RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 IQSEC3Q9UPP2 1182 aaPredicted RBP26.87■■□□□ 1.89
ATG4D-209ENST00000588857 DPP8Q6V1X1 898 aaPredicted RBP26.86■■□□□ 1.89
ATG4D-209ENST00000588857 KIAA1211Q6ZU35 1233 aa26.86■■□□□ 1.89
ATG4D-209ENST00000588857 ZNF804AQ7Z570 1209 aa26.86■■□□□ 1.89
ATG4D-209ENST00000588857 TXNRD3Q86VQ6 643 aa26.86■■□□□ 1.89
ATG4D-209ENST00000588857 ANO2Q9NQ90 1003 aa26.86■■□□□ 1.89
ATG4D-209ENST00000588857 POLLQ9UGP5 575 aa26.86■■□□□ 1.89
ATG4D-209ENST00000588857 RAD50Q92878 1312 aa26.86■■□□□ 1.89
ATG4D-209ENST00000588857 DOCK2Q92608 1830 aa26.85■■□□□ 1.89
ATG4D-209ENST00000588857 RNF113AO15541 343 aaKnown RBP26.85■■□□□ 1.89
ATG4D-209ENST00000588857 ANP32AP39687 249 aaKnown RBP26.85■■□□□ 1.89
ATG4D-209ENST00000588857 ZFYP08048 801 aaPredicted RBP26.84■■□□□ 1.89
ATG4D-209ENST00000588857 ZSCAN25Q6NSZ9 544 aa26.84■■□□□ 1.89
ATG4D-209ENST00000588857 USP26Q9BXU7 913 aa26.84■■□□□ 1.89
ATG4D-209ENST00000588857 PIH1D3Q9NQM4 214 aaKnown RBP26.84■■□□□ 1.89
ATG4D-209ENST00000588857 A0A0D9SFI3 127 aa26.84■■□□□ 1.89
ATG4D-209ENST00000588857 WASHC4Q2M389 1173 aa26.84■■□□□ 1.89
ATG4D-209ENST00000588857 OLFM4Q6UX06 510 aa26.84■■□□□ 1.89
ATG4D-209ENST00000588857 TTLL6Q8N841 843 aa26.84■■□□□ 1.89
ATG4D-209ENST00000588857 GPR101Q96P66 508 aaPredicted RBP26.84■■□□□ 1.89
ATG4D-209ENST00000588857 IL25Q9H293 177 aa26.84■■□□□ 1.89
ATG4D-209ENST00000588857 MED23Q9ULK4 1368 aa26.83■■□□□ 1.89
ATG4D-209ENST00000588857 PDS5AQ29RF7 1337 aaKnown RBP26.82■■□□□ 1.88
ATG4D-209ENST00000588857 IDH1O75874 414 aaKnown RBP26.82■■□□□ 1.88
ATG4D-209ENST00000588857 RBM25P49756 843 aaKnown RBP26.82■■□□□ 1.88
ATG4D-209ENST00000588857 CC2D2BQ6DHV5 1058 aa26.82■■□□□ 1.88
ATG4D-209ENST00000588857 ZNF219Q9P2Y4 722 aaPredicted RBP26.82■■□□□ 1.88
ATG4D-209ENST00000588857 ZBTB22O15209 634 aa26.81■■□□□ 1.88
ATG4D-209ENST00000588857 MCMDC2Q4G0Z9 681 aa26.81■■□□□ 1.88
ATG4D-209ENST00000588857 HELLSQ9NRZ9 838 aa26.81■■□□□ 1.88
ATG4D-209ENST00000588857 EPB41L2O43491 1005 aaKnown RBP26.8■■□□□ 1.88
ATG4D-209ENST00000588857 MAP3K12Q12852 859 aa26.8■■□□□ 1.88
ATG4D-209ENST00000588857 DUOX1Q9NRD9 1551 aa26.8■■□□□ 1.88
ATG4D-209ENST00000588857 COL1A1P02452 1464 aaPredicted RBP26.8■■□□□ 1.88
ATG4D-209ENST00000588857 ZMYM1Q5SVZ6 1142 aa26.8■■□□□ 1.88
ATG4D-209ENST00000588857 SLC9C2Q5TAH2 1124 aa26.8■■□□□ 1.88
ATG4D-209ENST00000588857 ARHGAP27Q6ZUM4 889 aa26.8■■□□□ 1.88
ATG4D-209ENST00000588857 C7orf43Q8WVR3 580 aa26.8■■□□□ 1.88
ATG4D-209ENST00000588857 EYA3Q99504 573 aa26.8■■□□□ 1.88
ATG4D-209ENST00000588857 ZC3H12CQ9C0D7 883 aaKnown RBP26.8■■□□□ 1.88
ATG4D-209ENST00000588857 LRP2BPQ9P2M1 347 aa26.8■■□□□ 1.88
ATG4D-209ENST00000588857 CHGBP05060 677 aa26.79■■□□□ 1.88
ATG4D-209ENST00000588857 ZNF784Q8NCA9 323 aaPredicted RBP26.79■■□□□ 1.88
ATG4D-209ENST00000588857 MCCP23508 829 aa26.78■■□□□ 1.88
ATG4D-209ENST00000588857 TDRD7Q8NHU6 1098 aaKnown RBP26.78■■□□□ 1.88
ATG4D-209ENST00000588857 ABCF2Q9UG63 623 aa26.78■■□□□ 1.88
ATG4D-209ENST00000588857 CHD4Q14839 1912 aa26.78■■□□□ 1.88
ATG4D-209ENST00000588857 CHAF1AQ13111 956 aaPredicted RBP26.77■■□□□ 1.88
ATG4D-209ENST00000588857 GRIPAP1Q4V328 841 aa26.77■■□□□ 1.88
ATG4D-209ENST00000588857 LSG1Q9H089 658 aaKnown RBP26.77■■□□□ 1.88
ATG4D-209ENST00000588857 CD209Q9NNX6 404 aa26.77■■□□□ 1.88
ATG4D-209ENST00000588857 RIMBP2O15034 1052 aa26.76■■□□□ 1.87
ATG4D-209ENST00000588857 C21orf2O43822 256 aa26.76■■□□□ 1.87
ATG4D-209ENST00000588857 ADD2P35612 726 aa26.76■■□□□ 1.87
ATG4D-209ENST00000588857 SLFNL1Q499Z3 407 aa26.76■■□□□ 1.87
ATG4D-209ENST00000588857 APPBP2Q92624 585 aa26.76■■□□□ 1.87
ATG4D-209ENST00000588857 SEC62Q99442 399 aaKnown RBP26.76■■□□□ 1.87
ATG4D-209ENST00000588857 CCDC88AQ3V6T2 1871 aa26.76■■□□□ 1.87
ATG4D-209ENST00000588857 IL1R1P14778 569 aa26.75■■□□□ 1.87
ATG4D-209ENST00000588857 PDE6AP16499 860 aa26.75■■□□□ 1.87
ATG4D-209ENST00000588857 UBE3CQ15386 1083 aa26.75■■□□□ 1.87
ATG4D-209ENST00000588857 CCDC171Q6TFL3 1326 aa26.75■■□□□ 1.87
ATG4D-209ENST00000588857 BRCA1P38398 1863 aaKnown RBP26.75■■□□□ 1.87
ATG4D-209ENST00000588857 ZNF589Q86UQ0 364 aaPredicted RBP26.75■■□□□ 1.87
ATG4D-209ENST00000588857 COA1Q9GZY4 146 aa26.75■■□□□ 1.87
ATG4D-209ENST00000588857 G3V3G9 751 aa26.74■■□□□ 1.87
ATG4D-209ENST00000588857 DCAF8Q5TAQ9 597 aa26.74■■□□□ 1.87
ATG4D-209ENST00000588857 MAGEB6Q8N7X4 407 aa26.74■■□□□ 1.87
ATG4D-209ENST00000588857 WDR66Q8TBY9 1149 aa26.74■■□□□ 1.87
ATG4D-209ENST00000588857 RTFDC1Q9BY42 306 aaPredicted RBP26.74■■□□□ 1.87
ATG4D-209ENST00000588857 RAI14Q9P0K7 980 aa26.74■■□□□ 1.87
ATG4D-209ENST00000588857 MAST3O60307 1309 aa26.73■■□□□ 1.87
ATG4D-209ENST00000588857 ZNF532Q9HCE3 1301 aa26.73■■□□□ 1.87
ATG4D-209ENST00000588857 CCDC93Q567U6 631 aa26.73■■□□□ 1.87
ATG4D-209ENST00000588857 CCDC129Q6ZRS4 1044 aa26.73■■□□□ 1.87
ATG4D-209ENST00000588857 RTKN2Q8IZC4 609 aa26.73■■□□□ 1.87
ATG4D-209ENST00000588857 ZGPATQ8N5A5 531 aaKnown RBP26.73■■□□□ 1.87
ATG4D-209ENST00000588857 SUPT20HQ8NEM7 779 aa26.73■■□□□ 1.87
ATG4D-209ENST00000588857 OSBP2Q969R2 916 aa26.73■■□□□ 1.87
ATG4D-209ENST00000588857 PTH1RQ03431 593 aa26.72■■□□□ 1.87
ATG4D-209ENST00000588857 SOGA3Q5TF21 947 aa26.71■■□□□ 1.87
ATG4D-209ENST00000588857 SPTY2D1Q68D10 685 aaPredicted RBP26.71■■□□□ 1.87
ATG4D-209ENST00000588857 ERICH6Q7L0X2 663 aa26.71■■□□□ 1.87
ATG4D-209ENST00000588857 SALL1Q9NSC2 1324 aa26.71■■□□□ 1.87
ATG4D-209ENST00000588857 TCRBV5S4A2TA0A5A2 114 aa26.71■■□□□ 1.87
ATG4D-209ENST00000588857 M0R2C6 588 aa26.71■■□□□ 1.87
ATG4D-209ENST00000588857 JAG2Q9Y219 1238 aa26.71■■□□□ 1.87
ATG4D-209ENST00000588857 SNED1Q8TER0 1413 aa26.7■■□□□ 1.86
ATG4D-209ENST00000588857 MAP4K1Q92918 833 aa26.7■■□□□ 1.86
ATG4D-209ENST00000588857 PUS7LQ9H0K6 701 aaKnown RBP26.7■■□□□ 1.86
ATG4D-209ENST00000588857 MAST2Q6P0Q8 1798 aa26.69■■□□□ 1.86
ATG4D-209ENST00000588857 HSPA4P34932 840 aa26.69■■□□□ 1.86
ATG4D-209ENST00000588857 DDRGK1Q96HY6 314 aa26.69■■□□□ 1.86
ATG4D-209ENST00000588857 DOK7Q18PE1 504 aa26.68■■□□□ 1.86
ATG4D-209ENST00000588857 IGSF3O75054 1194 aa26.67■■□□□ 1.86
ATG4D-209ENST00000588857 RBM8AQ9Y5S9 174 aaKnown RBP26.67■■□□□ 1.86
ATG4D-209ENST00000588857 CYP7A1P22680 504 aa26.67■■□□□ 1.86
ATG4D-209ENST00000588857 ANAPC15P60006 121 aa26.67■■□□□ 1.86
ATG4D-209ENST00000588857 NAA16Q6N069 864 aaPredicted RBP26.67■■□□□ 1.86
ATG4D-209ENST00000588857 TMED8Q6PL24 325 aaPredicted RBP26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms