RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.09□□□□□ -0.63
CIRBP-218ENST00000588344 DBNDD2Q9BQY9 259 aa11.09□□□□□ -0.63
CIRBP-218ENST00000588344 MRIQ9BWK5 157 aa11.09□□□□□ -0.63
CIRBP-218ENST00000588344 DBNLQ9UJU6 430 aaKnown RBP11.09□□□□□ -0.63
CIRBP-218ENST00000588344 HDAC9Q9UKV0 1011 aa11.09□□□□□ -0.63
CIRBP-218ENST00000588344 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.09□□□□□ -0.63
CIRBP-218ENST00000588344 ZNF609O15014 1411 aa11.09□□□□□ -0.63
CIRBP-218ENST00000588344 TAF1P21675 1872 aa11.08□□□□□ -0.64
CIRBP-218ENST00000588344 ERC2O15083 957 aa11.08□□□□□ -0.64
CIRBP-218ENST00000588344 ATP5JP18859 108 aa11.08□□□□□ -0.64
CIRBP-218ENST00000588344 NUCB1Q02818 461 aa11.08□□□□□ -0.64
CIRBP-218ENST00000588344 TMED8Q6PL24 325 aaPredicted RBP11.08□□□□□ -0.64
CIRBP-218ENST00000588344 CENPQQ7L2Z9 268 aaPredicted RBP11.08□□□□□ -0.64
CIRBP-218ENST00000588344 PNMA8AQ86V59 439 aaPredicted RBP11.08□□□□□ -0.64
CIRBP-218ENST00000588344 CHD1LQ86WJ1 897 aa11.08□□□□□ -0.64
CIRBP-218ENST00000588344 SPATA5Q8NB90 893 aa11.08□□□□□ -0.64
CIRBP-218ENST00000588344 FBXW7Q969H0 707 aa11.08□□□□□ -0.64
CIRBP-218ENST00000588344 CCDC136Q96JN2 1154 aa11.08□□□□□ -0.64
CIRBP-218ENST00000588344 GPBP1L1Q9HC44 474 aaPredicted RBP11.08□□□□□ -0.64
CIRBP-218ENST00000588344 KCNQ5Q9NR82 932 aa11.08□□□□□ -0.64
CIRBP-218ENST00000588344 LTBP1Q14766 1721 aa11.08□□□□□ -0.64
CIRBP-218ENST00000588344 ZNF541Q9H0D2 1346 aa11.08□□□□□ -0.64
CIRBP-218ENST00000588344 SALL1Q9NSC2 1324 aa11.08□□□□□ -0.64
CIRBP-218ENST00000588344 SMARCA5O60264 1052 aaPredicted RBP11.07□□□□□ -0.64
CIRBP-218ENST00000588344 USP17L8P0C7I0 530 aa11.07□□□□□ -0.64
CIRBP-218ENST00000588344 GMPSP49915 693 aaPredicted RBP11.07□□□□□ -0.64
CIRBP-218ENST00000588344 MFSD14BQ5SR56 506 aa11.07□□□□□ -0.64
CIRBP-218ENST00000588344 SLF2Q8IX21 1173 aa11.07□□□□□ -0.64
CIRBP-218ENST00000588344 GMLQ99445 158 aa11.07□□□□□ -0.64
CIRBP-218ENST00000588344 ECHDC1Q9NTX5 307 aa11.07□□□□□ -0.64
CIRBP-218ENST00000588344 PPP4R2Q9NY27 417 aa11.07□□□□□ -0.64
CIRBP-218ENST00000588344 GPRC5DQ9NZD1 345 aa11.07□□□□□ -0.64
CIRBP-218ENST00000588344 CNOT7Q9UIV1 285 aaKnown RBP11.07□□□□□ -0.64
CIRBP-218ENST00000588344 HACL1Q9UJ83 578 aa11.07□□□□□ -0.64
CIRBP-218ENST00000588344 MAST3O60307 1309 aa11.07□□□□□ -0.64
CIRBP-218ENST00000588344 TTC41PQ6P2S7 1318 aa11.07□□□□□ -0.64
CIRBP-218ENST00000588344 ZNF280AP59817 542 aaPredicted RBP11.06□□□□□ -0.64
CIRBP-218ENST00000588344 HDLBPQ00341 1268 aaKnown RBP11.06□□□□□ -0.64
CIRBP-218ENST00000588344 CHAF1AQ13111 956 aaPredicted RBP11.06□□□□□ -0.64
CIRBP-218ENST00000588344 RASGRF1Q13972 1273 aa11.06□□□□□ -0.64
CIRBP-218ENST00000588344 TTF1Q15361 905 aaPredicted RBP11.06□□□□□ -0.64
CIRBP-218ENST00000588344 B4GALNT3Q6L9W6 998 aa11.06□□□□□ -0.64
CIRBP-218ENST00000588344 USP50Q70EL3 339 aaPredicted RBP11.06□□□□□ -0.64
CIRBP-218ENST00000588344 ADARB2Q9NS39 739 aaKnown RBP11.06□□□□□ -0.64
CIRBP-218ENST00000588344 HMG20BQ9P0W2 317 aa11.06□□□□□ -0.64
CIRBP-218ENST00000588344 IQSEC3Q9UPP2 1182 aaPredicted RBP11.06□□□□□ -0.64
CIRBP-218ENST00000588344 ZBTB12Q9Y330 459 aaPredicted RBP11.06□□□□□ -0.64
CIRBP-218ENST00000588344 GLRX3O76003 335 aaKnown RBP11.05□□□□□ -0.64
CIRBP-218ENST00000588344 LDHBP07195 334 aaKnown RBP11.05□□□□□ -0.64
CIRBP-218ENST00000588344 SCNN1DP51172 638 aa11.05□□□□□ -0.64
CIRBP-218ENST00000588344 CACNA1SQ13698 1873 aa11.05□□□□□ -0.64
CIRBP-218ENST00000588344 C16orf71Q8IYS4 520 aaPredicted RBP11.05□□□□□ -0.64
CIRBP-218ENST00000588344 RRAGCQ9HB90 399 aa11.05□□□□□ -0.64
CIRBP-218ENST00000588344 TLR7Q9NYK1 1049 aaKnown RBP11.05□□□□□ -0.64
CIRBP-218ENST00000588344 STAP2Q9UGK3 403 aa11.05□□□□□ -0.64
CIRBP-218ENST00000588344 SERPINA10Q9UK55 444 aa11.05□□□□□ -0.64
CIRBP-218ENST00000588344 COL4A5P29400 1685 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 MX1P20591 662 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 EPHX2P34913 555 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 MCAMP43121 646 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 GSTO1P78417 241 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 LRRFIP1Q32MZ4 808 aaKnown RBP11.04□□□□□ -0.64
CIRBP-218ENST00000588344 ERICH6Q7L0X2 663 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 TICAM2Q86XR7 235 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 KIAA0825Q8IV33 1275 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 MICALL2Q8IY33 904 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 ZNF784Q8NCA9 323 aaPredicted RBP11.04□□□□□ -0.64
CIRBP-218ENST00000588344 MTMR14Q8NCE2 650 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 ZC3H15Q8WU90 426 aaKnown RBP11.04□□□□□ -0.64
CIRBP-218ENST00000588344 HAUS7Q99871 368 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 LNPKQ9C0E8 428 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 BCL11AQ9H165 835 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 OSBPL3Q9H4L5 887 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 TAF1DQ9H5J8 278 aaPredicted RBP11.04□□□□□ -0.64
CIRBP-218ENST00000588344 LRP2BPQ9P2M1 347 aa11.04□□□□□ -0.64
CIRBP-218ENST00000588344 POTECB2RU33 542 aa11.03□□□□□ -0.64
CIRBP-218ENST00000588344 LDHCP07864 332 aa11.03□□□□□ -0.64
CIRBP-218ENST00000588344 MAP3K12Q12852 859 aa11.03□□□□□ -0.64
CIRBP-218ENST00000588344 CERS5Q8N5B7 392 aa11.03□□□□□ -0.64
CIRBP-218ENST00000588344 ZNF526Q8TF50 670 aaPredicted RBP11.03□□□□□ -0.64
CIRBP-218ENST00000588344 FAM163AQ96GL9 167 aaPredicted RBP11.03□□□□□ -0.64
CIRBP-218ENST00000588344 MYOZ2Q9NPC6 264 aa11.03□□□□□ -0.64
CIRBP-218ENST00000588344 ABCF2Q9UG63 623 aa11.03□□□□□ -0.64
CIRBP-218ENST00000588344 TTF2Q9UNY4 1162 aaKnown RBP11.03□□□□□ -0.64
CIRBP-218ENST00000588344 AOX1Q06278 1338 aa11.03□□□□□ -0.64
CIRBP-218ENST00000588344 MYO1BO43795 1136 aa11.02□□□□□ -0.65
CIRBP-218ENST00000588344 CYP2E1P05181 493 aaPredicted RBP11.02□□□□□ -0.65
CIRBP-218ENST00000588344 EPS15P42566 896 aa11.02□□□□□ -0.65
CIRBP-218ENST00000588344 ZAP70P43403 619 aa11.02□□□□□ -0.65
CIRBP-218ENST00000588344 PDE1AP54750 535 aa11.02□□□□□ -0.65
CIRBP-218ENST00000588344 SCARF1Q14162 830 aa11.02□□□□□ -0.65
CIRBP-218ENST00000588344 DLGAP5Q15398 846 aa11.02□□□□□ -0.65
CIRBP-218ENST00000588344 HHIPL2Q6UWX4 724 aa11.02□□□□□ -0.65
CIRBP-218ENST00000588344 DZIP1Q86YF9 867 aaKnown RBP11.02□□□□□ -0.65
CIRBP-218ENST00000588344 TEKT1Q969V4 418 aa11.02□□□□□ -0.65
CIRBP-218ENST00000588344 BOLA2Q9H3K6 86 aa11.02□□□□□ -0.65
CIRBP-218ENST00000588344 JAG2Q9Y219 1238 aa11.02□□□□□ -0.65
CIRBP-218ENST00000588344 SALL3Q9BXA9 1300 aa11.02□□□□□ -0.65
CIRBP-218ENST00000588344 SBF1O95248 1867 aa11.02□□□□□ -0.65
CIRBP-218ENST00000588344 SPEF2Q9C093 1822 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms