RNA–Protein interactions for RNA: ENST00000586577.1

CNN1-205, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-205ENST00000586577 FXR1P51114 621 aaKnown RBP eCLIP16.2■□□□□ 0.18
CNN1-205ENST00000586577 IFIT5Q13325 482 aaKnown RBP16.2■□□□□ 0.18
CNN1-205ENST00000586577 RABL6Q3YEC7 729 aaPredicted RBP16.2■□□□□ 0.18
CNN1-205ENST00000586577 MKI67P46013 3256 aaKnown RBP16.2■□□□□ 0.18
CNN1-205ENST00000586577 ASTN2O75129 1339 aaPredicted RBP16.19■□□□□ 0.18
CNN1-205ENST00000586577 IRS2Q9Y4H2 1338 aa16.19■□□□□ 0.18
CNN1-205ENST00000586577 ATP2B4P23634 1241 aa16.19■□□□□ 0.18
CNN1-205ENST00000586577 CHRNDQ07001 517 aa16.19■□□□□ 0.18
CNN1-205ENST00000586577 RSBN1LQ6PCB5 846 aaPredicted RBP16.19■□□□□ 0.18
CNN1-205ENST00000586577 HELBQ8NG08 1087 aaPredicted RBP16.19■□□□□ 0.18
CNN1-205ENST00000586577 PUS3Q9BZE2 481 aaKnown RBP16.19■□□□□ 0.18
CNN1-205ENST00000586577 ZNF609O15014 1411 aa16.19■□□□□ 0.18
CNN1-205ENST00000586577 MED23Q9ULK4 1368 aa16.18■□□□□ 0.18
CNN1-205ENST00000586577 TAF5LO75529 589 aa16.18■□□□□ 0.18
CNN1-205ENST00000586577 USP17L8P0C7I0 530 aa16.18■□□□□ 0.18
CNN1-205ENST00000586577 TRIM27P14373 513 aa16.18■□□□□ 0.18
CNN1-205ENST00000586577 MPHOSPH8Q99549 860 aa16.18■□□□□ 0.18
CNN1-205ENST00000586577 API5Q9BZZ5 524 aaKnown RBP16.18■□□□□ 0.18
CNN1-205ENST00000586577 MYOZ2Q9NPC6 264 aa16.18■□□□□ 0.18
CNN1-205ENST00000586577 KIF16BQ96L93 1317 aa16.18■□□□□ 0.18
CNN1-205ENST00000586577 MOB2Q70IA6 237 aa16.17■□□□□ 0.18
CNN1-205ENST00000586577 KLHDC4Q8TBB5 520 aa16.17■□□□□ 0.18
CNN1-205ENST00000586577 MEIS3Q99687 375 aa16.17■□□□□ 0.18
CNN1-205ENST00000586577 TRIM17Q9Y577 477 aa16.17■□□□□ 0.18
CNN1-205ENST00000586577 INHBEP58166 350 aa16.16■□□□□ 0.18
CNN1-205ENST00000586577 MKRN3Q13064 507 aaKnown RBP16.16■□□□□ 0.18
CNN1-205ENST00000586577 CCDC57Q2TAC2 916 aa16.16■□□□□ 0.18
CNN1-205ENST00000586577 ARMC9Q7Z3E5 817 aa16.16■□□□□ 0.18
CNN1-205ENST00000586577 ARHGAP45Q92619 1136 aa16.16■□□□□ 0.18
CNN1-205ENST00000586577 FRAT1Q92837 279 aaPredicted RBP16.16■□□□□ 0.18
CNN1-205ENST00000586577 ZNF804BA4D1E1 1349 aa16.16■□□□□ 0.18
CNN1-205ENST00000586577 POTEFA5A3E0 1075 aa16.15■□□□□ 0.18
CNN1-205ENST00000586577 RFX5P48382 616 aaPredicted RBP16.15■□□□□ 0.18
CNN1-205ENST00000586577 LEMD3Q9Y2U8 911 aa16.15■□□□□ 0.18
CNN1-205ENST00000586577 RBBP6Q7Z6E9 1792 aaKnown RBP16.15■□□□□ 0.18
CNN1-205ENST00000586577 LRRC24Q50LG9 513 aa16.14■□□□□ 0.17
CNN1-205ENST00000586577 ATF7IPQ6VMQ6 1270 aa16.14■□□□□ 0.17
CNN1-205ENST00000586577 LDHAL6AQ6ZMR3 332 aa16.14■□□□□ 0.17
CNN1-205ENST00000586577 OTOP1Q7RTM1 612 aa16.14■□□□□ 0.17
CNN1-205ENST00000586577 OGFOD1Q8N543 542 aa16.14■□□□□ 0.17
CNN1-205ENST00000586577 CLUAP1Q96AJ1 413 aa16.14■□□□□ 0.17
CNN1-205ENST00000586577 ERO1AQ96HE7 468 aa16.14■□□□□ 0.17
CNN1-205ENST00000586577 ANKRD2Q9GZV1 360 aa16.14■□□□□ 0.17
CNN1-205ENST00000586577 TAF7LQ5H9L4 462 aa16.13■□□□□ 0.17
CNN1-205ENST00000586577 TMEM106CQ9BVX2 250 aa16.13■□□□□ 0.17
CNN1-205ENST00000586577 MXD3Q9BW11 206 aa16.13■□□□□ 0.17
CNN1-205ENST00000586577 RIPOR2Q9Y4F9 1068 aa16.13■□□□□ 0.17
CNN1-205ENST00000586577 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
CNN1-205ENST00000586577 CEP290O15078 2479 aa16.12■□□□□ 0.17
CNN1-205ENST00000586577 USP17L3A6NCW0 530 aa16.12■□□□□ 0.17
CNN1-205ENST00000586577 USP17L4A6NCW7 530 aa16.12■□□□□ 0.17
CNN1-205ENST00000586577 MANSC4A6NHS7 340 aaPredicted RBP16.12■□□□□ 0.17
CNN1-205ENST00000586577 PLIN1O60240 522 aa16.12■□□□□ 0.17
CNN1-205ENST00000586577 UBTFL1P0CB47 393 aaPredicted RBP16.12■□□□□ 0.17
CNN1-205ENST00000586577 PRAMEF18Q5VWM3 479 aa16.12■□□□□ 0.17
CNN1-205ENST00000586577 USP17L1Q7RTZ2 530 aa16.12■□□□□ 0.17
CNN1-205ENST00000586577 PODNQ7Z5L7 613 aa16.12■□□□□ 0.17
CNN1-205ENST00000586577 GMLQ99445 158 aa16.12■□□□□ 0.17
CNN1-205ENST00000586577 CNNM1Q9NRU3 951 aa16.12■□□□□ 0.17
CNN1-205ENST00000586577 CENPFP49454 3210 aa16.11■□□□□ 0.17
CNN1-205ENST00000586577 RLBP1P12271 317 aa16.11■□□□□ 0.17
CNN1-205ENST00000586577 MMP14P50281 582 aa16.11■□□□□ 0.17
CNN1-205ENST00000586577 SPRYD7Q5W111 196 aa16.11■□□□□ 0.17
CNN1-205ENST00000586577 OTUD7BQ6GQQ9 843 aa16.11■□□□□ 0.17
CNN1-205ENST00000586577 TMEM57Q8N5G2 664 aa16.11■□□□□ 0.17
CNN1-205ENST00000586577 VGLL2Q8N8G2 317 aa16.11■□□□□ 0.17
CNN1-205ENST00000586577 R3HDMLQ9H3Y0 253 aa16.11■□□□□ 0.17
CNN1-205ENST00000586577 TRIOBPQ9H2D6 2365 aa16.11■□□□□ 0.17
CNN1-205ENST00000586577 EN2P19622 333 aaPredicted RBP16.1■□□□□ 0.17
CNN1-205ENST00000586577 PTPN12Q05209 780 aaKnown RBP16.1■□□□□ 0.17
CNN1-205ENST00000586577 DACT2Q5SW24 774 aa16.1■□□□□ 0.17
CNN1-205ENST00000586577 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
CNN1-205ENST00000586577 C15orf52Q6ZUT6 534 aaKnown RBP16.1■□□□□ 0.17
CNN1-205ENST00000586577 IFNL1Q8IU54 200 aa16.1■□□□□ 0.17
CNN1-205ENST00000586577 ARMC5Q96C12 935 aa16.1■□□□□ 0.17
CNN1-205ENST00000586577 COA1Q9GZY4 146 aa16.1■□□□□ 0.17
CNN1-205ENST00000586577 SCAF8Q9UPN6 1271 aaKnown RBP16.1■□□□□ 0.17
CNN1-205ENST00000586577 COLQQ9Y215 455 aaPredicted RBP16.1■□□□□ 0.17
CNN1-205ENST00000586577 PTPN22Q9Y2R2 807 aa16.1■□□□□ 0.17
CNN1-205ENST00000586577 HTTP42858 3142 aa16.1■□□□□ 0.17
CNN1-205ENST00000586577 IPO8O15397 1037 aaKnown RBP16.09■□□□□ 0.17
CNN1-205ENST00000586577 KCNJ4P48050 445 aa16.09■□□□□ 0.17
CNN1-205ENST00000586577 NBPF9Q3BBW0 867 aa16.09■□□□□ 0.17
CNN1-205ENST00000586577 APOBEC3FQ8IUX4 373 aaKnown RBP16.09■□□□□ 0.17
CNN1-205ENST00000586577 EFCC1Q9HA90 598 aa16.09■□□□□ 0.17
CNN1-205ENST00000586577 CD209Q9NNX6 404 aa16.09■□□□□ 0.17
CNN1-205ENST00000586577 ZBTB48P10074 688 aaPredicted RBP16.08■□□□□ 0.16
CNN1-205ENST00000586577 ARHGEF6Q15052 776 aa16.08■□□□□ 0.16
CNN1-205ENST00000586577 ATG9AQ7Z3C6 839 aa16.08■□□□□ 0.16
CNN1-205ENST00000586577 NBPF11Q86T75 865 aa16.08■□□□□ 0.16
CNN1-205ENST00000586577 SLC10A4Q96EP9 437 aa16.08■□□□□ 0.16
CNN1-205ENST00000586577 ANGEL1Q9UNK9 670 aaKnown RBP16.08■□□□□ 0.16
CNN1-205ENST00000586577 PA2G4Q9UQ80 394 aaKnown RBP16.08■□□□□ 0.16
CNN1-205ENST00000586577 MYO3BQ8WXR4 1341 aa16.08■□□□□ 0.16
CNN1-205ENST00000586577 WNT10BO00744 389 aa16.07■□□□□ 0.16
CNN1-205ENST00000586577 PRKG1Q13976 671 aa16.07■□□□□ 0.16
CNN1-205ENST00000586577 LDLRAD1Q5T700 205 aa16.07■□□□□ 0.16
CNN1-205ENST00000586577 CERS5Q8N5B7 392 aa16.07■□□□□ 0.16
CNN1-205ENST00000586577 MROH5Q6ZUA9 1318 aa16.06■□□□□ 0.16
CNN1-205ENST00000586577 EYA2O00167 538 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms