RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 ZMYM1Q5SVZ6 1142 aa16.51■□□□□ 0.23
NEDD4L-223ENST00000588516 ZNF589Q86UQ0 364 aaPredicted RBP16.51■□□□□ 0.23
NEDD4L-223ENST00000588516 ZNF274Q96GC6 653 aaPredicted RBP16.51■□□□□ 0.23
NEDD4L-223ENST00000588516 PRIMPOLQ96LW4 560 aa16.51■□□□□ 0.23
NEDD4L-223ENST00000588516 NEUROD6Q96NK8 337 aa16.51■□□□□ 0.23
NEDD4L-223ENST00000588516 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.51■□□□□ 0.23
NEDD4L-223ENST00000588516 ZNF609O15014 1411 aa16.5■□□□□ 0.23
NEDD4L-223ENST00000588516 ATP5J2-PTCD1G3V325 749 aa16.5■□□□□ 0.23
NEDD4L-223ENST00000588516 PTCD1O75127 700 aaKnown RBP16.5■□□□□ 0.23
NEDD4L-223ENST00000588516 IFIT1P09914 478 aaKnown RBP16.5■□□□□ 0.23
NEDD4L-223ENST00000588516 VSIG10Q8N0Z9 540 aa16.5■□□□□ 0.23
NEDD4L-223ENST00000588516 SMARCC2Q8TAQ2 1214 aa16.5■□□□□ 0.23
NEDD4L-223ENST00000588516 PIBF1Q8WXW3 757 aa16.5■□□□□ 0.23
NEDD4L-223ENST00000588516 CLSTN2Q9H4D0 955 aa16.5■□□□□ 0.23
NEDD4L-223ENST00000588516 DOT1LQ8TEK3 1739 aa16.49■□□□□ 0.23
NEDD4L-223ENST00000588516 CCDC57Q2TAC2 916 aa16.49■□□□□ 0.23
NEDD4L-223ENST00000588516 ZSCAN25Q6NSZ9 544 aa16.49■□□□□ 0.23
NEDD4L-223ENST00000588516 CDC37L1Q7L3B6 337 aa16.49■□□□□ 0.23
NEDD4L-223ENST00000588516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.49■□□□□ 0.23
NEDD4L-223ENST00000588516 TTC6Q86TZ1 520 aa16.49■□□□□ 0.23
NEDD4L-223ENST00000588516 LEO1Q8WVC0 666 aaPredicted RBP16.49■□□□□ 0.23
NEDD4L-223ENST00000588516 AK7Q96M32 723 aa16.49■□□□□ 0.23
NEDD4L-223ENST00000588516 PDCL3Q9H2J4 239 aa16.49■□□□□ 0.23
NEDD4L-223ENST00000588516 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.49■□□□□ 0.23
NEDD4L-223ENST00000588516 CYP21A2P08686 494 aa16.48■□□□□ 0.23
NEDD4L-223ENST00000588516 FSTL1Q12841 308 aa16.48■□□□□ 0.23
NEDD4L-223ENST00000588516 HSP90AB3PQ58FF7 597 aa16.48■□□□□ 0.23
NEDD4L-223ENST00000588516 GORABQ5T7V8 394 aa16.48■□□□□ 0.23
NEDD4L-223ENST00000588516 GIMAP6Q6P9H5 292 aa16.48■□□□□ 0.23
NEDD4L-223ENST00000588516 KIF6Q6ZMV9 814 aa16.48■□□□□ 0.23
NEDD4L-223ENST00000588516 RBM43Q6ZSC3 357 aaKnown RBP16.48■□□□□ 0.23
NEDD4L-223ENST00000588516 ARHGAP27Q6ZUM4 889 aa16.48■□□□□ 0.23
NEDD4L-223ENST00000588516 ATG9AQ7Z3C6 839 aa16.48■□□□□ 0.23
NEDD4L-223ENST00000588516 PLA2G12BQ9BX93 195 aa16.48■□□□□ 0.23
NEDD4L-223ENST00000588516 AGXT2Q9BYV1 514 aa16.48■□□□□ 0.23
NEDD4L-223ENST00000588516 R3HCC1Q9Y3T6 440 aaKnown RBP16.48■□□□□ 0.23
NEDD4L-223ENST00000588516 WDR19Q8NEZ3 1342 aa16.48■□□□□ 0.23
NEDD4L-223ENST00000588516 GOLIM4O00461 696 aa16.47■□□□□ 0.23
NEDD4L-223ENST00000588516 TYRO3Q06418 890 aa16.47■□□□□ 0.23
NEDD4L-223ENST00000588516 BICD2Q8TD16 824 aa16.47■□□□□ 0.23
NEDD4L-223ENST00000588516 BRF1Q92994 677 aa16.47■□□□□ 0.23
NEDD4L-223ENST00000588516 BCS1LQ9Y276 419 aa16.47■□□□□ 0.23
NEDD4L-223ENST00000588516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.47■□□□□ 0.23
NEDD4L-223ENST00000588516 NBPF26B4DH59 902 aa16.46■□□□□ 0.23
NEDD4L-223ENST00000588516 EXOSC10Q01780 885 aaKnown RBP16.46■□□□□ 0.23
NEDD4L-223ENST00000588516 CHAF1AQ13111 956 aaPredicted RBP16.46■□□□□ 0.23
NEDD4L-223ENST00000588516 RESTQ13127 1097 aa16.46■□□□□ 0.23
NEDD4L-223ENST00000588516 TCIRG1Q13488 830 aa16.46■□□□□ 0.23
NEDD4L-223ENST00000588516 DHX8Q14562 1220 aaKnown RBP16.46■□□□□ 0.23
NEDD4L-223ENST00000588516 DNTTIP2Q5QJE6 756 aaKnown RBP16.46■□□□□ 0.23
NEDD4L-223ENST00000588516 NBPF10Q6P3W6 841 aaKnown RBP16.46■□□□□ 0.23
NEDD4L-223ENST00000588516 DDX46Q7L014 1031 aaKnown RBP16.46■□□□□ 0.23
NEDD4L-223ENST00000588516 NBPF15Q8N660 670 aa16.46■□□□□ 0.23
NEDD4L-223ENST00000588516 ISCA1Q9BUE6 129 aa16.46■□□□□ 0.23
NEDD4L-223ENST00000588516 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.46■□□□□ 0.23
NEDD4L-223ENST00000588516 PCCAP05165 728 aaPredicted RBP16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 STK3Q13188 491 aa16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 NOLC1Q14978 699 aaKnown RBP eCLIP16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 IMMTQ16891 758 aaKnown RBP16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 TAF7LQ5H9L4 462 aa16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 TTC39AQ5SRH9 613 aa16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 SMIM5Q71RC9 77 aa16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 SPTLC3Q9NUV7 552 aa16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 RCOR1Q9UKL0 485 aa16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 KCPQ6ZWJ8 1503 aa16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 STARD3NLO95772 234 aa16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 EVCP57679 992 aa16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 TTF1Q15361 905 aaPredicted RBP16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 CCDC73Q6ZRK6 1079 aa16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 FERMT3Q86UX7 667 aa16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 DACT1Q9NYF0 836 aa16.45■□□□□ 0.22
NEDD4L-223ENST00000588516 TJP1Q07157 1748 aa16.44■□□□□ 0.22
NEDD4L-223ENST00000588516 CDHR2Q9BYE9 1310 aa16.44■□□□□ 0.22
NEDD4L-223ENST00000588516 A0A1B0GUL7 405 aa16.44■□□□□ 0.22
NEDD4L-223ENST00000588516 SLC34A2O95436 690 aa16.44■□□□□ 0.22
NEDD4L-223ENST00000588516 HSPA1AP0DMV8 641 aaKnown RBP16.44■□□□□ 0.22
NEDD4L-223ENST00000588516 HSPA1BP0DMV9 641 aaKnown RBP16.44■□□□□ 0.22
NEDD4L-223ENST00000588516 HSPD1P10809 573 aaKnown RBP16.44■□□□□ 0.22
NEDD4L-223ENST00000588516 AMIGO3Q86WK7 504 aa16.44■□□□□ 0.22
NEDD4L-223ENST00000588516 EDC3Q96F86 508 aaKnown RBP16.44■□□□□ 0.22
NEDD4L-223ENST00000588516 TMOD3Q9NYL9 352 aa16.44■□□□□ 0.22
NEDD4L-223ENST00000588516 MYH15Q9Y2K3 1946 aa16.43■□□□□ 0.22
NEDD4L-223ENST00000588516 E7EWF7 191 aa16.43■□□□□ 0.22
NEDD4L-223ENST00000588516 NEMFO60524 1076 aa16.43■□□□□ 0.22
NEDD4L-223ENST00000588516 IFIT5Q13325 482 aaKnown RBP16.43■□□□□ 0.22
NEDD4L-223ENST00000588516 TTLL7Q6ZT98 887 aa16.43■□□□□ 0.22
NEDD4L-223ENST00000588516 NSUN7Q8NE18 718 aaKnown RBP16.43■□□□□ 0.22
NEDD4L-223ENST00000588516 TDRD7Q8NHU6 1098 aaKnown RBP16.43■□□□□ 0.22
NEDD4L-223ENST00000588516 ZNF512BQ96KM6 892 aaPredicted RBP16.43■□□□□ 0.22
NEDD4L-223ENST00000588516 NAT10Q9H0A0 1025 aaKnown RBP16.43■□□□□ 0.22
NEDD4L-223ENST00000588516 LAMA4Q16363 1823 aa16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 CICQ96RK0 1608 aaPredicted RBP16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 UQCRHLA0A096LP55 91 aa16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 GOLGA6L19H0YKK7 550 aa16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 UQCRHP07919 91 aa16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 LIG1P18858 919 aa16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 CDC25BP30305 580 aa16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 TIMM10P62072 90 aa16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 PLCB2Q00722 1185 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms