RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 FBXW7Q969H0 707 aa23.51■■□□□ 1.35
DDX39A-204ENST00000586558 GPBP1L1Q9HC44 474 aaPredicted RBP23.51■■□□□ 1.35
DDX39A-204ENST00000586558 PDS5AQ29RF7 1337 aaKnown RBP23.51■■□□□ 1.35
DDX39A-204ENST00000586558 IGHDP01880 384 aa23.5■■□□□ 1.35
DDX39A-204ENST00000586558 ARID4AP29374 1257 aaPredicted RBP23.5■■□□□ 1.35
DDX39A-204ENST00000586558 LMOD1P29536 600 aaPredicted RBP23.5■■□□□ 1.35
DDX39A-204ENST00000586558 ZNF784Q8NCA9 323 aaPredicted RBP23.5■■□□□ 1.35
DDX39A-204ENST00000586558 TBC1D22AQ8WUA7 517 aa23.5■■□□□ 1.35
DDX39A-204ENST00000586558 ZNF512BQ96KM6 892 aaPredicted RBP23.5■■□□□ 1.35
DDX39A-204ENST00000586558 CCDC8Q9H0W5 538 aaPredicted RBP23.5■■□□□ 1.35
DDX39A-204ENST00000586558 ZBTB47Q9UFB7 747 aaPredicted RBP23.5■■□□□ 1.35
DDX39A-204ENST00000586558 DENND2AQ9ULE3 1009 aa23.5■■□□□ 1.35
DDX39A-204ENST00000586558 IQSEC3Q9UPP2 1182 aaPredicted RBP23.5■■□□□ 1.35
DDX39A-204ENST00000586558 VEGFAP15692 232 aaPredicted RBP23.49■■□□□ 1.35
DDX39A-204ENST00000586558 SCNN1DP51172 638 aa23.49■■□□□ 1.35
DDX39A-204ENST00000586558 GMLQ99445 158 aa23.49■■□□□ 1.35
DDX39A-204ENST00000586558 TLR7Q9NYK1 1049 aaKnown RBP23.49■■□□□ 1.35
DDX39A-204ENST00000586558 GPRC5DQ9NZD1 345 aa23.49■■□□□ 1.35
DDX39A-204ENST00000586558 SMARCA5O60264 1052 aaPredicted RBP23.48■■□□□ 1.35
DDX39A-204ENST00000586558 MMP14P50281 582 aa23.48■■□□□ 1.35
DDX39A-204ENST00000586558 RASGRF1Q13972 1273 aa23.48■■□□□ 1.35
DDX39A-204ENST00000586558 TTC39AQ5SRH9 613 aa23.48■■□□□ 1.35
DDX39A-204ENST00000586558 WDR66Q8TBY9 1149 aa23.48■■□□□ 1.35
DDX39A-204ENST00000586558 HACL1Q9UJ83 578 aa23.48■■□□□ 1.35
DDX39A-204ENST00000586558 ZBTB12Q9Y330 459 aaPredicted RBP23.48■■□□□ 1.35
DDX39A-204ENST00000586558 ZNF646O15015 1829 aaPredicted RBP23.47■■□□□ 1.35
DDX39A-204ENST00000586558 CHAF1AQ13111 956 aaPredicted RBP23.47■■□□□ 1.35
DDX39A-204ENST00000586558 MFSD14BQ5SR56 506 aa23.47■■□□□ 1.35
DDX39A-204ENST00000586558 ERICH6BQ5W0A0 696 aa23.47■■□□□ 1.35
DDX39A-204ENST00000586558 NMRK2Q9NPI5 230 aa23.47■■□□□ 1.35
DDX39A-204ENST00000586558 COL1A1P02452 1464 aaPredicted RBP23.47■■□□□ 1.35
DDX39A-204ENST00000586558 ANKRD45Q5TZF3 282 aa23.46■■□□□ 1.35
DDX39A-204ENST00000586558 SCN4AP35499 1836 aa23.45■■□□□ 1.34
DDX39A-204ENST00000586558 SALL1Q9NSC2 1324 aa23.45■■□□□ 1.34
DDX39A-204ENST00000586558 POTECB2RU33 542 aa23.45■■□□□ 1.34
DDX39A-204ENST00000586558 CERS5Q8N5B7 392 aa23.45■■□□□ 1.34
DDX39A-204ENST00000586558 RRAGCQ9HB90 399 aa23.45■■□□□ 1.34
DDX39A-204ENST00000586558 CNOT7Q9UIV1 285 aaKnown RBP23.45■■□□□ 1.34
DDX39A-204ENST00000586558 JAG2Q9Y219 1238 aa23.45■■□□□ 1.34
DDX39A-204ENST00000586558 SUGT1Q9Y2Z0 365 aa23.45■■□□□ 1.34
DDX39A-204ENST00000586558 H7C1D1 291 aa23.44■■□□□ 1.34
DDX39A-204ENST00000586558 USP17L8P0C7I0 530 aa23.44■■□□□ 1.34
DDX39A-204ENST00000586558 MICALL2Q8IY33 904 aa23.44■■□□□ 1.34
DDX39A-204ENST00000586558 OGFOD1Q8N543 542 aa23.44■■□□□ 1.34
DDX39A-204ENST00000586558 ZGPATQ8N5A5 531 aaKnown RBP23.44■■□□□ 1.34
DDX39A-204ENST00000586558 SPATA5Q8NB90 893 aa23.44■■□□□ 1.34
DDX39A-204ENST00000586558 GPATCH3Q96I76 525 aa23.44■■□□□ 1.34
DDX39A-204ENST00000586558 MXD3Q9BW11 206 aa23.44■■□□□ 1.34
DDX39A-204ENST00000586558 HMG20BQ9P0W2 317 aa23.44■■□□□ 1.34
DDX39A-204ENST00000586558 EPHX2P34913 555 aa23.43■■□□□ 1.34
DDX39A-204ENST00000586558 EPS15P42566 896 aa23.43■■□□□ 1.34
DDX39A-204ENST00000586558 MCAMP43121 646 aa23.43■■□□□ 1.34
DDX39A-204ENST00000586558 ZNF280AP59817 542 aaPredicted RBP23.43■■□□□ 1.34
DDX39A-204ENST00000586558 BCL11AQ9H165 835 aa23.43■■□□□ 1.34
DDX39A-204ENST00000586558 TAF1DQ9H5J8 278 aaPredicted RBP23.43■■□□□ 1.34
DDX39A-204ENST00000586558 ADARB2Q9NS39 739 aaKnown RBP23.43■■□□□ 1.34
DDX39A-204ENST00000586558 MYH13Q9UKX3 1938 aa23.42■■□□□ 1.34
DDX39A-204ENST00000586558 PNMA8AQ86V59 439 aaPredicted RBP23.42■■□□□ 1.34
DDX39A-204ENST00000586558 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.42■■□□□ 1.34
DDX39A-204ENST00000586558 HDAC9Q9UKV0 1011 aa23.42■■□□□ 1.34
DDX39A-204ENST00000586558 NUCB1Q02818 461 aa23.41■■□□□ 1.34
DDX39A-204ENST00000586558 SCARF1Q14162 830 aa23.41■■□□□ 1.34
DDX39A-204ENST00000586558 KIAA0825Q8IV33 1275 aa23.41■■□□□ 1.34
DDX39A-204ENST00000586558 MAST3O60307 1309 aa23.4■■□□□ 1.34
DDX39A-204ENST00000586558 ATP5JP18859 108 aa23.4■■□□□ 1.34
DDX39A-204ENST00000586558 SPTY2D1Q68D10 685 aaPredicted RBP23.4■■□□□ 1.34
DDX39A-204ENST00000586558 USP50Q70EL3 339 aaPredicted RBP23.4■■□□□ 1.34
DDX39A-204ENST00000586558 ECHDC1Q9NTX5 307 aa23.4■■□□□ 1.34
DDX39A-204ENST00000586558 B4GALNT3Q6L9W6 998 aa23.39■■□□□ 1.33
DDX39A-204ENST00000586558 PI16Q6UXB8 463 aa23.39■■□□□ 1.33
DDX39A-204ENST00000586558 CHD1LQ86WJ1 897 aa23.39■■□□□ 1.33
DDX39A-204ENST00000586558 TTC41PQ6P2S7 1318 aa23.38■■□□□ 1.33
DDX39A-204ENST00000586558 KIF3CO14782 793 aa23.38■■□□□ 1.33
DDX39A-204ENST00000586558 IGSF3O75054 1194 aa23.38■■□□□ 1.33
DDX39A-204ENST00000586558 LDHBP07195 334 aaKnown RBP23.38■■□□□ 1.33
DDX39A-204ENST00000586558 C16orf71Q8IYS4 520 aaPredicted RBP23.38■■□□□ 1.33
DDX39A-204ENST00000586558 TTF2Q9UNY4 1162 aaKnown RBP23.38■■□□□ 1.33
DDX39A-204ENST00000586558 SHTN1A0MZ66 631 aa23.37■■□□□ 1.33
DDX39A-204ENST00000586558 HDLBPQ00341 1268 aaKnown RBP23.37■■□□□ 1.33
DDX39A-204ENST00000586558 CENPQQ7L2Z9 268 aaPredicted RBP23.37■■□□□ 1.33
DDX39A-204ENST00000586558 CCDC136Q96JN2 1154 aa23.37■■□□□ 1.33
DDX39A-204ENST00000586558 LNPKQ9C0E8 428 aa23.37■■□□□ 1.33
DDX39A-204ENST00000586558 MYOZ2Q9NPC6 264 aa23.37■■□□□ 1.33
DDX39A-204ENST00000586558 SNRKQ9NRH2 765 aa23.37■■□□□ 1.33
DDX39A-204ENST00000586558 F8W031 263 aaPredicted RBP23.36■■□□□ 1.33
DDX39A-204ENST00000586558 MX1P20591 662 aa23.36■■□□□ 1.33
DDX39A-204ENST00000586558 ZAP70P43403 619 aa23.36■■□□□ 1.33
DDX39A-204ENST00000586558 KIF4BQ2VIQ3 1234 aa23.36■■□□□ 1.33
DDX39A-204ENST00000586558 MRIQ9BWK5 157 aa23.36■■□□□ 1.33
DDX39A-204ENST00000586558 ABCF2Q9UG63 623 aa23.36■■□□□ 1.33
DDX39A-204ENST00000586558 SERPINA10Q9UK55 444 aa23.36■■□□□ 1.33
DDX39A-204ENST00000586558 SALL3Q9BXA9 1300 aa23.35■■□□□ 1.33
DDX39A-204ENST00000586558 ERC2O15083 957 aa23.35■■□□□ 1.33
DDX39A-204ENST00000586558 CYP2E1P05181 493 aaPredicted RBP23.35■■□□□ 1.33
DDX39A-204ENST00000586558 PRDX5P30044 214 aa23.35■■□□□ 1.33
DDX39A-204ENST00000586558 GRIK5Q16478 980 aa23.35■■□□□ 1.33
DDX39A-204ENST00000586558 TBC1D10BQ4KMP7 808 aaPredicted RBP23.35■■□□□ 1.33
DDX39A-204ENST00000586558 SAMD7Q7Z3H4 446 aa23.35■■□□□ 1.33
DDX39A-204ENST00000586558 MTMR14Q8NCE2 650 aa23.35■■□□□ 1.33
DDX39A-204ENST00000586558 TRPM4Q8TD43 1214 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms