RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 KLHDC4Q8TBB5 520 aa18.06■□□□□ 0.48
DDX39A-208ENST00000588692 CDCA5Q96FF9 252 aa18.06■□□□□ 0.48
DDX39A-208ENST00000588692 FAM84BQ96KN1 310 aaPredicted RBP18.06■□□□□ 0.48
DDX39A-208ENST00000588692 WBP1LQ9NX94 342 aa18.06■□□□□ 0.48
DDX39A-208ENST00000588692 EYA2O00167 538 aa18.05■□□□□ 0.48
DDX39A-208ENST00000588692 GNAI3P08754 354 aa18.05■□□□□ 0.48
DDX39A-208ENST00000588692 TRIM27P14373 513 aa18.05■□□□□ 0.48
DDX39A-208ENST00000588692 GYG1P46976 350 aa18.05■□□□□ 0.48
DDX39A-208ENST00000588692 HUNKP57058 714 aa18.05■□□□□ 0.48
DDX39A-208ENST00000588692 PTPN12Q05209 780 aaKnown RBP18.05■□□□□ 0.48
DDX39A-208ENST00000588692 ATF7IPQ6VMQ6 1270 aa18.05■□□□□ 0.48
DDX39A-208ENST00000588692 ZBED3Q96IU2 234 aaPredicted RBP18.05■□□□□ 0.48
DDX39A-208ENST00000588692 LRRFIP2Q9Y608 721 aaKnown RBP18.05■□□□□ 0.48
DDX39A-208ENST00000588692 PAPPA2Q9BXP8 1791 aa18.04■□□□□ 0.48
DDX39A-208ENST00000588692 BCAR3O75815 825 aa18.04■□□□□ 0.48
DDX39A-208ENST00000588692 MAP2K2P36507 400 aa18.04■□□□□ 0.48
DDX39A-208ENST00000588692 GRM1Q13255 1194 aa18.04■□□□□ 0.48
DDX39A-208ENST00000588692 PUM3Q15397 648 aaKnown RBP18.04■□□□□ 0.48
DDX39A-208ENST00000588692 CAVIN4Q5BKX8 364 aa18.04■□□□□ 0.48
DDX39A-208ENST00000588692 VPS37DQ86XT2 251 aa18.04■□□□□ 0.48
DDX39A-208ENST00000588692 MTMR14Q8NCE2 650 aa18.04■□□□□ 0.48
DDX39A-208ENST00000588692 MEIS3Q99687 375 aa18.04■□□□□ 0.48
DDX39A-208ENST00000588692 CIAO1O76071 339 aa18.03■□□□□ 0.48
DDX39A-208ENST00000588692 FKBP1BP68106 108 aa18.03■□□□□ 0.48
DDX39A-208ENST00000588692 DLGAP5Q15398 846 aa18.03■□□□□ 0.48
DDX39A-208ENST00000588692 FBXO33Q7Z6M2 555 aa18.03■□□□□ 0.48
DDX39A-208ENST00000588692 APOBEC3FQ8IUX4 373 aaKnown RBP18.03■□□□□ 0.48
DDX39A-208ENST00000588692 FRAT1Q92837 279 aaPredicted RBP18.03■□□□□ 0.48
DDX39A-208ENST00000588692 COL1A1P02452 1464 aaPredicted RBP18.03■□□□□ 0.48
DDX39A-208ENST00000588692 FOXN1O15353 648 aa18.02■□□□□ 0.48
DDX39A-208ENST00000588692 IFIT1P09914 478 aaKnown RBP18.02■□□□□ 0.48
DDX39A-208ENST00000588692 CTCFP49711 727 aaPredicted RBP18.02■□□□□ 0.48
DDX39A-208ENST00000588692 MYH13Q9UKX3 1938 aa18.02■□□□□ 0.47
DDX39A-208ENST00000588692 FGFR2P21802 821 aa18.01■□□□□ 0.47
DDX39A-208ENST00000588692 NOGQ13253 232 aa18.01■□□□□ 0.47
DDX39A-208ENST00000588692 MFSD14BQ5SR56 506 aa18.01■□□□□ 0.47
DDX39A-208ENST00000588692 COL13A1Q5TAT6 717 aaPredicted RBP18.01■□□□□ 0.47
DDX39A-208ENST00000588692 ZKSCAN2Q63HK3 967 aa18.01■□□□□ 0.47
DDX39A-208ENST00000588692 JAG2Q9Y219 1238 aa18.01■□□□□ 0.47
DDX39A-208ENST00000588692 F8W031 263 aaPredicted RBP18.01■□□□□ 0.47
DDX39A-208ENST00000588692 IFFO2Q5TF58 517 aa18.01■□□□□ 0.47
DDX39A-208ENST00000588692 RGMBQ6NW40 437 aa18.01■□□□□ 0.47
DDX39A-208ENST00000588692 ATG9AQ7Z3C6 839 aa18.01■□□□□ 0.47
DDX39A-208ENST00000588692 LPIN2Q92539 896 aa18.01■□□□□ 0.47
DDX39A-208ENST00000588692 BEGAINQ9BUH8 593 aa18.01■□□□□ 0.47
DDX39A-208ENST00000588692 MYO1BO43795 1136 aa18■□□□□ 0.47
DDX39A-208ENST00000588692 AOC2O75106 756 aa18■□□□□ 0.47
DDX39A-208ENST00000588692 SLC5A1P13866 664 aa18■□□□□ 0.47
DDX39A-208ENST00000588692 MTX1Q13505 466 aa18■□□□□ 0.47
DDX39A-208ENST00000588692 TBC1D22AQ8WUA7 517 aa18■□□□□ 0.47
DDX39A-208ENST00000588692 CCDC102AQ96A19 550 aa18■□□□□ 0.47
DDX39A-208ENST00000588692 COPRSQ9NQ92 184 aa18■□□□□ 0.47
DDX39A-208ENST00000588692 SPDYE2BA6NHP3 402 aa17.99■□□□□ 0.47
DDX39A-208ENST00000588692 FRAT2O75474 233 aaPredicted RBP17.99■□□□□ 0.47
DDX39A-208ENST00000588692 SPDYE6P0CI01 402 aa17.99■□□□□ 0.47
DDX39A-208ENST00000588692 NF2P35240 595 aa17.99■□□□□ 0.47
DDX39A-208ENST00000588692 IL15P40933 162 aaPredicted RBP17.99■□□□□ 0.47
DDX39A-208ENST00000588692 CFAP100Q494V2 611 aa17.99■□□□□ 0.47
DDX39A-208ENST00000588692 SIL1Q9H173 461 aa17.99■□□□□ 0.47
DDX39A-208ENST00000588692 PRDM10Q9NQV6 1147 aa17.99■□□□□ 0.47
DDX39A-208ENST00000588692 CEP126Q9P2H0 1117 aa17.99■□□□□ 0.47
DDX39A-208ENST00000588692 SERPINA10Q9UK55 444 aa17.99■□□□□ 0.47
DDX39A-208ENST00000588692 CLUAP1Q96AJ1 413 aa17.98■□□□□ 0.47
DDX39A-208ENST00000588692 TTF2Q9UNY4 1162 aaKnown RBP17.98■□□□□ 0.47
DDX39A-208ENST00000588692 PPP2R3BQ9Y5P8 575 aa17.98■□□□□ 0.47
DDX39A-208ENST00000588692 CA12O43570 354 aa17.97■□□□□ 0.47
DDX39A-208ENST00000588692 BCAMP50895 628 aa17.97■□□□□ 0.47
DDX39A-208ENST00000588692 ZNF157P51786 506 aaPredicted RBP17.97■□□□□ 0.47
DDX39A-208ENST00000588692 ATP2B3Q16720 1220 aa17.97■□□□□ 0.47
DDX39A-208ENST00000588692 SCAF8Q9UPN6 1271 aaKnown RBP17.97■□□□□ 0.47
DDX39A-208ENST00000588692 IQSEC3Q9UPP2 1182 aaPredicted RBP17.97■□□□□ 0.47
DDX39A-208ENST00000588692 TNNQ9UQP3 1299 aa17.97■□□□□ 0.47
DDX39A-208ENST00000588692 FAM155AB1AL88 458 aaPredicted RBP17.96■□□□□ 0.47
DDX39A-208ENST00000588692 SRGAP3O43295 1099 aa17.96■□□□□ 0.47
DDX39A-208ENST00000588692 GNAI2P04899 355 aa17.96■□□□□ 0.47
DDX39A-208ENST00000588692 RBM5P52756 815 aaKnown RBP eCLIP17.96■□□□□ 0.474e-7■□□□□ 8.1
DDX39A-208ENST00000588692 SLC10A3P09131 477 aa17.95■□□□□ 0.46
DDX39A-208ENST00000588692 HSPA8P11142 646 aaKnown RBP17.95■□□□□ 0.46
DDX39A-208ENST00000588692 HDLBPQ00341 1268 aaKnown RBP17.95■□□□□ 0.46
DDX39A-208ENST00000588692 CHAF1AQ13111 956 aaPredicted RBP17.95■□□□□ 0.46
DDX39A-208ENST00000588692 TMEM57Q8N5G2 664 aa17.95■□□□□ 0.46
DDX39A-208ENST00000588692 PRMT6Q96LA8 375 aaPredicted RBP17.95■□□□□ 0.46
DDX39A-208ENST00000588692 DEFB129Q9H1M3 183 aa17.95■□□□□ 0.46
DDX39A-208ENST00000588692 PA2G4Q9UQ80 394 aaKnown RBP17.95■□□□□ 0.46
DDX39A-208ENST00000588692 SUGT1Q9Y2Z0 365 aa17.95■□□□□ 0.46
DDX39A-208ENST00000588692 PRAMEF18Q5VWM3 479 aa17.95■□□□□ 0.46
DDX39A-208ENST00000588692 FTSJ3Q8IY81 847 aaKnown RBP17.95■□□□□ 0.46
DDX39A-208ENST00000588692 TNS4Q8IZW8 715 aa17.95■□□□□ 0.46
DDX39A-208ENST00000588692 PCDHAC2Q9Y5I4 1007 aa17.95■□□□□ 0.46
DDX39A-208ENST00000588692 MAST3O60307 1309 aa17.94■□□□□ 0.46
DDX39A-208ENST00000588692 LBX1P52954 281 aa17.94■□□□□ 0.46
DDX39A-208ENST00000588692 TNFAIP1Q13829 316 aa17.94■□□□□ 0.46
DDX39A-208ENST00000588692 TTLL12Q14166 644 aaPredicted RBP17.94■□□□□ 0.46
DDX39A-208ENST00000588692 WDR66Q8TBY9 1149 aa17.94■□□□□ 0.46
DDX39A-208ENST00000588692 GNL3LQ9NVN8 582 aaKnown RBP17.94■□□□□ 0.46
DDX39A-208ENST00000588692 CLRN2A0PK11 232 aa17.93■□□□□ 0.46
DDX39A-208ENST00000588692 ZBTB22O15209 634 aa17.93■□□□□ 0.46
DDX39A-208ENST00000588692 CRKP46108 304 aa17.93■□□□□ 0.46
DDX39A-208ENST00000588692 SPDYE2Q495Y8 402 aa17.93■□□□□ 0.46
DDX39A-208ENST00000588692 ARMC9Q7Z3E5 817 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms