RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 CHRNDQ07001 517 aa19.59■□□□□ 0.73
IFT20-216ENST00000588477 CERS5Q8N5B7 392 aa19.59■□□□□ 0.73
IFT20-216ENST00000588477 CD99L2Q8TCZ2 262 aa19.59■□□□□ 0.73
IFT20-216ENST00000588477 ERO1AQ96HE7 468 aa19.59■□□□□ 0.73
IFT20-216ENST00000588477 STK31Q9BXU1 1019 aa19.59■□□□□ 0.73
IFT20-216ENST00000588477 PTPN22Q9Y2R2 807 aa19.59■□□□□ 0.73
IFT20-216ENST00000588477 BRCA2P51587 3418 aa19.58■□□□□ 0.73
IFT20-216ENST00000588477 F8W031 263 aaPredicted RBP19.58■□□□□ 0.72
IFT20-216ENST00000588477 SNAP23O00161 211 aa19.58■□□□□ 0.72
IFT20-216ENST00000588477 G2E3Q7L622 706 aa19.58■□□□□ 0.72
IFT20-216ENST00000588477 MTMR14Q8NCE2 650 aa19.58■□□□□ 0.72
IFT20-216ENST00000588477 PPP2R3BQ9Y5P8 575 aa19.58■□□□□ 0.72
IFT20-216ENST00000588477 CLRN2A0PK11 232 aa19.57■□□□□ 0.72
IFT20-216ENST00000588477 MYO1BO43795 1136 aa19.57■□□□□ 0.72
IFT20-216ENST00000588477 OTUD7BQ6GQQ9 843 aa19.57■□□□□ 0.72
IFT20-216ENST00000588477 PLA2G12BQ9BX93 195 aa19.57■□□□□ 0.72
IFT20-216ENST00000588477 TAF5LO75529 589 aa19.56■□□□□ 0.72
IFT20-216ENST00000588477 USP2O75604 605 aaPredicted RBP19.56■□□□□ 0.72
IFT20-216ENST00000588477 CSF1RP07333 972 aa19.56■□□□□ 0.72
IFT20-216ENST00000588477 CRHR2Q13324 411 aa19.56■□□□□ 0.72
IFT20-216ENST00000588477 GCKRQ14397 625 aa19.56■□□□□ 0.72
IFT20-216ENST00000588477 SUPT20HL1Q3ZLR7 823 aa19.56■□□□□ 0.72
IFT20-216ENST00000588477 CFAP100Q494V2 611 aa19.56■□□□□ 0.72
IFT20-216ENST00000588477 NBPF12Q5TAG4 269 aaPredicted RBP19.56■□□□□ 0.72
IFT20-216ENST00000588477 TSR2Q969E8 191 aaKnown RBP19.56■□□□□ 0.72
IFT20-216ENST00000588477 PRMT6Q96LA8 375 aaPredicted RBP19.56■□□□□ 0.72
IFT20-216ENST00000588477 VEZTQ9HBM0 779 aa19.56■□□□□ 0.72
IFT20-216ENST00000588477 UNCXA6NJT0 531 aa19.55■□□□□ 0.72
IFT20-216ENST00000588477 SLC4A2P04920 1241 aa19.55■□□□□ 0.72
IFT20-216ENST00000588477 EN2P19622 333 aaPredicted RBP19.55■□□□□ 0.72
IFT20-216ENST00000588477 GJA5P36382 358 aa19.55■□□□□ 0.72
IFT20-216ENST00000588477 IREB2P48200 963 aaKnown RBP19.55■□□□□ 0.72
IFT20-216ENST00000588477 HELBQ8NG08 1087 aaPredicted RBP19.55■□□□□ 0.72
IFT20-216ENST00000588477 EFCC1Q9HA90 598 aa19.55■□□□□ 0.72
IFT20-216ENST00000588477 IRS2Q9Y4H2 1338 aa19.54■□□□□ 0.72
IFT20-216ENST00000588477 SPDYE2BA6NHP3 402 aa19.54■□□□□ 0.72
IFT20-216ENST00000588477 SPDYE6P0CI01 402 aa19.54■□□□□ 0.72
IFT20-216ENST00000588477 CASP7P55210 303 aa19.54■□□□□ 0.72
IFT20-216ENST00000588477 SP3Q02447 781 aa19.54■□□□□ 0.72
IFT20-216ENST00000588477 PTPN18Q99952 460 aa19.54■□□□□ 0.72
IFT20-216ENST00000588477 AOX1Q06278 1338 aa19.53■□□□□ 0.72
IFT20-216ENST00000588477 ANKRD18BA2A2Z9 1011 aa19.53■□□□□ 0.72
IFT20-216ENST00000588477 RBM5P52756 815 aaKnown RBP eCLIP19.53■□□□□ 0.72
IFT20-216ENST00000588477 ANKRD13AQ8IZ07 590 aa19.53■□□□□ 0.72
IFT20-216ENST00000588477 JAG2Q9Y219 1238 aa19.53■□□□□ 0.72
IFT20-216ENST00000588477 IL1R1P14778 569 aa19.52■□□□□ 0.72
IFT20-216ENST00000588477 CAP1Q01518 475 aa19.52■□□□□ 0.72
IFT20-216ENST00000588477 RASA3Q14644 834 aa19.52■□□□□ 0.72
IFT20-216ENST00000588477 TWISTNBQ3B726 338 aaPredicted RBP19.52■□□□□ 0.72
IFT20-216ENST00000588477 C15orf52Q6ZUT6 534 aaKnown RBP19.52■□□□□ 0.72
IFT20-216ENST00000588477 ZNF804AQ7Z570 1209 aa19.52■□□□□ 0.72
IFT20-216ENST00000588477 ARMC5Q96C12 935 aa19.52■□□□□ 0.72
IFT20-216ENST00000588477 MYH16Q9H6N6 1097 aa19.52■□□□□ 0.72
IFT20-216ENST00000588477 TESPA1A2RU30 521 aaPredicted RBP19.51■□□□□ 0.71
IFT20-216ENST00000588477 FKBP1AP62942 108 aaKnown RBP19.51■□□□□ 0.71
IFT20-216ENST00000588477 PRKRIP1Q9H875 184 aaPredicted RBP19.51■□□□□ 0.71
IFT20-216ENST00000588477 ELP3Q9H9T3 547 aa19.51■□□□□ 0.71
IFT20-216ENST00000588477 ZSWIM8A7E2V4 1837 aa19.51■□□□□ 0.71
IFT20-216ENST00000588477 ARAP2Q8WZ64 1704 aa19.51■□□□□ 0.71
IFT20-216ENST00000588477 FLIIQ13045 1269 aa19.5■□□□□ 0.71
IFT20-216ENST00000588477 DNAAF4Q8WXU2 420 aa19.5■□□□□ 0.71
IFT20-216ENST00000588477 OPTNQ96CV9 577 aa19.5■□□□□ 0.71
IFT20-216ENST00000588477 TMEM106CQ9BVX2 250 aa19.5■□□□□ 0.71
IFT20-216ENST00000588477 IFIT5Q13325 482 aaKnown RBP19.49■□□□□ 0.71
IFT20-216ENST00000588477 FKBP5Q13451 457 aaPredicted RBP19.49■□□□□ 0.71
IFT20-216ENST00000588477 LINS1Q8NG48 757 aa19.49■□□□□ 0.71
IFT20-216ENST00000588477 CHMP3Q9Y3E7 222 aa19.49■□□□□ 0.71
IFT20-216ENST00000588477 PLIN1O60240 522 aa19.48■□□□□ 0.71
IFT20-216ENST00000588477 MS4A4AQ96JQ5 239 aa19.48■□□□□ 0.71
IFT20-216ENST00000588477 FXR1P51114 621 aaKnown RBP eCLIP19.47■□□□□ 0.71
IFT20-216ENST00000588477 FOXO4P98177 505 aa19.47■□□□□ 0.71
IFT20-216ENST00000588477 ZNF333Q96JL9 665 aa19.47■□□□□ 0.71
IFT20-216ENST00000588477 TDRD3Q9H7E2 651 aaKnown RBP19.47■□□□□ 0.71
IFT20-216ENST00000588477 ZNF70Q9UC06 446 aaPredicted RBP19.47■□□□□ 0.71
IFT20-216ENST00000588477 TNFAIP1Q13829 316 aa19.46■□□□□ 0.71
IFT20-216ENST00000588477 TAF1CQ15572 869 aaPredicted RBP19.46■□□□□ 0.71
IFT20-216ENST00000588477 SLC9C1Q4G0N8 1177 aa19.46■□□□□ 0.71
IFT20-216ENST00000588477 NBPF11Q86T75 865 aa19.46■□□□□ 0.71
IFT20-216ENST00000588477 CNKSR2Q8WXI2 1034 aa19.46■□□□□ 0.71
IFT20-216ENST00000588477 PTCH2Q9Y6C5 1203 aa19.46■□□□□ 0.71
IFT20-216ENST00000588477 ARHGEF6Q15052 776 aa19.45■□□□□ 0.7
IFT20-216ENST00000588477 SPDYE2Q495Y8 402 aa19.45■□□□□ 0.7
IFT20-216ENST00000588477 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.45■□□□□ 0.7
IFT20-216ENST00000588477 BRI3BPQ8WY22 251 aa19.45■□□□□ 0.7
IFT20-216ENST00000588477 ZNF594Q96JF6 807 aaPredicted RBP19.45■□□□□ 0.7
IFT20-216ENST00000588477 ZFYVE28Q9HCC9 887 aa19.45■□□□□ 0.7
IFT20-216ENST00000588477 TTF2Q9UNY4 1162 aaKnown RBP19.45■□□□□ 0.7
IFT20-216ENST00000588477 CCL15-CCL14A0A0B4J2E2 113 aa19.44■□□□□ 0.7
IFT20-216ENST00000588477 CCL15Q16663 113 aa19.44■□□□□ 0.7
IFT20-216ENST00000588477 SLC4A8Q2Y0W8 1093 aa19.44■□□□□ 0.7
IFT20-216ENST00000588477 MFSD14BQ5SR56 506 aa19.44■□□□□ 0.7
IFT20-216ENST00000588477 LMBR1LQ6UX01 489 aa19.44■□□□□ 0.7
IFT20-216ENST00000588477 LDHAL6AQ6ZMR3 332 aa19.44■□□□□ 0.7
IFT20-216ENST00000588477 CDAN1Q8IWY9 1227 aa19.44■□□□□ 0.7
IFT20-216ENST00000588477 TEPSINQ96N21 525 aa19.44■□□□□ 0.7
IFT20-216ENST00000588477 COLQQ9Y215 455 aaPredicted RBP19.44■□□□□ 0.7
IFT20-216ENST00000588477 FAM205AQ6ZU69 1335 aa19.44■□□□□ 0.7
IFT20-216ENST00000588477 AK9Q5TCS8 1911 aa19.43■□□□□ 0.7
IFT20-216ENST00000588477 TCP10L2B9ZVM9 353 aa19.43■□□□□ 0.7
IFT20-216ENST00000588477 MYCP01106 439 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms