RNA–Protein interactions for RNA: ENST00000586569.2

TNFRSF11A-202, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 8,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-202ENST00000586569 SPAG1Q07617 926 aa16.48■□□□□ 0.23
TNFRSF11A-202ENST00000586569 ZNF622Q969S3 477 aaKnown RBP eCLIP16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 NAPAP54920 295 aa16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 RNASE9P60153 205 aaKnown RBP16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 F6X3S4 739 aa16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 MIER3Q7Z3K6 550 aa16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 NECAB1Q8N987 351 aa16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 RABEP2Q9H5N1 569 aa16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 TRPC3Q13507 836 aa16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 RTN1Q16799 776 aa16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 RNF10Q8N5U6 811 aaKnown RBP16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 ZBTB43O43298 467 aa16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 NAA16Q6N069 864 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 SMARCC2Q8TAQ2 1214 aa16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 TMPOP42166 694 aaKnown RBP16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 DNAJC25Q9H1X3 360 aa16.47■□□□□ 0.23
TNFRSF11A-202ENST00000586569 KLF18A0A0U1RQI7 1052 aa16.46■□□□□ 0.23
TNFRSF11A-202ENST00000586569 SPDYE3A6NKU9 549 aa16.46■□□□□ 0.23
TNFRSF11A-202ENST00000586569 RTEL1-TNFRSF6BF6WH68 1400 aa16.46■□□□□ 0.23
TNFRSF11A-202ENST00000586569 SYT10Q6XYQ8 523 aa16.46■□□□□ 0.23
TNFRSF11A-202ENST00000586569 HS2ST1Q7LGA3 356 aa16.46■□□□□ 0.23
TNFRSF11A-202ENST00000586569 ARHGAP24Q8N264 748 aa16.46■□□□□ 0.23
TNFRSF11A-202ENST00000586569 RILPQ96NA2 401 aa16.46■□□□□ 0.23
TNFRSF11A-202ENST00000586569 ARHGAP5Q13017 1502 aa16.46■□□□□ 0.23
TNFRSF11A-202ENST00000586569 CCDC38Q502W7 563 aa16.46■□□□□ 0.22
TNFRSF11A-202ENST00000586569 LRRC2Q9BYS8 371 aa16.46■□□□□ 0.22
TNFRSF11A-202ENST00000586569 SPECC1L-ADORA2AF8WAN1 911 aa16.46■□□□□ 0.22
TNFRSF11A-202ENST00000586569 STX17P56962 302 aa16.46■□□□□ 0.22
TNFRSF11A-202ENST00000586569 NBPF8Q3BBV2 869 aa16.46■□□□□ 0.22
TNFRSF11A-202ENST00000586569 CASC4Q6P4E1 433 aa16.46■□□□□ 0.22
TNFRSF11A-202ENST00000586569 GABPB2Q8TAK5 448 aaPredicted RBP16.46■□□□□ 0.22
TNFRSF11A-202ENST00000586569 THUMPD2Q9BTF0 503 aaKnown RBP16.46■□□□□ 0.22
TNFRSF11A-202ENST00000586569 NDUFAB1O14561 156 aa16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 SPOPO43791 374 aa16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 CDC5LQ99459 802 aaKnown RBP16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 STK10O94804 968 aaKnown RBP16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 INPP5BP32019 993 aa16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 USH1CQ9Y6N9 552 aa16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 STX10O60499 249 aa16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 BMP15O95972 392 aa16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 ZSCAN22P10073 491 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 MX2P20592 715 aa16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 COG7P83436 770 aa16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 MRPL46Q9H2W6 279 aaKnown RBP16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 PTPRGP23470 1445 aa16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 CNGA1P29973 690 aa16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 MAN1A1P33908 653 aa16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 SP4Q02446 784 aa16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 LDHAL6AQ6ZMR3 332 aa16.45■□□□□ 0.22
TNFRSF11A-202ENST00000586569 F8W031 263 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 SRGAP1Q7Z6B7 1085 aa16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 VSIG1Q86XK7 387 aa16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 GBP5Q96PP8 586 aa16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 I3L4J1 428 aa16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 UBE2Q2Q8WVN8 375 aa16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 KIFAP3Q92845 792 aa16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 VCX3AQ9NNX9 186 aa16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 RTL1A6NKG5 1358 aa16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 ZMAT2Q96NC0 199 aaKnown RBP16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 STK38LQ9Y2H1 464 aa16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 MYOM3Q5VTT5 1437 aa16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 OPHN1O60890 802 aa16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 PSPC1Q8WXF1 523 aaKnown RBP16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 TTLL3Q9Y4R7 772 aa16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 KRT23Q9C075 422 aa16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 NACADO15069 1562 aa16.44■□□□□ 0.22
TNFRSF11A-202ENST00000586569 SLC8A3P57103 927 aa16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 GSTO1P78417 241 aa16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 KMT5BQ4FZB7 885 aa16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 TSHZ3Q63HK5 1081 aa16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 RPS6KA2Q15349 733 aa16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 UTP14CQ5TAP6 766 aaKnown RBP16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 USP48Q86UV5 1035 aa16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 CCDC94Q9BW85 323 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 HARSP12081 509 aaKnown RBP16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 RFX1P22670 979 aa16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 PICALMQ13492 652 aa16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 TBC1D9Q6ZT07 1266 aa16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 HMG20BQ9P0W2 317 aa16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 DDX21Q9NR30 783 aaKnown RBP eCLIP16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 TAOK1Q7L7X3 1001 aa16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 MRPS27Q92552 414 aaKnown RBP16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 WDR44Q5JSH3 913 aa16.43■□□□□ 0.22
TNFRSF11A-202ENST00000586569 GIGYF1O75420 1035 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF11A-202ENST00000586569 RILPL1Q5EBL4 403 aa16.42■□□□□ 0.22
TNFRSF11A-202ENST00000586569 PPP2R3AQ06190 1150 aa16.42■□□□□ 0.22
TNFRSF11A-202ENST00000586569 HHATQ5VTY9 493 aa16.42■□□□□ 0.22
TNFRSF11A-202ENST00000586569 PNMA8AQ86V59 439 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF11A-202ENST00000586569 PLIN2Q99541 437 aa16.42■□□□□ 0.22
TNFRSF11A-202ENST00000586569 TRIM68Q6AZZ1 485 aa16.42■□□□□ 0.22
TNFRSF11A-202ENST00000586569 CLEC11AQ9Y240 323 aa16.42■□□□□ 0.22
TNFRSF11A-202ENST00000586569 ACTN4O43707 911 aaKnown RBP16.42■□□□□ 0.22
TNFRSF11A-202ENST00000586569 WHAMMP3Q1A5X7 153 aa16.42■□□□□ 0.22
TNFRSF11A-202ENST00000586569 MAP3K2Q9Y2U5 619 aa16.42■□□□□ 0.22
TNFRSF11A-202ENST00000586569 CCT6AP40227 531 aaKnown RBP16.42■□□□□ 0.22
TNFRSF11A-202ENST00000586569 USHBP1Q8N6Y0 703 aa16.42■□□□□ 0.22
TNFRSF11A-202ENST00000586569 NACA2Q9H009 215 aa16.42■□□□□ 0.22
TNFRSF11A-202ENST00000586569 POLA1P09884 1462 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF11A-202ENST00000586569 CUX1P39880 1505 aa16.41■□□□□ 0.22
TNFRSF11A-202ENST00000586569 MUM1Q2TAK8 710 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms