RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 IDH1O75874 414 aaKnown RBP31.33■■■□□ 2.61
SCAMP4-210ENST00000588555 ADD2P35612 726 aa31.33■■■□□ 2.61
SCAMP4-210ENST00000588555 CNKSR1Q969H4 720 aa31.33■■■□□ 2.61
SCAMP4-210ENST00000588555 OSBP2Q969R2 916 aa31.33■■■□□ 2.61
SCAMP4-210ENST00000588555 MAST3O60307 1309 aa31.33■■■□□ 2.61
SCAMP4-210ENST00000588555 HSPA4P34932 840 aa31.33■■■□□ 2.61
SCAMP4-210ENST00000588555 ZSCAN25Q6NSZ9 544 aa31.33■■■□□ 2.61
SCAMP4-210ENST00000588555 CCDC129Q6ZRS4 1044 aa31.33■■■□□ 2.61
SCAMP4-210ENST00000588555 ATF5Q9Y2D1 282 aaPredicted RBP31.33■■■□□ 2.61
SCAMP4-210ENST00000588555 SLC9C2Q5TAH2 1124 aa31.32■■■□□ 2.6
SCAMP4-210ENST00000588555 APPBP2Q92624 585 aa31.32■■■□□ 2.6
SCAMP4-210ENST00000588555 MAP4K1Q92918 833 aa31.32■■■□□ 2.6
SCAMP4-210ENST00000588555 WWC3Q9ULE0 1092 aa31.32■■■□□ 2.6
SCAMP4-210ENST00000588555 PALD1Q9ULE6 856 aa31.32■■■□□ 2.6
SCAMP4-210ENST00000588555 MCCP23508 829 aa31.31■■■□□ 2.6
SCAMP4-210ENST00000588555 IL17RAQ96F46 866 aa31.31■■■□□ 2.6
SCAMP4-210ENST00000588555 PDE6AP16499 860 aa31.3■■■□□ 2.6
SCAMP4-210ENST00000588555 UBE3CQ15386 1083 aa31.3■■■□□ 2.6
SCAMP4-210ENST00000588555 TCRBV5S4A2TA0A5A2 114 aa31.3■■■□□ 2.6
SCAMP4-210ENST00000588555 M0R2C6 588 aa31.3■■■□□ 2.6
SCAMP4-210ENST00000588555 ZNF804AQ7Z570 1209 aa31.3■■■□□ 2.6
SCAMP4-210ENST00000588555 MPNDQ8N594 471 aa31.3■■■□□ 2.6
SCAMP4-210ENST00000588555 ANAPC15P60006 121 aa31.29■■■□□ 2.6
SCAMP4-210ENST00000588555 MAP3K12Q12852 859 aa31.29■■■□□ 2.6
SCAMP4-210ENST00000588555 TDRD7Q8NHU6 1098 aaKnown RBP31.29■■■□□ 2.6
SCAMP4-210ENST00000588555 C7orf43Q8WVR3 580 aa31.29■■■□□ 2.6
SCAMP4-210ENST00000588555 KIAA1551Q9HCM1 1747 aa31.29■■■□□ 2.6
SCAMP4-210ENST00000588555 POLD1P28340 1107 aa31.28■■■□□ 2.6
SCAMP4-210ENST00000588555 WASHC4Q2M389 1173 aa31.28■■■□□ 2.6
SCAMP4-210ENST00000588555 C6orf229H3BNL8 230 aa31.28■■■□□ 2.6
SCAMP4-210ENST00000588555 FRAT2O75474 233 aaPredicted RBP31.28■■■□□ 2.6
SCAMP4-210ENST00000588555 SGIP1Q9BQI5 828 aa31.28■■■□□ 2.6
SCAMP4-210ENST00000588555 PUS7LQ9H0K6 701 aaKnown RBP31.28■■■□□ 2.6
SCAMP4-210ENST00000588555 ZNF532Q9HCE3 1301 aa31.27■■■□□ 2.6
SCAMP4-210ENST00000588555 KCNA3P22001 575 aa31.27■■■□□ 2.6
SCAMP4-210ENST00000588555 DPP8Q6V1X1 898 aaPredicted RBP31.27■■■□□ 2.6
SCAMP4-210ENST00000588555 RBM8AQ9Y5S9 174 aaKnown RBP31.27■■■□□ 2.6
SCAMP4-210ENST00000588555 SNED1Q8TER0 1413 aa31.27■■■□□ 2.6
SCAMP4-210ENST00000588555 PSDA5PKW4 1024 aaPredicted RBP31.26■■■□□ 2.59
SCAMP4-210ENST00000588555 NECTIN1Q15223 517 aa31.26■■■□□ 2.59
SCAMP4-210ENST00000588555 TMX4Q9H1E5 349 aaPredicted RBP31.26■■■□□ 2.59
SCAMP4-210ENST00000588555 CD209Q9NNX6 404 aa31.25■■■□□ 2.59
SCAMP4-210ENST00000588555 LRP2BPQ9P2M1 347 aa31.25■■■□□ 2.59
SCAMP4-210ENST00000588555 IL1R1P14778 569 aa31.25■■■□□ 2.59
SCAMP4-210ENST00000588555 RABEP1Q15276 862 aa31.25■■■□□ 2.59
SCAMP4-210ENST00000588555 MAGEB6Q8N7X4 407 aa31.25■■■□□ 2.59
SCAMP4-210ENST00000588555 KCNB2Q92953 911 aa31.25■■■□□ 2.59
SCAMP4-210ENST00000588555 GOLGB1Q14789 3259 aaKnown RBP31.24■■■□□ 2.59
SCAMP4-210ENST00000588555 DPEP1P16444 411 aa31.24■■■□□ 2.59
SCAMP4-210ENST00000588555 ABCF2Q9UG63 623 aa31.24■■■□□ 2.59
SCAMP4-210ENST00000588555 VPS53Q5VIR6 699 aa31.23■■■□□ 2.59
SCAMP4-210ENST00000588555 RASEFQ8IZ41 740 aa31.23■■■□□ 2.59
SCAMP4-210ENST00000588555 A0A0G2JLW4 131 aa31.22■■■□□ 2.59
SCAMP4-210ENST00000588555 DSCC1Q9BVC3 393 aa31.22■■■□□ 2.59
SCAMP4-210ENST00000588555 SNX14Q9Y5W7 946 aa31.22■■■□□ 2.59
SCAMP4-210ENST00000588555 CHAF1AQ13111 956 aaPredicted RBP31.22■■■□□ 2.59
SCAMP4-210ENST00000588555 SALL1Q9NSC2 1324 aa31.21■■■□□ 2.59
SCAMP4-210ENST00000588555 HSPD1P10809 573 aaKnown RBP31.21■■■□□ 2.59
SCAMP4-210ENST00000588555 TTLL6Q8N841 843 aa31.21■■■□□ 2.59
SCAMP4-210ENST00000588555 FOXP2O15409 715 aa31.2■■■□□ 2.59
SCAMP4-210ENST00000588555 GPAA1O43292 621 aa31.2■■■□□ 2.59
SCAMP4-210ENST00000588555 TGFB2P61812 414 aa31.2■■■□□ 2.59
SCAMP4-210ENST00000588555 TBC1D2Q9BYX2 928 aa31.2■■■□□ 2.59
SCAMP4-210ENST00000588555 CREB3L3Q68CJ9 461 aa31.2■■■□□ 2.58
SCAMP4-210ENST00000588555 CC2D2BQ6DHV5 1058 aa31.2■■■□□ 2.58
SCAMP4-210ENST00000588555 ZNF384Q8TF68 577 aa31.2■■■□□ 2.58
SCAMP4-210ENST00000588555 SNX21Q969T3 373 aa31.2■■■□□ 2.58
SCAMP4-210ENST00000588555 RTFDC1Q9BY42 306 aaPredicted RBP31.2■■■□□ 2.58
SCAMP4-210ENST00000588555 RAI14Q9P0K7 980 aa31.2■■■□□ 2.58
SCAMP4-210ENST00000588555 MAST2Q6P0Q8 1798 aa31.2■■■□□ 2.58
SCAMP4-210ENST00000588555 PTGER2P43116 358 aa31.19■■■□□ 2.58
SCAMP4-210ENST00000588555 WDR66Q8TBY9 1149 aa31.19■■■□□ 2.58
SCAMP4-210ENST00000588555 ZNF219Q9P2Y4 722 aaPredicted RBP31.19■■■□□ 2.58
SCAMP4-210ENST00000588555 JAG2Q9Y219 1238 aa31.19■■■□□ 2.58
SCAMP4-210ENST00000588555 U3KPZ7 1027 aaPredicted RBP31.19■■■□□ 2.58
SCAMP4-210ENST00000588555 SLC27A2O14975 620 aa31.18■■■□□ 2.58
SCAMP4-210ENST00000588555 ZC3H12CQ9C0D7 883 aaKnown RBP31.18■■■□□ 2.58
SCAMP4-210ENST00000588555 COA1Q9GZY4 146 aa31.18■■■□□ 2.58
SCAMP4-210ENST00000588555 RIMBP2O15034 1052 aa31.17■■■□□ 2.58
SCAMP4-210ENST00000588555 BECN1Q14457 450 aa31.17■■■□□ 2.58
SCAMP4-210ENST00000588555 CHD4Q14839 1912 aa31.17■■■□□ 2.58
SCAMP4-210ENST00000588555 CD2BP2O95400 341 aaKnown RBP31.17■■■□□ 2.58
SCAMP4-210ENST00000588555 PRDX5P30044 214 aa31.17■■■□□ 2.58
SCAMP4-210ENST00000588555 ERICH6Q7L0X2 663 aa31.17■■■□□ 2.58
SCAMP4-210ENST00000588555 EYA3Q99504 573 aa31.17■■■□□ 2.58
SCAMP4-210ENST00000588555 ADGRA1Q86SQ6 560 aa31.16■■■□□ 2.58
SCAMP4-210ENST00000588555 NSUN4Q96CB9 384 aaKnown RBP31.16■■■□□ 2.58
SCAMP4-210ENST00000588555 BRCA1P38398 1863 aaKnown RBP31.15■■■□□ 2.58
SCAMP4-210ENST00000588555 C21orf2O43822 256 aa31.15■■■□□ 2.58
SCAMP4-210ENST00000588555 SLC4A3P48751 1232 aa31.15■■■□□ 2.58
SCAMP4-210ENST00000588555 ZGPATQ8N5A5 531 aaKnown RBP31.15■■■□□ 2.58
SCAMP4-210ENST00000588555 CCDC88AQ3V6T2 1871 aa31.15■■■□□ 2.58
SCAMP4-210ENST00000588555 ILDR2Q71H61 639 aa31.15■■■□□ 2.58
SCAMP4-210ENST00000588555 STRBPQ96SI9 672 aaKnown RBP31.15■■■□□ 2.58
SCAMP4-210ENST00000588555 IGSF3O75054 1194 aa31.14■■■□□ 2.58
SCAMP4-210ENST00000588555 CYP7A1P22680 504 aa31.14■■■□□ 2.58
SCAMP4-210ENST00000588555 MECOMQ03112 1051 aa31.14■■■□□ 2.58
SCAMP4-210ENST00000588555 RNF20Q5VTR2 975 aa31.14■■■□□ 2.58
SCAMP4-210ENST00000588555 FAM205AQ6ZU69 1335 aa31.14■■■□□ 2.58
SCAMP4-210ENST00000588555 AIDAQ96BJ3 306 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms