RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 TAF5LO75529 589 aa11.37□□□□□ -0.59
LINC01539-201ENST00000587904 PDE8BO95263 885 aa11.37□□□□□ -0.59
LINC01539-201ENST00000587904 KRT32Q14532 448 aa11.37□□□□□ -0.59
LINC01539-201ENST00000587904 PUM3Q15397 648 aaKnown RBP11.37□□□□□ -0.59
LINC01539-201ENST00000587904 KLHL40Q2TBA0 621 aa11.37□□□□□ -0.59
LINC01539-201ENST00000587904 VPS53Q5VIR6 699 aa11.37□□□□□ -0.59
LINC01539-201ENST00000587904 TNPO1Q92973 898 aaKnown RBP11.37□□□□□ -0.59
LINC01539-201ENST00000587904 ZSWIM6Q9HCJ5 1215 aa11.37□□□□□ -0.59
LINC01539-201ENST00000587904 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
LINC01539-201ENST00000587904 CASTP20810 708 aaKnown RBP11.37□□□□□ -0.59
LINC01539-201ENST00000587904 SSFA2P28290 1259 aa11.37□□□□□ -0.59
LINC01539-201ENST00000587904 ZMYM1Q5SVZ6 1142 aa11.37□□□□□ -0.59
LINC01539-201ENST00000587904 ZNF589Q86UQ0 364 aaPredicted RBP11.37□□□□□ -0.59
LINC01539-201ENST00000587904 FOXD4L1Q9NU39 408 aa11.37□□□□□ -0.59
LINC01539-201ENST00000587904 NARFQ9UHQ1 456 aa11.37□□□□□ -0.59
LINC01539-201ENST00000587904 CCNL1Q9UK58 526 aaPredicted RBP11.37□□□□□ -0.59
LINC01539-201ENST00000587904 CYP46A1Q9Y6A2 500 aa11.37□□□□□ -0.59
LINC01539-201ENST00000587904 SPDYE4A6NLX3 237 aa11.36□□□□□ -0.59
LINC01539-201ENST00000587904 SLC27A2O14975 620 aa11.36□□□□□ -0.59
LINC01539-201ENST00000587904 CYP2E1P05181 493 aaPredicted RBP11.36□□□□□ -0.59
LINC01539-201ENST00000587904 LPIN2Q92539 896 aa11.36□□□□□ -0.59
LINC01539-201ENST00000587904 JAKMIP1Q96N16 626 aaKnown RBP11.36□□□□□ -0.59
LINC01539-201ENST00000587904 NYXQ9GZU5 481 aa11.36□□□□□ -0.59
LINC01539-201ENST00000587904 LIMCH1Q9UPQ0 1083 aa11.36□□□□□ -0.59
LINC01539-201ENST00000587904 C4BP0C0L5 1744 aa11.36□□□□□ -0.59
LINC01539-201ENST00000587904 GOLGA6L22H0YM25 854 aa11.36□□□□□ -0.59
LINC01539-201ENST00000587904 RNF113AO15541 343 aaKnown RBP11.36□□□□□ -0.59
LINC01539-201ENST00000587904 UQCRFS1P1P0C7P4 283 aa11.36□□□□□ -0.59
LINC01539-201ENST00000587904 HCLS1P14317 486 aaPredicted RBP11.36□□□□□ -0.59
LINC01539-201ENST00000587904 HMGB2P26583 209 aaKnown RBP11.36□□□□□ -0.59
LINC01539-201ENST00000587904 ADORA1P30542 326 aa11.36□□□□□ -0.59
LINC01539-201ENST00000587904 IGHMBP2P38935 993 aaKnown RBP11.36□□□□□ -0.59
LINC01539-201ENST00000587904 RUFY3Q7L099 469 aa11.36□□□□□ -0.59
LINC01539-201ENST00000587904 ZSCAN31Q96LW9 406 aaPredicted RBP11.36□□□□□ -0.59
LINC01539-201ENST00000587904 CDC5LQ99459 802 aaKnown RBP11.36□□□□□ -0.59
LINC01539-201ENST00000587904 MPHOSPH8Q99549 860 aa11.36□□□□□ -0.59
LINC01539-201ENST00000587904 DSCC1Q9BVC3 393 aa11.36□□□□□ -0.59
LINC01539-201ENST00000587904 BCL2L12Q9HB09 334 aa11.36□□□□□ -0.59
LINC01539-201ENST00000587904 MYH7P12883 1935 aa11.35□□□□□ -0.59
LINC01539-201ENST00000587904 PATL2C9JE40 543 aaKnown RBP11.35□□□□□ -0.59
LINC01539-201ENST00000587904 ARID4AP29374 1257 aaPredicted RBP11.35□□□□□ -0.59
LINC01539-201ENST00000587904 ANKRD1Q15327 319 aa11.35□□□□□ -0.59
LINC01539-201ENST00000587904 TTF1Q15361 905 aaPredicted RBP11.35□□□□□ -0.59
LINC01539-201ENST00000587904 SYCP1Q15431 976 aa11.35□□□□□ -0.59
LINC01539-201ENST00000587904 ZSCAN25Q6NSZ9 544 aa11.35□□□□□ -0.59
LINC01539-201ENST00000587904 SEPT12Q8IYM1 358 aa11.35□□□□□ -0.59
LINC01539-201ENST00000587904 MYCBPQ99417 103 aaPredicted RBP11.35□□□□□ -0.59
LINC01539-201ENST00000587904 ALDH8A1Q9H2A2 487 aaPredicted RBP11.35□□□□□ -0.59
LINC01539-201ENST00000587904 SH2B1Q9NRF2 756 aaPredicted RBP11.35□□□□□ -0.59
LINC01539-201ENST00000587904 NDUFB9Q9Y6M9 179 aa11.35□□□□□ -0.59
LINC01539-201ENST00000587904 SLC5A1P13866 664 aa11.34□□□□□ -0.59
LINC01539-201ENST00000587904 FGFR2P21802 821 aa11.34□□□□□ -0.59
LINC01539-201ENST00000587904 AK2P54819 239 aa11.34□□□□□ -0.59
LINC01539-201ENST00000587904 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC01539-201ENST00000587904 PDRG1Q9NUG6 133 aa11.34□□□□□ -0.59
LINC01539-201ENST00000587904 FEZ2Q9UHY8 353 aaPredicted RBP11.34□□□□□ -0.59
LINC01539-201ENST00000587904 RTCBQ9Y3I0 505 aaKnown RBP11.34□□□□□ -0.59
LINC01539-201ENST00000587904 C4AP0C0L4 1744 aa11.34□□□□□ -0.59
LINC01539-201ENST00000587904 GNPATO15228 680 aa11.34□□□□□ -0.59
LINC01539-201ENST00000587904 FKBP4Q02790 459 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC01539-201ENST00000587904 SF3B3Q15393 1217 aaKnown RBP11.34□□□□□ -0.59
LINC01539-201ENST00000587904 TERF2Q15554 542 aa11.34□□□□□ -0.59
LINC01539-201ENST00000587904 SLC10A5Q5PT55 438 aa11.34□□□□□ -0.59
LINC01539-201ENST00000587904 ZGPATQ8N5A5 531 aaKnown RBP11.34□□□□□ -0.59
LINC01539-201ENST00000587904 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.34□□□□□ -0.59
LINC01539-201ENST00000587904 CASZ1Q86V15 1759 aa11.33□□□□□ -0.59
LINC01539-201ENST00000587904 AKAP11Q9UKA4 1901 aa11.33□□□□□ -0.59
LINC01539-201ENST00000587904 ZPR1O75312 459 aa11.33□□□□□ -0.6
LINC01539-201ENST00000587904 BLOC1S2Q6QNY1 142 aa11.33□□□□□ -0.6
LINC01539-201ENST00000587904 PTF1AQ7RTS3 328 aa11.33□□□□□ -0.6
LINC01539-201ENST00000587904 MAST3O60307 1309 aa11.33□□□□□ -0.6
LINC01539-201ENST00000587904 A0A1B0GUL6 1792 aa11.33□□□□□ -0.6
LINC01539-201ENST00000587904 FAM177BA6PVY3 158 aa11.32□□□□□ -0.6
LINC01539-201ENST00000587904 U2AF2P26368 475 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC01539-201ENST00000587904 ADCK5Q3MIX3 580 aa11.32□□□□□ -0.6
LINC01539-201ENST00000587904 POTEDQ86YR6 584 aa11.32□□□□□ -0.6
LINC01539-201ENST00000587904 NCAPGQ9BPX3 1015 aa11.32□□□□□ -0.6
LINC01539-201ENST00000587904 BRMS1Q9HCU9 246 aa11.32□□□□□ -0.6
LINC01539-201ENST00000587904 IGSF3O75054 1194 aa11.32□□□□□ -0.6
LINC01539-201ENST00000587904 HMGB1P09429 215 aaKnown RBP11.32□□□□□ -0.6
LINC01539-201ENST00000587904 RPS6KB1P23443 525 aa11.32□□□□□ -0.6
LINC01539-201ENST00000587904 MCAMP43121 646 aa11.32□□□□□ -0.6
LINC01539-201ENST00000587904 NBPF20Q3BBV1 942 aa11.32□□□□□ -0.6
LINC01539-201ENST00000587904 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
LINC01539-201ENST00000587904 APPBP2Q92624 585 aa11.32□□□□□ -0.6
LINC01539-201ENST00000587904 SETDB2Q96T68 719 aa11.32□□□□□ -0.6
LINC01539-201ENST00000587904 ZAP70P43403 619 aa11.31□□□□□ -0.6
LINC01539-201ENST00000587904 SCARF1Q14162 830 aa11.31□□□□□ -0.6
LINC01539-201ENST00000587904 ERFEQ4G0M1 354 aa11.31□□□□□ -0.6
LINC01539-201ENST00000587904 TBC1D9BQ66K14 1250 aa11.31□□□□□ -0.6
LINC01539-201ENST00000587904 CCDC129Q6ZRS4 1044 aa11.31□□□□□ -0.6
LINC01539-201ENST00000587904 FAM196AQ6ZSG2 479 aa11.31□□□□□ -0.6
LINC01539-201ENST00000587904 NOL8Q76FK4 1167 aaKnown RBP11.31□□□□□ -0.6
LINC01539-201ENST00000587904 BANK1Q8NDB2 785 aa11.31□□□□□ -0.6
LINC01539-201ENST00000587904 PIBF1Q8WXW3 757 aa11.31□□□□□ -0.6
LINC01539-201ENST00000587904 SEC62Q99442 399 aaKnown RBP11.31□□□□□ -0.6
LINC01539-201ENST00000587904 QTRT2Q9H974 415 aaKnown RBP11.31□□□□□ -0.6
LINC01539-201ENST00000587904 SEC31BQ9NQW1 1179 aa11.31□□□□□ -0.6
LINC01539-201ENST00000587904 MORC2Q9Y6X9 1032 aaPredicted RBP11.31□□□□□ -0.6
LINC01539-201ENST00000587904 DOCK2Q92608 1830 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms