa14.68□□□□□ -0.06
APOC1-206ENST00000590334 PAG1Q9NWQ8 432 aa14.68□□□□□ -0.06
APOC1-206ENST00000590334 JAG2Q9Y219 1238 aa14.68□□□□□ -0.06
APOC1-206ENST00000590334 SPTY2D1Q68D10 685 aaPredicted RBP14.67□□□□□ -0.06
APOC1-206ENST00000590334 L3MBTL3Q96JM7 780 aaPredicted RBP14.67□□□□□ -0.06
APOC1-206ENST00000590334 MXD3Q9BW11 206 aa14.67□□□□□ -0.06
APOC1-206ENST00000590334 NDUFB9Q9Y6M9 179 aa14.67□□□□□ -0.06
APOC1-206ENST00000590334 GOLIM4O00461 696 aa14.66□□□□□ -0.06
APOC1-206ENST00000590334 DDNO94850 711 aaPredicted RBP14.66□□□□□ -0.06
APOC1-206ENST00000590334 GRIK5Q16478 980 aa14.66□□□□□ -0.06
APOC1-206ENST00000590334 TTC22Q5TAA0 569 aa14.66□□□□□ -0.06
APOC1-206ENST00000590334 TMED8Q6PL24 325 aaPredicted RBP14.66□□□□□ -0.06
APOC1-206ENST00000590334 TBC1D9Q6ZT07 1266 aa14.66□□□□□ -0.06
APOC1-206ENST00000590334 SKAP1Q86WV1 359 aa14.66□□□□□ -0.06
APOC1-206ENST00000590334 DNAJC2Q99543 621 aaKnown RBP14.66□□□□□ -0.06
APOC1-206ENST00000590334 ANTXR1Q9H6X2 564 aa14.66□□□□□ -0.06
APOC1-206ENST00000590334 PIH1D3Q9NQM4 214 aaKnown RBP14.66□□□□□ -0.06
APOC1-206ENST00000590334 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
APOC1-206ENST00000590334 GJA3Q9Y6H8 435 aa14.66□□□□□ -0.06
APOC1-206ENST00000590334 CDK5RAP2Q96SN8 1893 aa14.65□□□□□ -0.06
APOC1-206ENST00000590334 FOCADQ5VW36 1801 aa14.65□□□□□ -0.06
APOC1-206ENST00000590334 LDHBP07195 334 aaKnown RBP14.65□□□□□ -0.06
APOC1-206ENST00000590334 PRDX5P30044 214 aa14.65□□□□□ -0.06
APOC1-206ENST00000590334 GMPSP49915 693 aaPredicted RBP14.65□□□□□ -0.06
APOC1-206ENST00000590334 SCNN1DP51172 638 aa14.65□□□□□ -0.06
APOC1-206ENST00000590334 TICAM2Q86XR7 235 aa14.65□□□□□ -0.06
APOC1-206ENST00000590334 EDC3Q96F86 508 aaKnown RBP14.65□□□□□ -0.06
APOC1-206ENST00000590334 MRIQ9BWK5 157 aa14.65□□□□□ -0.06
APOC1-206ENST00000590334 ABCF2Q9UG63 623 aa14.65□□□□□ -0.06
APOC1-206ENST00000590334 MAST3O60307 1309 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms