RNA–Protein interactions for RNA: ENST00000586001.1

ATP6V0A1-208, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-208	ENST00000586001	SF3B2	Q13435	895 aa	Known RBP	10.89	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	TPSG1	Q9NRR2	321 aa		10.89	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	TMEM63C	Q9P1W3	806 aa		10.89	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	FAM13A	O94988	1023 aa		10.88	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	MTMR3	Q13615	1198 aa		10.88	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	GDF6	Q6KF10	455 aa	Predicted RBP	10.88	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	ZNF438	Q7Z4V0	828 aa		10.88	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	TXNRD3	Q86VQ6	643 aa		10.88	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	IL22RA1	Q8N6P7	574 aa		10.88	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	SPACA7	Q96KW9	195 aa		10.88	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	GGNBP2	Q9H3C7	697 aa		10.88	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	SRA1	Q9HD15	236 aa	Known RBP	10.88	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	ZFYVE16	Q7Z3T8	1539 aa		10.88	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	C9orf84	Q5VXU9	1444 aa		10.87	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	NKAPL	Q5M9Q1	402 aa		10.87	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	B4GALNT3	Q6L9W6	998 aa		10.87	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	IGF2-AS	Q6U949	168 aa		10.87	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	TRIM33	Q9UPN9	1127 aa		10.87	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	IQSEC2	Q5JU85	1478 aa		10.87	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	ZNF518A	Q6AHZ1	1483 aa		10.87	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	SCAPER	Q9BY12	1400 aa		10.86	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	DLL1	O00548	723 aa		10.86	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	CYP2E1	P05181	493 aa	Predicted RBP	10.86	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	RSPO4	Q2I0M5	234 aa	Predicted RBP	10.86	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	MAP4K3	Q8IVH8	894 aa		10.86	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	CEP120	Q8N960	986 aa		10.86	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	MUC3B	Q9H195	1237 aa		10.86	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	CNTN3	Q9P232	1028 aa		10.86	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	MADD	Q8WXG6	1647 aa		10.85	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	ATP11A	P98196	1134 aa		10.85	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	USP21	Q9UK80	565 aa		10.85	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	FRMPD1	Q5SYB0	1578 aa		10.85	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	PTPRT	O14522	1441 aa		10.84	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	CLIP1	P30622	1438 aa		10.84	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	CNTLN	Q9NXG0	1405 aa		10.84	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	SMNDC1	O75940	238 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	TTC16	Q8NEE8	873 aa		10.84	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	PBX4	Q9BYU1	374 aa		10.84	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	UHRF1BP1	Q6BDS2	1440 aa		10.84	□□□□□ -0.67
ATP6V0A1-208	ENST00000586001	TTC37	Q6PGP7	1564 aa		10.83	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	ITGB7	P26010	798 aa		10.83	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	NCAPG2	Q86XI2	1143 aa		10.83	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	C1orf127	Q8N9H9	656 aa		10.83	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	DCAF11	Q8TEB1	546 aa		10.83	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	RASSF4	Q9H2L5	321 aa		10.83	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	EGFL7	Q9UHF1	273 aa		10.83	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	SALL4	Q9UJQ4	1053 aa		10.83	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	POLI	Q9UNA4	740 aa		10.83	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	PPME1	Q9Y570	386 aa		10.83	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	RICTOR	Q6R327	1708 aa		10.83	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	ARHGEF12	Q9NZN5	1544 aa		10.83	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	USP5	P45974	858 aa		10.82	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	SETDB1	Q15047	1291 aa		10.82	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	C8orf34	Q49A92	452 aa		10.82	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	CEP135	Q66GS9	1140 aa		10.82	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	PMEPA1	Q969W9	287 aa		10.82	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.82	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	SEMA6B	Q9H3T3	888 aa		10.82	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	SETD1B	Q9UPS6	1966 aa	Known RBP	10.82	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	RERE	Q9P2R6	1566 aa		10.82	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	FZD6	O60353	706 aa		10.81	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	ARID3A	Q99856	593 aa		10.81	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	CHRD	Q9H2X0	955 aa		10.81	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	MLH3	Q9UHC1	1453 aa		10.81	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001		A6NHS1	94 aa		10.8	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	ABL1	P00519	1130 aa		10.8	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	CES1	P23141	567 aa		10.8	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	EHHADH	Q08426	723 aa		10.8	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	WFDC12	Q8WWY7	111 aa		10.8	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	KANSL3	Q9P2N6	904 aa		10.8	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	TRAPPC8	Q9Y2L5	1435 aa		10.8	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	AGL	P35573	1532 aa		10.79	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	H2AFB1	P0C5Y9	115 aa		10.79	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	H2AFB2	P0C5Z0	115 aa		10.79	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	CDC27	P30260	824 aa		10.79	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	HSPA2	P54652	639 aa		10.79	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	ZNF211	Q13398	564 aa	Predicted RBP	10.79	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	AAMP	Q13685	434 aa		10.79	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	TMEM130	Q8N3G9	435 aa		10.79	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	TIMELESS	Q9UNS1	1208 aa		10.79	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.79	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	NPAT	Q14207	1427 aa		10.78	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	DYRK3	O43781	588 aa		10.78	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	ICMT	O60725	284 aa		10.78	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	NOS3	P29474	1203 aa		10.78	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	ADAMTSL4	Q6UY14	1074 aa		10.78	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	GJD3	Q8N144	294 aa		10.78	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	POP1	Q99575	1024 aa	Known RBP	10.78	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	LACRT	Q9GZZ8	138 aa		10.78	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	ADAM19	Q9H013	955 aa		10.78	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	MRPL18	Q9H0U6	180 aa	Known RBP	10.78	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	ANO2	Q9NQ90	1003 aa		10.78	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	HECW1	Q76N89	1606 aa		10.77	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	TRO	Q12816	1431 aa	Predicted RBP	10.77	□□□□□ -0.68
ATP6V0A1-208	ENST00000586001	RIMS1	Q86UR5	1692 aa	Known RBP	10.77	□□□□□ -0.69
ATP6V0A1-208	ENST00000586001	TNFRSF21	O75509	655 aa		10.77	□□□□□ -0.69
ATP6V0A1-208	ENST00000586001	PTPRA	P18433	802 aa		10.77	□□□□□ -0.69
ATP6V0A1-208	ENST00000586001	NFKBIE	O00221	500 aa		10.76	□□□□□ -0.69

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