RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 HMMRO75330 724 aa24.97■■□□□ 1.59
DDX39A-207ENST00000588542 HIRAP54198 1017 aaPredicted RBP24.97■■□□□ 1.59
DDX39A-207ENST00000588542 ZNF280AP59817 542 aaPredicted RBP24.97■■□□□ 1.59
DDX39A-207ENST00000588542 LDHDQ86WU2 507 aa24.97■■□□□ 1.59
DDX39A-207ENST00000588542 EGFRP00533 1210 aa24.96■■□□□ 1.59
DDX39A-207ENST00000588542 SAMD7Q7Z3H4 446 aa24.96■■□□□ 1.59
DDX39A-207ENST00000588542 SMC1BQ8NDV3 1235 aa24.96■■□□□ 1.59
DDX39A-207ENST00000588542 GPR108Q9NPR9 543 aa24.96■■□□□ 1.59
DDX39A-207ENST00000588542 USP17L8P0C7I0 530 aa24.95■■□□□ 1.58
DDX39A-207ENST00000588542 PHKA1P46020 1223 aa24.95■■□□□ 1.58
DDX39A-207ENST00000588542 FKBP1AP62942 108 aaKnown RBP24.95■■□□□ 1.58
DDX39A-207ENST00000588542 FSTL1Q12841 308 aa24.95■■□□□ 1.58
DDX39A-207ENST00000588542 XAGE2Q96GT9 111 aa24.95■■□□□ 1.58
DDX39A-207ENST00000588542 PCDHB15Q9Y5E8 787 aa24.95■■□□□ 1.58
DDX39A-207ENST00000588542 COL1A1P02452 1464 aaPredicted RBP24.95■■□□□ 1.58
DDX39A-207ENST00000588542 TBC1D10BQ4KMP7 808 aaPredicted RBP24.94■■□□□ 1.58
DDX39A-207ENST00000588542 TNNI3KQ59H18 835 aa24.94■■□□□ 1.58
DDX39A-207ENST00000588542 CCDC102BQ68D86 513 aa24.94■■□□□ 1.58
DDX39A-207ENST00000588542 CHADLQ6NUI6 762 aa24.94■■□□□ 1.58
DDX39A-207ENST00000588542 FPGT-TNNI3KV9GXZ4 949 aa24.94■■□□□ 1.58
DDX39A-207ENST00000588542 KIAA0825Q8IV33 1275 aa24.93■■□□□ 1.58
DDX39A-207ENST00000588542 NEUROD6Q96NK8 337 aa24.93■■□□□ 1.58
DDX39A-207ENST00000588542 CLEC11AQ9Y240 323 aa24.93■■□□□ 1.58
DDX39A-207ENST00000588542 ZBTB22O15209 634 aa24.92■■□□□ 1.58
DDX39A-207ENST00000588542 FRAT2O75474 233 aaPredicted RBP24.92■■□□□ 1.58
DDX39A-207ENST00000588542 CHAF1AQ13111 956 aaPredicted RBP24.92■■□□□ 1.58
DDX39A-207ENST00000588542 HSP90AB4PQ58FF6 505 aa24.92■■□□□ 1.58
DDX39A-207ENST00000588542 MFSD14BQ5SR56 506 aa24.91■■□□□ 1.58
DDX39A-207ENST00000588542 RBM26Q5T8P6 1007 aaKnown RBP24.91■■□□□ 1.58
DDX39A-207ENST00000588542 ERC1Q8IUD2 1116 aa24.91■■□□□ 1.58
DDX39A-207ENST00000588542 MYOZ2Q9NPC6 264 aa24.91■■□□□ 1.58
DDX39A-207ENST00000588542 PGAP2Q9UHJ9 254 aa24.91■■□□□ 1.58
DDX39A-207ENST00000588542 ECM29Q5VYK3 1845 aa24.91■■□□□ 1.58
DDX39A-207ENST00000588542 AKAP11Q9UKA4 1901 aa24.9■■□□□ 1.58
DDX39A-207ENST00000588542 KIF4BQ2VIQ3 1234 aa24.9■■□□□ 1.58
DDX39A-207ENST00000588542 RHPN1Q8TCX5 695 aa24.9■■□□□ 1.58
DDX39A-207ENST00000588542 MMP14P50281 582 aa24.89■■□□□ 1.58
DDX39A-207ENST00000588542 GRIK5Q16478 980 aa24.89■■□□□ 1.58
DDX39A-207ENST00000588542 MAP1SQ66K74 1059 aaPredicted RBP24.89■■□□□ 1.58
DDX39A-207ENST00000588542 EAF2Q96CJ1 260 aaPredicted RBP24.89■■□□□ 1.58
DDX39A-207ENST00000588542 GNL3LQ9NVN8 582 aaKnown RBP24.89■■□□□ 1.58
DDX39A-207ENST00000588542 SEMA3EO15041 775 aa24.88■■□□□ 1.57
DDX39A-207ENST00000588542 OGFOD1Q8N543 542 aa24.88■■□□□ 1.57
DDX39A-207ENST00000588542 EXOC6Q8TAG9 804 aa24.88■■□□□ 1.57
DDX39A-207ENST00000588542 ZC3H15Q8WU90 426 aaKnown RBP24.88■■□□□ 1.57
DDX39A-207ENST00000588542 TBC1D22AQ8WUA7 517 aa24.88■■□□□ 1.57
DDX39A-207ENST00000588542 DBNDD2Q9BQY9 259 aa24.88■■□□□ 1.57
DDX39A-207ENST00000588542 F8W031 263 aaPredicted RBP24.87■■□□□ 1.57
DDX39A-207ENST00000588542 RAB11FIP3O75154 756 aa24.87■■□□□ 1.57
DDX39A-207ENST00000588542 ITGBL1O95965 494 aaPredicted RBP24.87■■□□□ 1.57
DDX39A-207ENST00000588542 RASGRF1Q13972 1273 aa24.87■■□□□ 1.57
DDX39A-207ENST00000588542 KIF1BPQ96EK5 621 aa24.87■■□□□ 1.57
DDX39A-207ENST00000588542 IL1RAPL2Q9NP60 686 aa24.87■■□□□ 1.57
DDX39A-207ENST00000588542 TLR7Q9NYK1 1049 aaKnown RBP24.87■■□□□ 1.57
DDX39A-207ENST00000588542 DENND2AQ9ULE3 1009 aa24.87■■□□□ 1.57
DDX39A-207ENST00000588542 TRPM7Q96QT4 1865 aa24.86■■□□□ 1.57
DDX39A-207ENST00000588542 APBB1O00213 710 aa24.86■■□□□ 1.57
DDX39A-207ENST00000588542 GORABQ5T7V8 394 aa24.86■■□□□ 1.57
DDX39A-207ENST00000588542 CNTROBQ8N137 903 aa24.86■■□□□ 1.57
DDX39A-207ENST00000588542 CCDC8Q9H0W5 538 aaPredicted RBP24.86■■□□□ 1.57
DDX39A-207ENST00000588542 DBNLQ9UJU6 430 aaKnown RBP24.86■■□□□ 1.57
DDX39A-207ENST00000588542 HDAC9Q9UKV0 1011 aa24.86■■□□□ 1.57
DDX39A-207ENST00000588542 ASTN2O75129 1339 aaPredicted RBP24.86■■□□□ 1.57
DDX39A-207ENST00000588542 ARID4AP29374 1257 aaPredicted RBP24.85■■□□□ 1.57
DDX39A-207ENST00000588542 AAMPQ13685 434 aa24.85■■□□□ 1.57
DDX39A-207ENST00000588542 WDR66Q8TBY9 1149 aa24.85■■□□□ 1.57
DDX39A-207ENST00000588542 ZBED3Q96IU2 234 aaPredicted RBP24.85■■□□□ 1.57
DDX39A-207ENST00000588542 DCTPP1Q9H773 170 aa24.85■■□□□ 1.57
DDX39A-207ENST00000588542 SCARF1Q14162 830 aa24.84■■□□□ 1.57
DDX39A-207ENST00000588542 NBPF9Q3BBW0 867 aa24.84■■□□□ 1.57
DDX39A-207ENST00000588542 MTMR14Q8NCE2 650 aa24.84■■□□□ 1.57
DDX39A-207ENST00000588542 TTF2Q9UNY4 1162 aaKnown RBP24.84■■□□□ 1.57
DDX39A-207ENST00000588542 PCDHAC2Q9Y5I4 1007 aa24.84■■□□□ 1.57
DDX39A-207ENST00000588542 PDS5AQ29RF7 1337 aaKnown RBP24.84■■□□□ 1.57
DDX39A-207ENST00000588542 PASKQ96RG2 1323 aa24.84■■□□□ 1.57
DDX39A-207ENST00000588542 MYO5AQ9Y4I1 1855 aaKnown RBP24.83■■□□□ 1.57
DDX39A-207ENST00000588542 WNT10BO00744 389 aa24.83■■□□□ 1.57
DDX39A-207ENST00000588542 AACSQ86V21 672 aa24.83■■□□□ 1.57
DDX39A-207ENST00000588542 HMG20BQ9P0W2 317 aa24.83■■□□□ 1.57
DDX39A-207ENST00000588542 SALL1Q9NSC2 1324 aa24.83■■□□□ 1.56
DDX39A-207ENST00000588542 HSPA6P17066 643 aa24.82■■□□□ 1.56
DDX39A-207ENST00000588542 MCAMP43121 646 aa24.82■■□□□ 1.56
DDX39A-207ENST00000588542 SUGT1Q9Y2Z0 365 aa24.82■■□□□ 1.56
DDX39A-207ENST00000588542 MYH2Q9UKX2 1941 aa24.81■■□□□ 1.56
DDX39A-207ENST00000588542 UQCRFS1P1P0C7P4 283 aa24.81■■□□□ 1.56
DDX39A-207ENST00000588542 IRX6P78412 446 aaPredicted RBP24.81■■□□□ 1.56
DDX39A-207ENST00000588542 CFAP100Q494V2 611 aa24.81■■□□□ 1.56
DDX39A-207ENST00000588542 PI16Q6UXB8 463 aa24.81■■□□□ 1.56
DDX39A-207ENST00000588542 CLASRPQ8N2M8 674 aaKnown RBP24.81■■□□□ 1.56
DDX39A-207ENST00000588542 GGA3Q9NZ52 723 aa24.81■■□□□ 1.56
DDX39A-207ENST00000588542 FMR1Q06787 632 aaKnown RBP eCLIP24.8■■□□□ 1.56
DDX39A-207ENST00000588542 DLGAP5Q15398 846 aa24.8■■□□□ 1.56
DDX39A-207ENST00000588542 CCDC158Q5M9N0 1113 aa24.8■■□□□ 1.56
DDX39A-207ENST00000588542 TTC39AQ5SRH9 613 aa24.8■■□□□ 1.56
DDX39A-207ENST00000588542 ANGEL2Q5VTE6 544 aaKnown RBP24.8■■□□□ 1.56
DDX39A-207ENST00000588542 SPATA5Q8NB90 893 aa24.8■■□□□ 1.56
DDX39A-207ENST00000588542 ZNF512BQ96KM6 892 aaPredicted RBP24.8■■□□□ 1.56
DDX39A-207ENST00000588542 GLIS2Q9BZE0 524 aaPredicted RBP24.8■■□□□ 1.56
DDX39A-207ENST00000588542 LRRCC1Q9C099 1032 aa24.8■■□□□ 1.56
DDX39A-207ENST00000588542 SERPINA10Q9UK55 444 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms