RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 PUM3Q15397 648 aaKnown RBP20.69■□□□□ 0.9
ERCC2-211ENST00000588652 CCDC102BQ68D86 513 aa20.69■□□□□ 0.9
ERCC2-211ENST00000588652 R3HCC1Q9Y3T6 440 aaKnown RBP20.69■□□□□ 0.9
ERCC2-211ENST00000588652 ARAP2Q8WZ64 1704 aa20.69■□□□□ 0.9
ERCC2-211ENST00000588652 ADCY5O95622 1261 aa20.68■□□□□ 0.9
ERCC2-211ENST00000588652 FGAP02671 866 aa20.68■□□□□ 0.9
ERCC2-211ENST00000588652 PHKA1P46020 1223 aa20.68■□□□□ 0.9
ERCC2-211ENST00000588652 APOBRQ0VD83 1088 aa20.68■□□□□ 0.9
ERCC2-211ENST00000588652 LPIN2Q92539 896 aa20.68■□□□□ 0.9
ERCC2-211ENST00000588652 ELP1O95163 1332 aa20.68■□□□□ 0.9
ERCC2-211ENST00000588652 GPAA1O43292 621 aa20.68■□□□□ 0.9
ERCC2-211ENST00000588652 ARID4AP29374 1257 aaPredicted RBP20.68■□□□□ 0.9
ERCC2-211ENST00000588652 TTF1Q15361 905 aaPredicted RBP20.68■□□□□ 0.9
ERCC2-211ENST00000588652 HELBQ8NG08 1087 aaPredicted RBP20.68■□□□□ 0.9
ERCC2-211ENST00000588652 RRP9O43818 475 aaKnown RBP20.67■□□□□ 0.9
ERCC2-211ENST00000588652 TOM1O60784 492 aa20.67■□□□□ 0.9
ERCC2-211ENST00000588652 ADD2P35612 726 aa20.67■□□□□ 0.9
ERCC2-211ENST00000588652 IMMTQ16891 758 aaKnown RBP20.67■□□□□ 0.9
ERCC2-211ENST00000588652 ZSCAN25Q6NSZ9 544 aa20.67■□□□□ 0.9
ERCC2-211ENST00000588652 FAM173BQ6P4H8 233 aa20.67■□□□□ 0.9
ERCC2-211ENST00000588652 SMARCC2Q8TAQ2 1214 aa20.67■□□□□ 0.9
ERCC2-211ENST00000588652 SMARCC1Q92922 1105 aaPredicted RBP20.67■□□□□ 0.9
ERCC2-211ENST00000588652 LLPHQ9BRT6 129 aaKnown RBP20.67■□□□□ 0.9
ERCC2-211ENST00000588652 COL5A3P25940 1745 aaPredicted RBP20.67■□□□□ 0.9
ERCC2-211ENST00000588652 NIP7Q9Y221 180 aaKnown RBP eCLIP20.67■□□□□ 0.9
ERCC2-211ENST00000588652 SLC9C2Q5TAH2 1124 aa20.66■□□□□ 0.9
ERCC2-211ENST00000588652 CHST3Q7LGC8 479 aa20.66■□□□□ 0.9
ERCC2-211ENST00000588652 PIH1D3Q9NQM4 214 aaKnown RBP20.66■□□□□ 0.9
ERCC2-211ENST00000588652 SEC31BQ9NQW1 1179 aa20.66■□□□□ 0.9
ERCC2-211ENST00000588652 KDM4AO75164 1064 aa20.66■□□□□ 0.9
ERCC2-211ENST00000588652 NTSR2O95665 410 aa20.66■□□□□ 0.9
ERCC2-211ENST00000588652 UQCRFS1P1P0C7P4 283 aa20.66■□□□□ 0.9
ERCC2-211ENST00000588652 HAND2P61296 217 aa20.66■□□□□ 0.9
ERCC2-211ENST00000588652 FBXL16Q8N461 479 aa20.66■□□□□ 0.9
ERCC2-211ENST00000588652 MPHOSPH8Q99549 860 aa20.66■□□□□ 0.9
ERCC2-211ENST00000588652 ATRNO75882 1429 aa20.66■□□□□ 0.9
ERCC2-211ENST00000588652 KIAA2012Q0VF49 1180 aa20.65■□□□□ 0.9
ERCC2-211ENST00000588652 HSP90AA2PQ14568 343 aaPredicted RBP20.65■□□□□ 0.9
ERCC2-211ENST00000588652 NSUN7Q8NE18 718 aaKnown RBP20.65■□□□□ 0.9
ERCC2-211ENST00000588652 DDX11Q96FC9 970 aa20.65■□□□□ 0.9
ERCC2-211ENST00000588652 LAMB2P55268 1798 aa20.65■□□□□ 0.9
ERCC2-211ENST00000588652 IDH1O75874 414 aaKnown RBP20.64■□□□□ 0.89
ERCC2-211ENST00000588652 CTDNEP1O95476 244 aa20.64■□□□□ 0.89
ERCC2-211ENST00000588652 UBE3CQ15386 1083 aa20.64■□□□□ 0.89
ERCC2-211ENST00000588652 FAM98CQ17RN3 349 aaKnown RBP20.64■□□□□ 0.89
ERCC2-211ENST00000588652 CCDC152Q4G0S7 254 aa20.64■□□□□ 0.89
ERCC2-211ENST00000588652 ZNF274Q96GC6 653 aaPredicted RBP20.64■□□□□ 0.89
ERCC2-211ENST00000588652 LIG1P18858 919 aa20.64■□□□□ 0.89
ERCC2-211ENST00000588652 BCORQ6W2J9 1755 aa20.64■□□□□ 0.89
ERCC2-211ENST00000588652 SLC5A1P13866 664 aa20.63■□□□□ 0.89
ERCC2-211ENST00000588652 PDIA3P30101 505 aaKnown RBP20.63■□□□□ 0.89
ERCC2-211ENST00000588652 MPNDQ8N594 471 aa20.63■□□□□ 0.89
ERCC2-211ENST00000588652 ZNF831Q5JPB2 1677 aa20.63■□□□□ 0.89
ERCC2-211ENST00000588652 RTL9Q8NET4 1388 aa20.63■□□□□ 0.89
ERCC2-211ENST00000588652 SNAP23O00161 211 aa20.63■□□□□ 0.89
ERCC2-211ENST00000588652 EVCP57679 992 aa20.63■□□□□ 0.89
ERCC2-211ENST00000588652 CCT2P78371 535 aaKnown RBP20.63■□□□□ 0.89
ERCC2-211ENST00000588652 SCAND2PQ9GZW5 306 aaPredicted RBP20.63■□□□□ 0.89
ERCC2-211ENST00000588652 CCDC192P0DO97 292 aa20.62■□□□□ 0.89
ERCC2-211ENST00000588652 HMGN5P82970 282 aaKnown RBP20.62■□□□□ 0.89
ERCC2-211ENST00000588652 MYH15Q9Y2K3 1946 aa20.62■□□□□ 0.89
ERCC2-211ENST00000588652 ZNF532Q9HCE3 1301 aa20.62■□□□□ 0.89
ERCC2-211ENST00000588652 PTPDC1A2A3K4 754 aa20.62■□□□□ 0.89
ERCC2-211ENST00000588652 H3BQV1 296 aa20.62■□□□□ 0.89
ERCC2-211ENST00000588652 ZNF213O14771 459 aa20.62■□□□□ 0.89
ERCC2-211ENST00000588652 AP5Z1O43299 807 aa20.62■□□□□ 0.89
ERCC2-211ENST00000588652 PDE6AP16499 860 aa20.62■□□□□ 0.89
ERCC2-211ENST00000588652 RESTQ13127 1097 aa20.62■□□□□ 0.89
ERCC2-211ENST00000588652 IFFO2Q5TF58 517 aa20.62■□□□□ 0.89
ERCC2-211ENST00000588652 MB21D2Q8IYB1 491 aaPredicted RBP20.62■□□□□ 0.89
ERCC2-211ENST00000588652 NUP62CLQ9H1M0 184 aa20.62■□□□□ 0.89
ERCC2-211ENST00000588652 NCOA5Q9HCD5 579 aaKnown RBP20.62■□□□□ 0.89
ERCC2-211ENST00000588652 ZNF652Q9Y2D9 606 aa20.62■□□□□ 0.89
ERCC2-211ENST00000588652 LEO1Q8WVC0 666 aaPredicted RBP20.61■□□□□ 0.89
ERCC2-211ENST00000588652 SPATA32Q96LK8 384 aa20.61■□□□□ 0.89
ERCC2-211ENST00000588652 ZNF830Q96NB3 372 aaPredicted RBP20.61■□□□□ 0.89
ERCC2-211ENST00000588652 WWC3Q9ULE0 1092 aa20.61■□□□□ 0.89
ERCC2-211ENST00000588652 SALL1Q9NSC2 1324 aa20.61■□□□□ 0.89
ERCC2-211ENST00000588652 BCL9LQ86UU0 1499 aa20.61■□□□□ 0.89
ERCC2-211ENST00000588652 TCRBV5S4A2TA0A5A2 114 aa20.61■□□□□ 0.89
ERCC2-211ENST00000588652 GOLGA6L4A6NEF3 574 aa20.61■□□□□ 0.89
ERCC2-211ENST00000588652 SPATA5Q8NB90 893 aa20.61■□□□□ 0.89
ERCC2-211ENST00000588652 LINC00116Q8NCU8 138 aa20.61■□□□□ 0.89
ERCC2-211ENST00000588652 GPHNQ9NQX3 736 aaPredicted RBP20.61■□□□□ 0.89
ERCC2-211ENST00000588652 TFIP11Q9UBB9 837 aaKnown RBP20.61■□□□□ 0.89
ERCC2-211ENST00000588652 NAP1L2Q9ULW6 460 aaPredicted RBP20.61■□□□□ 0.89
ERCC2-211ENST00000588652 DOCK2Q92608 1830 aa20.6■□□□□ 0.89
ERCC2-211ENST00000588652 IGHMBP2P38935 993 aaKnown RBP20.6■□□□□ 0.89
ERCC2-211ENST00000588652 RASGRF1Q13972 1273 aa20.6■□□□□ 0.89
ERCC2-211ENST00000588652 MAP3K11Q16584 847 aa20.6■□□□□ 0.89
ERCC2-211ENST00000588652 CLEC4GQ6UXB4 293 aa20.6■□□□□ 0.89
ERCC2-211ENST00000588652 NCOA7Q8NI08 942 aa20.6■□□□□ 0.89
ERCC2-211ENST00000588652 ZSCAN16Q9H4T2 348 aaPredicted RBP20.59■□□□□ 0.89
ERCC2-211ENST00000588652 PRC1O43663 620 aa20.59■□□□□ 0.89
ERCC2-211ENST00000588652 VPS72Q15906 364 aa20.59■□□□□ 0.89
ERCC2-211ENST00000588652 PIBF1Q8WXW3 757 aa20.59■□□□□ 0.89
ERCC2-211ENST00000588652 C8orf37Q96NL8 207 aa20.59■□□□□ 0.89
ERCC2-211ENST00000588652 TTC12Q9H892 705 aaPredicted RBP20.59■□□□□ 0.89
ERCC2-211ENST00000588652 KIF3AQ9Y496 699 aa20.59■□□□□ 0.89
ERCC2-211ENST00000588652 ANTXR2P58335 489 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms