RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 RBM26Q5T8P6 1007 aaKnown RBP13.08□□□□□ -0.32
TPM4-209ENST00000588483 SAPCD2Q86UD0 394 aa13.08□□□□□ -0.32
TPM4-209ENST00000588483 USP48Q86UV5 1035 aa13.08□□□□□ -0.32
TPM4-209ENST00000588483 DZIP1LQ8IYY4 767 aaKnown RBP13.08□□□□□ -0.32
TPM4-209ENST00000588483 LPIN2Q92539 896 aa13.08□□□□□ -0.32
TPM4-209ENST00000588483 FBXW7Q969H0 707 aa13.08□□□□□ -0.32
TPM4-209ENST00000588483 MKRN1Q9UHC7 482 aaKnown RBP13.08□□□□□ -0.32
TPM4-209ENST00000588483 HDAC9Q9UKV0 1011 aa13.08□□□□□ -0.32
TPM4-209ENST00000588483 ASTN2O75129 1339 aaPredicted RBP13.08□□□□□ -0.32
TPM4-209ENST00000588483 SRGAP3O43295 1099 aa13.07□□□□□ -0.32
TPM4-209ENST00000588483 IFIT1P09914 478 aaKnown RBP13.07□□□□□ -0.32
TPM4-209ENST00000588483 RLBP1P12271 317 aa13.07□□□□□ -0.32
TPM4-209ENST00000588483 VEGFBP49765 207 aa13.07□□□□□ -0.32
TPM4-209ENST00000588483 DEFB115Q30KQ5 88 aa13.07□□□□□ -0.32
TPM4-209ENST00000588483 NBPF9Q3BBW0 867 aa13.07□□□□□ -0.32
TPM4-209ENST00000588483 CAVIN4Q5BKX8 364 aa13.07□□□□□ -0.32
TPM4-209ENST00000588483 ANGEL2Q5VTE6 544 aaKnown RBP13.07□□□□□ -0.32
TPM4-209ENST00000588483 KIAA0825Q8IV33 1275 aa13.07□□□□□ -0.32
TPM4-209ENST00000588483 SULF1Q8IWU6 871 aa13.07□□□□□ -0.32
TPM4-209ENST00000588483 FTSJ3Q8IY81 847 aaKnown RBP13.07□□□□□ -0.32
TPM4-209ENST00000588483 COL1A1P02452 1464 aaPredicted RBP13.07□□□□□ -0.32
TPM4-209ENST00000588483 MYH13Q9UKX3 1938 aa13.06□□□□□ -0.32
TPM4-209ENST00000588483 ADM5C9JUS6 153 aa13.06□□□□□ -0.32
TPM4-209ENST00000588483 SLC5A1P13866 664 aa13.06□□□□□ -0.32
TPM4-209ENST00000588483 MFSD14BQ5SR56 506 aa13.06□□□□□ -0.32
TPM4-209ENST00000588483 TBC1D22AQ8WUA7 517 aa13.06□□□□□ -0.32
TPM4-209ENST00000588483 CEP126Q9P2H0 1117 aa13.06□□□□□ -0.32
TPM4-209ENST00000588483 ABT1Q9ULW3 272 aaKnown RBP13.06□□□□□ -0.32
TPM4-209ENST00000588483 PA2G4Q9UQ80 394 aaKnown RBP13.06□□□□□ -0.32
TPM4-209ENST00000588483 PAPPA2Q9BXP8 1791 aa13.05□□□□□ -0.32
TPM4-209ENST00000588483 ZBTB7BO15156 539 aaPredicted RBP13.05□□□□□ -0.32
TPM4-209ENST00000588483 BCAMP50895 628 aa13.05□□□□□ -0.32
TPM4-209ENST00000588483 POLA2Q14181 598 aa13.05□□□□□ -0.32
TPM4-209ENST00000588483 VPS37DQ86XT2 251 aa13.05□□□□□ -0.32
TPM4-209ENST00000588483 SIL1Q9H173 461 aa13.05□□□□□ -0.32
TPM4-209ENST00000588483 SERPINA10Q9UK55 444 aa13.05□□□□□ -0.32
TPM4-209ENST00000588483 SUGT1Q9Y2Z0 365 aa13.05□□□□□ -0.32
TPM4-209ENST00000588483 WDR33Q9C0J8 1336 aaKnown RBP13.05□□□□□ -0.32
TPM4-209ENST00000588483 PNMA6EA0A0J9YXQ4 647 aa13.04□□□□□ -0.32
TPM4-209ENST00000588483 SPDYE2BA6NHP3 402 aa13.04□□□□□ -0.32
TPM4-209ENST00000588483 SPDYE6P0CI01 402 aa13.04□□□□□ -0.32
TPM4-209ENST00000588483 MS4A1P11836 297 aa13.04□□□□□ -0.32
TPM4-209ENST00000588483 ECE1P42892 770 aa13.04□□□□□ -0.32
TPM4-209ENST00000588483 FKBP1BP68106 108 aa13.04□□□□□ -0.32
TPM4-209ENST00000588483 ATP2B3Q16720 1220 aa13.04□□□□□ -0.32
TPM4-209ENST00000588483 APOBEC3FQ8IUX4 373 aaKnown RBP13.04□□□□□ -0.32
TPM4-209ENST00000588483 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
TPM4-209ENST00000588483 CDCA5Q96FF9 252 aa13.04□□□□□ -0.32
TPM4-209ENST00000588483 MRIQ9BWK5 157 aa13.04□□□□□ -0.32
TPM4-209ENST00000588483 HDLBPQ00341 1268 aaKnown RBP13.03□□□□□ -0.32
TPM4-209ENST00000588483 DLGAP5Q15398 846 aa13.03□□□□□ -0.32
TPM4-209ENST00000588483 CFAP100Q494V2 611 aa13.03□□□□□ -0.32
TPM4-209ENST00000588483 DLK2Q6UY11 383 aa13.03□□□□□ -0.32
TPM4-209ENST00000588483 ITPRIPQ8IWB1 547 aa13.03□□□□□ -0.32
TPM4-209ENST00000588483 CAPNS2Q96L46 248 aa13.03□□□□□ -0.32
TPM4-209ENST00000588483 GBA2Q9HCG7 927 aaPredicted RBP13.03□□□□□ -0.32
TPM4-209ENST00000588483 SEMA3EO15041 775 aa13.02□□□□□ -0.33
TPM4-209ENST00000588483 ATP8B2P98198 1209 aa13.02□□□□□ -0.33
TPM4-209ENST00000588483 ZNF408Q9H9D4 720 aa13.02□□□□□ -0.33
TPM4-209ENST00000588483 RCAN3Q9UKA8 241 aa13.02□□□□□ -0.33
TPM4-209ENST00000588483 TTF2Q9UNY4 1162 aaKnown RBP13.02□□□□□ -0.33
TPM4-209ENST00000588483 JAG2Q9Y219 1238 aa13.02□□□□□ -0.33
TPM4-209ENST00000588483 PPP2R3BQ9Y5P8 575 aa13.02□□□□□ -0.33
TPM4-209ENST00000588483 PDS5AQ29RF7 1337 aaKnown RBP13.02□□□□□ -0.33
TPM4-209ENST00000588483 F8W031 263 aaPredicted RBP13.01□□□□□ -0.33
TPM4-209ENST00000588483 HSPA1AP0DMV8 641 aaKnown RBP13.01□□□□□ -0.33
TPM4-209ENST00000588483 HSPA1BP0DMV9 641 aaKnown RBP13.01□□□□□ -0.33
TPM4-209ENST00000588483 MAP2K2P36507 400 aa13.01□□□□□ -0.33
TPM4-209ENST00000588483 HUNKP57058 714 aa13.01□□□□□ -0.33
TPM4-209ENST00000588483 CYP4F22Q6NT55 531 aa13.01□□□□□ -0.33
TPM4-209ENST00000588483 C2orf69Q8N8R5 385 aa13.01□□□□□ -0.33
TPM4-209ENST00000588483 WDR66Q8TBY9 1149 aa13.01□□□□□ -0.33
TPM4-209ENST00000588483 PRMT6Q96LA8 375 aaPredicted RBP13.01□□□□□ -0.33
TPM4-209ENST00000588483 WBP1LQ9NX94 342 aa13.01□□□□□ -0.33
TPM4-209ENST00000588483 IQSEC3Q9UPP2 1182 aaPredicted RBP13.01□□□□□ -0.33
TPM4-209ENST00000588483 AKAP2Q9Y2D5 859 aa13.01□□□□□ -0.33
TPM4-209ENST00000588483 MAST3O60307 1309 aa13.01□□□□□ -0.33
TPM4-209ENST00000588483 SALL1Q9NSC2 1324 aa13.01□□□□□ -0.33
TPM4-209ENST00000588483 MYO1BO43795 1136 aa13□□□□□ -0.33
TPM4-209ENST00000588483 FRAT2O75474 233 aaPredicted RBP13□□□□□ -0.33
TPM4-209ENST00000588483 MAP2K1Q02750 393 aaPredicted RBP13□□□□□ -0.33
TPM4-209ENST00000588483 TFCP2Q12800 502 aa13□□□□□ -0.33
TPM4-209ENST00000588483 GRIK5Q16478 980 aa13□□□□□ -0.33
TPM4-209ENST00000588483 PANK1Q8TE04 598 aa13□□□□□ -0.33
TPM4-209ENST00000588483 GPR108Q9NPR9 543 aa13□□□□□ -0.33
TPM4-209ENST00000588483 GNL3LQ9NVN8 582 aaKnown RBP13□□□□□ -0.33
TPM4-209ENST00000588483 NOP58Q9Y2X3 529 aaKnown RBP13□□□□□ -0.33
TPM4-209ENST00000588483 PCDHAC2Q9Y5I4 1007 aa13□□□□□ -0.33
TPM4-209ENST00000588483 AOX1Q06278 1338 aa12.99□□□□□ -0.33
TPM4-209ENST00000588483 A0A1B0GUL7 405 aa12.99□□□□□ -0.33
TPM4-209ENST00000588483 PHKA1P46020 1223 aa12.99□□□□□ -0.33
TPM4-209ENST00000588483 CRKP46108 304 aa12.99□□□□□ -0.33
TPM4-209ENST00000588483 CHAF1AQ13111 956 aaPredicted RBP12.99□□□□□ -0.33
TPM4-209ENST00000588483 MVPQ14764 893 aaKnown RBP12.99□□□□□ -0.33
TPM4-209ENST00000588483 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
TPM4-209ENST00000588483 CCDC102BQ68D86 513 aa12.99□□□□□ -0.33
TPM4-209ENST00000588483 RGMBQ6NW40 437 aa12.99□□□□□ -0.33
TPM4-209ENST00000588483 CEP85Q6P2H3 762 aa12.99□□□□□ -0.33
TPM4-209ENST00000588483 ZDHHC15Q96MV8 337 aa12.99□□□□□ -0.33
TPM4-209ENST00000588483 DEFB129Q9H1M3 183 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms